RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 RHBDD1Q8TEB9 315 aa9.3□□□□□ -0.92
FOXN3-206ENST00000554005 EML1O00423 815 aa9.29□□□□□ -0.92
FOXN3-206ENST00000554005 ST8SIA5O15466 376 aa9.29□□□□□ -0.92
FOXN3-206ENST00000554005 TEAD4Q15561 434 aa9.29□□□□□ -0.92
FOXN3-206ENST00000554005 SH3PXD2AQ5TCZ1 1133 aa9.29□□□□□ -0.92
FOXN3-206ENST00000554005 CABP1Q9NZU7 370 aa9.29□□□□□ -0.92
FOXN3-206ENST00000554005 MTMR7Q9Y216 660 aa9.29□□□□□ -0.92
FOXN3-206ENST00000554005 SERTM1A2A2V5 107 aa9.28□□□□□ -0.92
FOXN3-206ENST00000554005 GTF2E1P29083 439 aaPredicted RBP9.28□□□□□ -0.92
FOXN3-206ENST00000554005 NOS2P35228 1153 aa9.28□□□□□ -0.92
FOXN3-206ENST00000554005 HIRAP54198 1017 aaPredicted RBP9.28□□□□□ -0.92
FOXN3-206ENST00000554005 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
FOXN3-206ENST00000554005 VTI1AQ96AJ9 217 aa9.28□□□□□ -0.92
FOXN3-206ENST00000554005 NIFKQ9BYG3 293 aaKnown RBP9.28□□□□□ -0.92
FOXN3-206ENST00000554005 AAASQ9NRG9 546 aa9.28□□□□□ -0.92
FOXN3-206ENST00000554005 CHMP3Q9Y3E7 222 aa9.28□□□□□ -0.92
FOXN3-206ENST00000554005 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
FOXN3-206ENST00000554005 SPATA31C2B4DYI2 1134 aa9.27□□□□□ -0.93
FOXN3-206ENST00000554005 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
FOXN3-206ENST00000554005 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
FOXN3-206ENST00000554005 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
FOXN3-206ENST00000554005 ZFP42Q96MM3 310 aa9.27□□□□□ -0.93
FOXN3-206ENST00000554005 IRX2Q9BZI1 471 aaPredicted RBP9.27□□□□□ -0.93
FOXN3-206ENST00000554005 ZNF232Q9UNY5 417 aa9.27□□□□□ -0.93
FOXN3-206ENST00000554005 PARP3Q9Y6F1 533 aa9.27□□□□□ -0.93
FOXN3-206ENST00000554005 SOS2Q07890 1332 aaPredicted RBP9.27□□□□□ -0.93
FOXN3-206ENST00000554005 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
FOXN3-206ENST00000554005 ABL1P00519 1130 aa9.25□□□□□ -0.93
FOXN3-206ENST00000554005 PLA2G4AP47712 749 aa9.25□□□□□ -0.93
FOXN3-206ENST00000554005 ZNF211Q13398 564 aaPredicted RBP9.25□□□□□ -0.93
FOXN3-206ENST00000554005 SND1Q7KZF4 910 aaKnown RBP eCLIP9.25□□□□□ -0.93
FOXN3-206ENST00000554005 LYSMD3Q7Z3D4 306 aa9.25□□□□□ -0.93
FOXN3-206ENST00000554005 PRICKLE2Q7Z3G6 844 aa9.25□□□□□ -0.93
FOXN3-206ENST00000554005 QTRT2Q9H974 415 aaKnown RBP9.25□□□□□ -0.93
FOXN3-206ENST00000554005 ATP13A2Q9NQ11 1180 aa9.25□□□□□ -0.93
FOXN3-206ENST00000554005 EGFL7Q9UHF1 273 aa9.25□□□□□ -0.93
FOXN3-206ENST00000554005 DNMT3AQ9Y6K1 912 aaPredicted RBP9.25□□□□□ -0.93
FOXN3-206ENST00000554005 SOWAHDA6NJG2 315 aa9.24□□□□□ -0.93
FOXN3-206ENST00000554005 POU4F2Q12837 409 aa9.24□□□□□ -0.93
FOXN3-206ENST00000554005 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
FOXN3-206ENST00000554005 SAP130Q9H0E3 1048 aa9.24□□□□□ -0.93
FOXN3-206ENST00000554005 DACH1Q9UI36 760 aa9.24□□□□□ -0.93
FOXN3-206ENST00000554005 FIGNL2A6NMB9 653 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 TXLNAP40222 546 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 PHKA2P46019 1235 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 C16orf46Q6P387 395 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 NGLY1Q96IV0 654 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 ANO2Q9NQ90 1003 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.23□□□□□ -0.931e-7■■■■■ 115.4
FOXN3-206ENST00000554005 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 HCN4Q9Y3Q4 1203 aa9.23□□□□□ -0.93
FOXN3-206ENST00000554005 RHOQP17081 205 aa9.22□□□□□ -0.93
FOXN3-206ENST00000554005 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
FOXN3-206ENST00000554005 COX20Q5RI15 118 aa9.22□□□□□ -0.93
FOXN3-206ENST00000554005 ALDH16A1Q8IZ83 802 aa9.22□□□□□ -0.93
FOXN3-206ENST00000554005 HELQQ8TDG4 1101 aa9.22□□□□□ -0.93
FOXN3-206ENST00000554005 MYO19Q96H55 970 aa9.22□□□□□ -0.93
FOXN3-206ENST00000554005 PHACTR1Q9C0D0 580 aa9.22□□□□□ -0.93
FOXN3-206ENST00000554005 H3BRB1 525 aa9.21□□□□□ -0.94
FOXN3-206ENST00000554005 ICMTO60725 284 aa9.21□□□□□ -0.94
FOXN3-206ENST00000554005 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
FOXN3-206ENST00000554005 TMCO4Q5TGY1 634 aa9.21□□□□□ -0.94
FOXN3-206ENST00000554005 TUT1Q9H6E5 874 aaKnown RBP9.21□□□□□ -0.94
FOXN3-206ENST00000554005 SF3B2Q13435 895 aaKnown RBP9.2□□□□□ -0.94
FOXN3-206ENST00000554005 RTN1Q16799 776 aa9.2□□□□□ -0.94
FOXN3-206ENST00000554005 NBPF1Q3BBV0 1214 aa9.2□□□□□ -0.94
FOXN3-206ENST00000554005 C1orf53Q5VUE5 145 aa9.2□□□□□ -0.94
FOXN3-206ENST00000554005 ZDHHC3Q9NYG2 299 aa9.2□□□□□ -0.94
FOXN3-206ENST00000554005 LRFN2Q9ULH4 789 aa9.2□□□□□ -0.94
FOXN3-206ENST00000554005 TNFRSF10BO14763 440 aa9.19□□□□□ -0.94
FOXN3-206ENST00000554005 FKBP4Q02790 459 aaKnown RBP eCLIP9.19□□□□□ -0.94
FOXN3-206ENST00000554005 AIDAQ96BJ3 306 aa9.19□□□□□ -0.94
FOXN3-206ENST00000554005 ATP4AP20648 1035 aa9.18□□□□□ -0.94
FOXN3-206ENST00000554005 GLYCTKQ8IVS8 523 aa9.18□□□□□ -0.94
FOXN3-206ENST00000554005 TIMMDC1Q9NPL8 285 aa9.18□□□□□ -0.94
FOXN3-206ENST00000554005 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
FOXN3-206ENST00000554005 MAN1A2O60476 641 aa9.17□□□□□ -0.94
FOXN3-206ENST00000554005 ECM1Q16610 540 aa9.17□□□□□ -0.94
FOXN3-206ENST00000554005 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.17□□□□□ -0.94
FOXN3-206ENST00000554005 C7orf43Q8WVR3 580 aa9.17□□□□□ -0.94
FOXN3-206ENST00000554005 CCDC9Q9Y3X0 531 aaKnown RBP9.17□□□□□ -0.94
FOXN3-206ENST00000554005 NISCHQ9Y2I1 1504 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 NPR3P17342 541 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
FOXN3-206ENST00000554005 MPSTP25325 297 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 DGKZQ13574 1117 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 KLRG1Q96E93 195 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 KLK14Q9P0G3 267 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 STIM2Q9P246 746 aa9.16□□□□□ -0.94
FOXN3-206ENST00000554005 BIN2Q9UBW5 565 aaPredicted RBP9.16□□□□□ -0.94
FOXN3-206ENST00000554005 SENP3-EIF4A1A0A087X0R7 540 aa9.15□□□□□ -0.94
FOXN3-206ENST00000554005 LCE2BO14633 110 aa9.15□□□□□ -0.94
FOXN3-206ENST00000554005 MSX1P28360 303 aa9.15□□□□□ -0.94
FOXN3-206ENST00000554005 MFAP1P55081 439 aaKnown RBP9.15□□□□□ -0.94
FOXN3-206ENST00000554005 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
FOXN3-206ENST00000554005 FAM26DQ5JW98 314 aa9.15□□□□□ -0.94
FOXN3-206ENST00000554005 RHPN1Q8TCX5 695 aa9.15□□□□□ -0.94
FOXN3-206ENST00000554005 FAM13AO94988 1023 aa9.14□□□□□ -0.95
FOXN3-206ENST00000554005 ARHGAP4P98171 946 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 304.1 ms