RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TEFQ10587 303 aa17.74■□□□□ 0.43
ACTN1-211ENST00000553882 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-211ENST00000553882 LMOD2Q6P5Q4 547 aa17.74■□□□□ 0.43
ACTN1-211ENST00000553882 PXDNLA1KZ92 1463 aa17.73■□□□□ 0.43
ACTN1-211ENST00000553882 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
ACTN1-211ENST00000553882 BTBD11A6QL63 1104 aa17.73■□□□□ 0.43
ACTN1-211ENST00000553882 RHPN1Q8TCX5 695 aa17.73■□□□□ 0.43
ACTN1-211ENST00000553882 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
ACTN1-211ENST00000553882 DNAAF4Q8WXU2 420 aa17.73■□□□□ 0.43
ACTN1-211ENST00000553882 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
ACTN1-211ENST00000553882 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
ACTN1-211ENST00000553882 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
ACTN1-211ENST00000553882 BEND3Q5T5X7 828 aa17.72■□□□□ 0.43
ACTN1-211ENST00000553882 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
ACTN1-211ENST00000553882 ESPNB1AK53 854 aa17.71■□□□□ 0.43
ACTN1-211ENST00000553882 CLCN1P35523 988 aa17.71■□□□□ 0.43
ACTN1-211ENST00000553882 POLA2Q14181 598 aa17.71■□□□□ 0.43
ACTN1-211ENST00000553882 PI4K2BQ8TCG2 481 aa17.7■□□□□ 0.42
ACTN1-211ENST00000553882 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
ACTN1-211ENST00000553882 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 ANAPC15P60006 121 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
ACTN1-211ENST00000553882 KIF1BPQ96EK5 621 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 NSFL1CQ9UNZ2 370 aaKnown RBP17.69■□□□□ 0.42
ACTN1-211ENST00000553882 NFAT5O94916 1531 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 RGPD2P0DJD1 1756 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 MCM2P49736 904 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 ORAI2Q96SN7 254 aa17.69■□□□□ 0.42
ACTN1-211ENST00000553882 PROSER3Q2NL68 480 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 ADCY9O60503 1353 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 AOX1Q06278 1338 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 KCNH5Q8NCM2 988 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
ACTN1-211ENST00000553882 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
ACTN1-211ENST00000553882 ZNF445P59923 1031 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 CUL4AQ13619 759 aa17.68■□□□□ 0.42
ACTN1-211ENST00000553882 PLEKHO1Q53GL0 409 aaPredicted RBP17.67■□□□□ 0.42
ACTN1-211ENST00000553882 C1orf141Q5JVX7 400 aa17.67■□□□□ 0.42
ACTN1-211ENST00000553882 CWC27Q6UX04 472 aaKnown RBP17.67■□□□□ 0.42
ACTN1-211ENST00000553882 ANP32BQ92688 251 aaKnown RBP17.67■□□□□ 0.42
ACTN1-211ENST00000553882 LARP6Q9BRS8 491 aaKnown RBP17.67■□□□□ 0.42
ACTN1-211ENST00000553882 GCP02774 474 aa17.67■□□□□ 0.42
ACTN1-211ENST00000553882 HOXB7P09629 217 aa17.67■□□□□ 0.42
ACTN1-211ENST00000553882 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
ACTN1-211ENST00000553882 MAP3K2Q9Y2U5 619 aa17.67■□□□□ 0.42
ACTN1-211ENST00000553882 PXDNQ92626 1479 aa17.66■□□□□ 0.42
ACTN1-211ENST00000553882 BRD1O95696 1058 aa17.66■□□□□ 0.42
ACTN1-211ENST00000553882 HSPA4P34932 840 aa17.66■□□□□ 0.42
ACTN1-211ENST00000553882 CWF19L2Q2TBE0 894 aaKnown RBP17.66■□□□□ 0.42
ACTN1-211ENST00000553882 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
ACTN1-211ENST00000553882 SPG7Q9UQ90 795 aa17.66■□□□□ 0.42
ACTN1-211ENST00000553882 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
ACTN1-211ENST00000553882 CCDC173Q0VFZ6 552 aa17.66■□□□□ 0.42
ACTN1-211ENST00000553882 RBSNQ9H1K0 784 aa17.66■□□□□ 0.42
ACTN1-211ENST00000553882 C9orf78Q9NZ63 289 aaPredicted RBP17.66■□□□□ 0.42
ACTN1-211ENST00000553882 PA2G4Q9UQ80 394 aaKnown RBP17.66■□□□□ 0.42
ACTN1-211ENST00000553882 MED1Q15648 1581 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-211ENST00000553882 SGSM2O43147 1006 aa17.65■□□□□ 0.42
ACTN1-211ENST00000553882 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
ACTN1-211ENST00000553882 CNTROBQ8N137 903 aa17.65■□□□□ 0.42
ACTN1-211ENST00000553882 DBF4Q9UBU7 674 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-211ENST00000553882 SYCE3A1L190 88 aa17.65■□□□□ 0.42
ACTN1-211ENST00000553882 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
ACTN1-211ENST00000553882 RAD50Q92878 1312 aa17.64■□□□□ 0.41
ACTN1-211ENST00000553882 RASEFQ8IZ41 740 aa17.64■□□□□ 0.41
ACTN1-211ENST00000553882 ANKRD24Q8TF21 1146 aa17.64■□□□□ 0.41
ACTN1-211ENST00000553882 INTS4Q96HW7 963 aaKnown RBP17.64■□□□□ 0.41
ACTN1-211ENST00000553882 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
ACTN1-211ENST00000553882 GIGYF1O75420 1035 aaPredicted RBP17.63■□□□□ 0.41
ACTN1-211ENST00000553882 AXIN2Q9Y2T1 843 aa17.63■□□□□ 0.41
ACTN1-211ENST00000553882 KDM3BQ7LBC6 1761 aa17.63■□□□□ 0.41
ACTN1-211ENST00000553882 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
ACTN1-211ENST00000553882 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
ACTN1-211ENST00000553882 SNX14Q9Y5W7 946 aa17.63■□□□□ 0.41
ACTN1-211ENST00000553882 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 DTNBO60941 627 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 CPA1P15085 419 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 KIAA1211Q6ZU35 1233 aa17.62■□□□□ 0.41
ACTN1-211ENST00000553882 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
ACTN1-211ENST00000553882 LSG1Q9H089 658 aaKnown RBP17.62■□□□□ 0.41
ACTN1-211ENST00000553882 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
ACTN1-211ENST00000553882 DIAPH3Q9NSV4 1193 aa17.6■□□□□ 0.41
ACTN1-211ENST00000553882 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
ACTN1-211ENST00000553882 KSR2Q6VAB6 950 aa17.6■□□□□ 0.41
ACTN1-211ENST00000553882 AK2P54819 239 aa17.59■□□□□ 0.41
ACTN1-211ENST00000553882 IL17RAQ96F46 866 aa17.59■□□□□ 0.41
ACTN1-211ENST00000553882 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
ACTN1-211ENST00000553882 RNF214Q8ND24 703 aa17.59■□□□□ 0.41
ACTN1-211ENST00000553882 LMO7Q8WWI1 1683 aa17.59■□□□□ 0.41
ACTN1-211ENST00000553882 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.59■□□□□ 0.41
ACTN1-211ENST00000553882 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.41
ACTN1-211ENST00000553882 SLC39A6Q13433 755 aa17.58■□□□□ 0.41
ACTN1-211ENST00000553882 MBD3O95983 291 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms