RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 RFC4P35249 363 aa12.2□□□□□ -0.46
CHD8-206ENST00000553870 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
CHD8-206ENST00000553870 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
CHD8-206ENST00000553870 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
CHD8-206ENST00000553870 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
CHD8-206ENST00000553870 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
CHD8-206ENST00000553870 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
CHD8-206ENST00000553870 PHF14O94880 888 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 POLD1P28340 1107 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 PTGER2P43116 358 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 GNAI1P63096 354 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 SGIP1Q9BQI5 828 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 USP16Q9Y5T5 823 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 LRP5O75197 1615 aa12.19□□□□□ -0.46
CHD8-206ENST00000553870 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
CHD8-206ENST00000553870 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
CHD8-206ENST00000553870 ZNF853P0CG23 659 aa12.18□□□□□ -0.46
CHD8-206ENST00000553870 IL6STP40189 918 aaPredicted RBP12.18□□□□□ -0.46
CHD8-206ENST00000553870 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
CHD8-206ENST00000553870 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
CHD8-206ENST00000553870 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
CHD8-206ENST00000553870 TJP1Q07157 1748 aa12.17□□□□□ -0.46
CHD8-206ENST00000553870 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
CHD8-206ENST00000553870 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
CHD8-206ENST00000553870 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
CHD8-206ENST00000553870 CHMP4AQ9BY43 222 aa12.17□□□□□ -0.46
CHD8-206ENST00000553870 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
CHD8-206ENST00000553870 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
CHD8-206ENST00000553870 IL16Q14005 1332 aa12.16□□□□□ -0.46
CHD8-206ENST00000553870 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
CHD8-206ENST00000553870 ZPR1O75312 459 aa12.16□□□□□ -0.46
CHD8-206ENST00000553870 A1BGP04217 495 aa12.16□□□□□ -0.46
CHD8-206ENST00000553870 CANXP27824 592 aaKnown RBP12.16□□□□□ -0.46
CHD8-206ENST00000553870 WDR63Q8IWG1 891 aa12.16□□□□□ -0.46
CHD8-206ENST00000553870 ARXQ96QS3 562 aa12.16□□□□□ -0.46
CHD8-206ENST00000553870 NARFQ9UHQ1 456 aa12.16□□□□□ -0.46
CHD8-206ENST00000553870 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
CHD8-206ENST00000553870 RGL2O15211 777 aa12.15□□□□□ -0.46
CHD8-206ENST00000553870 HOXB7P09629 217 aa12.15□□□□□ -0.46
CHD8-206ENST00000553870 LAS1LQ9Y4W2 734 aaKnown RBP12.15□□□□□ -0.46
CHD8-206ENST00000553870 TUBGCP6Q96RT7 1819 aa12.15□□□□□ -0.46
CHD8-206ENST00000553870 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
CHD8-206ENST00000553870 USP42Q9H9J4 1324 aaKnown RBP12.14□□□□□ -0.47
CHD8-206ENST00000553870 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
CHD8-206ENST00000553870 GYS1P13807 737 aa12.14□□□□□ -0.47
CHD8-206ENST00000553870 SMIM5Q71RC9 77 aa12.14□□□□□ -0.47
CHD8-206ENST00000553870 COL15A1P39059 1388 aa12.14□□□□□ -0.47
CHD8-206ENST00000553870 MIER1Q8N108 512 aa12.13□□□□□ -0.47
CHD8-206ENST00000553870 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
CHD8-206ENST00000553870 COL24A1Q17RW2 1714 aa12.13□□□□□ -0.47
CHD8-206ENST00000553870 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
CHD8-206ENST00000553870 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
CHD8-206ENST00000553870 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
CHD8-206ENST00000553870 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
CHD8-206ENST00000553870 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
CHD8-206ENST00000553870 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
CHD8-206ENST00000553870 TM4SF1P30408 202 aa12.11□□□□□ -0.47
CHD8-206ENST00000553870 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
CHD8-206ENST00000553870 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
CHD8-206ENST00000553870 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
CHD8-206ENST00000553870 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
CHD8-206ENST00000553870 MMP10P09238 476 aa12.1□□□□□ -0.47
CHD8-206ENST00000553870 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
CHD8-206ENST00000553870 FKBP8Q14318 412 aa12.1□□□□□ -0.47
CHD8-206ENST00000553870 DUSP27Q5VZP5 1158 aa12.1□□□□□ -0.47
CHD8-206ENST00000553870 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
CHD8-206ENST00000553870 TBC1D2BQ9UPU7 963 aa12.1□□□□□ -0.47
CHD8-206ENST00000553870 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
CHD8-206ENST00000553870 ERVV-1B6SEH8 477 aa12.09□□□□□ -0.47
CHD8-206ENST00000553870 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
CHD8-206ENST00000553870 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
CHD8-206ENST00000553870 BCL2L12Q9HB09 334 aa12.09□□□□□ -0.47
CHD8-206ENST00000553870 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHD8-206ENST00000553870 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
CHD8-206ENST00000553870 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
CHD8-206ENST00000553870 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
CHD8-206ENST00000553870 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
CHD8-206ENST00000553870 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
CHD8-206ENST00000553870 PDIA6Q15084 440 aa12.08□□□□□ -0.48
CHD8-206ENST00000553870 HDGFL1Q5TGJ6 251 aa12.08□□□□□ -0.48
CHD8-206ENST00000553870 DBF4Q9UBU7 674 aaPredicted RBP12.08□□□□□ -0.48
CHD8-206ENST00000553870 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
CHD8-206ENST00000553870 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
CHD8-206ENST00000553870 DCAF8L1A6NGE4 600 aa12.07□□□□□ -0.48
CHD8-206ENST00000553870 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
CHD8-206ENST00000553870 NFIXQ14938 502 aa12.07□□□□□ -0.48
CHD8-206ENST00000553870 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
CHD8-206ENST00000553870 POTEHQ6S545 545 aa12.07□□□□□ -0.48
CHD8-206ENST00000553870 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
CHD8-206ENST00000553870 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
CHD8-206ENST00000553870 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
CHD8-206ENST00000553870 C4AP0C0L4 1744 aa12.06□□□□□ -0.48
CHD8-206ENST00000553870 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
CHD8-206ENST00000553870 MYL6BP14649 208 aa12.06□□□□□ -0.48
CHD8-206ENST00000553870 TGFB2P61812 414 aa12.06□□□□□ -0.48
CHD8-206ENST00000553870 CCDC30Q5VVM6 783 aa12.06□□□□□ -0.48
CHD8-206ENST00000553870 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
CHD8-206ENST00000553870 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
CHD8-206ENST00000553870 SETDB2Q96T68 719 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms