RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 RFC4P35249 363 aa26.86■■□□□ 1.89
FOXA1-203ENST00000553751 TEX13AQ9BXU3 409 aaPredicted RBP26.86■■□□□ 1.89
FOXA1-203ENST00000553751 RRP7AQ9Y3A4 280 aaKnown RBP26.86■■□□□ 1.89
FOXA1-203ENST00000553751 STARD3NLO95772 234 aa26.85■■□□□ 1.89
FOXA1-203ENST00000553751 MIS18AQ9NYP9 233 aa26.85■■□□□ 1.89
FOXA1-203ENST00000553751 GYS1P13807 737 aa26.84■■□□□ 1.89
FOXA1-203ENST00000553751 USP42Q9H9J4 1324 aaKnown RBP26.84■■□□□ 1.89
FOXA1-203ENST00000553751 COL15A1P39059 1388 aa26.84■■□□□ 1.89
FOXA1-203ENST00000553751 LMOD3Q0VAK6 560 aa26.83■■□□□ 1.89
FOXA1-203ENST00000553751 KLHL34Q8N239 644 aa26.83■■□□□ 1.89
FOXA1-203ENST00000553751 PNISRQ8TF01 805 aaKnown RBP26.83■■□□□ 1.89
FOXA1-203ENST00000553751 SRP68Q9UHB9 627 aaKnown RBP26.82■■□□□ 1.88
FOXA1-203ENST00000553751 PRAMEF22A3QJZ6 481 aa26.81■■□□□ 1.88
FOXA1-203ENST00000553751 CANXP27824 592 aaKnown RBP26.81■■□□□ 1.88
FOXA1-203ENST00000553751 NLGN1Q8N2Q7 840 aa26.81■■□□□ 1.88
FOXA1-203ENST00000553751 MMP10P09238 476 aa26.8■■□□□ 1.88
FOXA1-203ENST00000553751 SNRPA1P09661 255 aaKnown RBP26.8■■□□□ 1.88
FOXA1-203ENST00000553751 NEUROD2Q15784 382 aa26.8■■□□□ 1.88
FOXA1-203ENST00000553751 TRIM35Q9UPQ4 493 aa26.79■■□□□ 1.88
FOXA1-203ENST00000553751 USP16Q9Y5T5 823 aa26.79■■□□□ 1.88
FOXA1-203ENST00000553751 LAMB4A4D0S4 1761 aa26.79■■□□□ 1.88
FOXA1-203ENST00000553751 EIF5P55010 431 aaKnown RBP26.78■■□□□ 1.88
FOXA1-203ENST00000553751 NLGN2Q8NFZ4 835 aa26.78■■□□□ 1.88
FOXA1-203ENST00000553751 A1BGP04217 495 aa26.76■■□□□ 1.87
FOXA1-203ENST00000553751 EIF4A1P60842 406 aaKnown RBP26.76■■□□□ 1.87
FOXA1-203ENST00000553751 FKBP8Q14318 412 aa26.76■■□□□ 1.87
FOXA1-203ENST00000553751 MRS2Q9HD23 443 aa26.76■■□□□ 1.87
FOXA1-203ENST00000553751 NARFQ9UHQ1 456 aa26.76■■□□□ 1.87
FOXA1-203ENST00000553751 ZPR1O75312 459 aa26.75■■□□□ 1.87
FOXA1-203ENST00000553751 IL6STP40189 918 aaPredicted RBP26.75■■□□□ 1.87
FOXA1-203ENST00000553751 USPL1Q5W0Q7 1092 aa26.75■■□□□ 1.87
FOXA1-203ENST00000553751 CD2APQ9Y5K6 639 aa26.75■■□□□ 1.87
FOXA1-203ENST00000553751 SCN7AQ01118 1682 aa26.74■■□□□ 1.87
FOXA1-203ENST00000553751 TSPYL4Q9UJ04 414 aa26.74■■□□□ 1.87
FOXA1-203ENST00000553751 APAF1O14727 1248 aa26.73■■□□□ 1.87
FOXA1-203ENST00000553751 BABAM1Q9NWV8 329 aa26.73■■□□□ 1.87
FOXA1-203ENST00000553751 A0A087WZG4 1122 aa26.72■■□□□ 1.87
FOXA1-203ENST00000553751 GIGYF1O75420 1035 aaPredicted RBP26.72■■□□□ 1.87
FOXA1-203ENST00000553751 BCL2L12Q9HB09 334 aa26.72■■□□□ 1.87
FOXA1-203ENST00000553751 KIF13BQ9NQT8 1826 aa26.72■■□□□ 1.87
FOXA1-203ENST00000553751 PIP4K2AP48426 406 aaPredicted RBP26.71■■□□□ 1.87
FOXA1-203ENST00000553751 ZNF330Q9Y3S2 320 aaPredicted RBP26.71■■□□□ 1.87
FOXA1-203ENST00000553751 C10orf71Q711Q0 1435 aa26.71■■□□□ 1.87
FOXA1-203ENST00000553751 DDR1Q08345 913 aa26.7■■□□□ 1.86
FOXA1-203ENST00000553751 DCAF8L1A6NGE4 600 aa26.69■■□□□ 1.86
FOXA1-203ENST00000553751 PARP3Q9Y6F1 533 aa26.69■■□□□ 1.86
FOXA1-203ENST00000553751 NBPF26B4DH59 902 aa26.68■■□□□ 1.86
FOXA1-203ENST00000553751 TM4SF1P30408 202 aa26.68■■□□□ 1.86
FOXA1-203ENST00000553751 NBPF10Q6P3W6 841 aaKnown RBP26.68■■□□□ 1.86
FOXA1-203ENST00000553751 NBPF15Q8N660 670 aa26.68■■□□□ 1.86
FOXA1-203ENST00000553751 BCORQ6W2J9 1755 aa26.68■■□□□ 1.86
FOXA1-203ENST00000553751 UTRNP46939 3433 aa26.68■■□□□ 1.86
FOXA1-203ENST00000553751 CHL1O00533 1208 aa26.67■■□□□ 1.86
FOXA1-203ENST00000553751 TBC1D2BQ9UPU7 963 aa26.67■■□□□ 1.86
FOXA1-203ENST00000553751 KIAA1551Q9HCM1 1747 aa26.67■■□□□ 1.86
FOXA1-203ENST00000553751 POLRMTO00411 1230 aaKnown RBP26.66■■□□□ 1.86
FOXA1-203ENST00000553751 NFIXQ14938 502 aa26.65■■□□□ 1.86
FOXA1-203ENST00000553751 GOLGB1Q14789 3259 aaKnown RBP26.64■■□□□ 1.86
FOXA1-203ENST00000553751 PXDNLA1KZ92 1463 aa26.64■■□□□ 1.86
FOXA1-203ENST00000553751 CAMTA2O94983 1202 aa26.64■■□□□ 1.86
FOXA1-203ENST00000553751 NPM2Q86SE8 214 aaKnown RBP26.64■■□□□ 1.86
FOXA1-203ENST00000553751 NRXN2Q9P2S2 1712 aa26.63■■□□□ 1.85
FOXA1-203ENST00000553751 DZIP3Q86Y13 1208 aaKnown RBP26.63■■□□□ 1.85
FOXA1-203ENST00000553751 LAS1LQ9Y4W2 734 aaKnown RBP26.63■■□□□ 1.85
FOXA1-203ENST00000553751 CFAP44Q96MT7 982 aa26.62■■□□□ 1.85
FOXA1-203ENST00000553751 AFDNP55196 1824 aaKnown RBP26.61■■□□□ 1.85
FOXA1-203ENST00000553751 GPR162Q16538 588 aa26.61■■□□□ 1.85
FOXA1-203ENST00000553751 ZNF853P0CG23 659 aa26.6■■□□□ 1.85
FOXA1-203ENST00000553751 YBX3P16989 372 aaKnown RBP eCLIP26.59■■□□□ 1.85
FOXA1-203ENST00000553751 KRT24Q2M2I5 525 aa26.59■■□□□ 1.85
FOXA1-203ENST00000553751 TBC1D9BQ66K14 1250 aa26.59■■□□□ 1.85
FOXA1-203ENST00000553751 PELP1Q8IZL8 1130 aaKnown RBP26.59■■□□□ 1.85
FOXA1-203ENST00000553751 ERBB4Q15303 1308 aa26.59■■□□□ 1.85
FOXA1-203ENST00000553751 N4BP2Q86UW6 1770 aaPredicted RBP26.58■■□□□ 1.85
FOXA1-203ENST00000553751 CALD1Q05682 793 aaKnown RBP26.58■■□□□ 1.85
FOXA1-203ENST00000553751 BICDL1Q6ZP65 573 aa26.58■■□□□ 1.85
FOXA1-203ENST00000553751 MBIPQ9NS73 344 aa26.58■■□□□ 1.85
FOXA1-203ENST00000553751 IFT57Q9NWB7 429 aa26.58■■□□□ 1.85
FOXA1-203ENST00000553751 SENP3-EIF4A1A0A087X0R7 540 aa26.57■■□□□ 1.84
FOXA1-203ENST00000553751 TGFB2P61812 414 aa26.57■■□□□ 1.84
FOXA1-203ENST00000553751 SERPINB2P05120 415 aa26.56■■□□□ 1.84
FOXA1-203ENST00000553751 CCDC27Q2M243 656 aa26.56■■□□□ 1.84
FOXA1-203ENST00000553751 EIF2S2P20042 333 aaKnown RBP26.55■■□□□ 1.84
FOXA1-203ENST00000553751 CARMIL3Q8ND23 1372 aa26.55■■□□□ 1.84
FOXA1-203ENST00000553751 RGL2O15211 777 aa26.54■■□□□ 1.84
FOXA1-203ENST00000553751 MYL6BP14649 208 aa26.54■■□□□ 1.84
FOXA1-203ENST00000553751 GNAI1P63096 354 aa26.54■■□□□ 1.84
FOXA1-203ENST00000553751 PDIA6Q15084 440 aa26.54■■□□□ 1.84
FOXA1-203ENST00000553751 CLEC4GQ6UXB4 293 aa26.54■■□□□ 1.84
FOXA1-203ENST00000553751 A0A0G2JLW4 131 aa26.53■■□□□ 1.84
FOXA1-203ENST00000553751 DPEP1P16444 411 aa26.53■■□□□ 1.84
FOXA1-203ENST00000553751 NCBP3Q53F19 620 aaKnown RBP26.53■■□□□ 1.84
FOXA1-203ENST00000553751 LRP10Q7Z4F1 713 aa26.53■■□□□ 1.84
FOXA1-203ENST00000553751 FAM9BQ8IZU0 186 aa26.53■■□□□ 1.84
FOXA1-203ENST00000553751 WWC3Q9ULE0 1092 aa26.53■■□□□ 1.84
FOXA1-203ENST00000553751 BRCA1P38398 1863 aaKnown RBP26.53■■□□□ 1.84
FOXA1-203ENST00000553751 WWC1Q8IX03 1113 aa26.52■■□□□ 1.84
FOXA1-203ENST00000553751 NGEFQ8N5V2 710 aa26.52■■□□□ 1.84
FOXA1-203ENST00000553751 ZNF652Q9Y2D9 606 aa26.52■■□□□ 1.84
FOXA1-203ENST00000553751 HOXB7P09629 217 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms