RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 WDR97A6NE52 1622 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 CCDC192P0DO97 292 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 CYP2C19P33261 490 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 PRPF4BQ13523 1007 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 FRMD4BQ9Y2L6 1034 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 IGHDP01880 384 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 ELF1P32519 619 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 WDR75Q8IWA0 830 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 TBC1D32Q96NH3 1257 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 DNAI2Q9GZS0 605 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 SMC3Q9UQE7 1217 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 GNPTABQ3T906 1256 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 CCDC70Q6NSX1 233 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 GIGYF2Q6Y7W6 1299 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 IQCA1Q86XH1 822 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 TEX11Q8IYF3 940 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 ANKRD24Q8TF21 1146 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 HSPA4P34932 840 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 TMC6Q7Z403 805 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 PACS2Q86VP3 889 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 CCDC65Q8IXS2 484 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 KINO60870 393 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 SH3BGRP55822 239 aaPredicted RBP10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 WHAMMP3Q1A5X7 153 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 FBXW10Q5XX13 1052 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 EFCAB13Q8IY85 973 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 ST5P78524 1137 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 GIMAP6Q6P9H5 292 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 ITFG2Q969R8 447 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 ERO1AQ96HE7 468 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 PYCARDQ9ULZ3 195 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 ACTN2P35609 894 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 PSMC4P43686 418 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 FBXO18Q8NFZ0 1043 aa10.43□□□□□ -0.74
GTF2A1-203ENST00000553612 RWDD2BP57060 319 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 ROCK1Q13464 1354 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 CGNL1Q0VF96 1302 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 MXRA7P84157 204 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 TRIM68Q6AZZ1 485 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 FBXO38Q6PIJ6 1188 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 CLASRPQ8N2M8 674 aaKnown RBP10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 FAM114A2Q9NRY5 505 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 ADAMTS8Q9UP79 889 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 CEP112Q8N8E3 955 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 CHAMP1Q96JM3 812 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 EIF5P55010 431 aaKnown RBP10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 DDX12PQ92771 950 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 CDKL5O76039 1030 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 POLE2P56282 527 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 PPP1R12CQ9BZL4 782 aa10.42□□□□□ -0.74
GTF2A1-203ENST00000553612 PDCD2Q16342 344 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 LUZP1Q86V48 1076 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 TRIM42Q8IWZ5 723 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 MORC2Q9Y6X9 1032 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 PPP1R12BO60237 982 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 ZEB2O60315 1214 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 OATP04181 439 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 KIF5BP33176 963 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 SAFB2Q14151 953 aaKnown RBP eCLIP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 MAP9Q49MG5 647 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 JMYQ8N9B5 988 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 TAOK3Q9H2K8 898 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 LMNB1P20700 586 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 PDE1CQ14123 709 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 TADA2BQ86TJ2 420 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 POTEDQ86YR6 584 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 CTDP1Q9Y5B0 961 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 PHLDB1Q86UU1 1377 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 CNTLNQ9NXG0 1405 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 CEP57L1Q8IYX8 460 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 TNMDQ9H2S6 317 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.745e-7■■■■■ 108.4
GTF2A1-203ENST00000553612 RIPOR2Q9Y4F9 1068 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 ACBD5Q5T8D3 534 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 OLFML1Q6UWY5 402 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
GTF2A1-203ENST00000553612 SYCP3Q8IZU3 236 aa10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 BICD1Q96G01 975 aa10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 IQCGQ9H095 443 aaKnown RBP10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 RSF1Q96T23 1441 aaPredicted RBP10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 SPAG9O60271 1321 aaKnown RBP10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 SNUPNO95149 360 aaKnown RBP10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 GOLGA6L9A6NEM1 432 aa10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 CCT5P48643 541 aa10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 LAMB3Q13751 1172 aa10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 BAIAP2L1Q9UHR4 511 aa10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 CFAP45Q9UL16 551 aa10.4□□□□□ -0.74
GTF2A1-203ENST00000553612 CCDC160A6NGH7 325 aa10.4□□□□□ -0.75
GTF2A1-203ENST00000553612 KMT5BQ4FZB7 885 aa10.4□□□□□ -0.75
GTF2A1-203ENST00000553612 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.75
GTF2A1-203ENST00000553612 CCDC121Q6ZUS5 278 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms