RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
ACTN1-208ENST00000553370 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
ACTN1-208ENST00000553370 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
ACTN1-208ENST00000553370 A0A0G2JLW4 131 aa13.42□□□□□ -0.26
ACTN1-208ENST00000553370 RPS6KA4O75676 772 aa13.42□□□□□ -0.26
ACTN1-208ENST00000553370 FCHSD2O94868 740 aa13.42□□□□□ -0.26
ACTN1-208ENST00000553370 CRKLP46109 303 aaKnown RBP13.42□□□□□ -0.26
ACTN1-208ENST00000553370 TGFB2P61812 414 aa13.42□□□□□ -0.26
ACTN1-208ENST00000553370 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-208ENST00000553370 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
ACTN1-208ENST00000553370 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
ACTN1-208ENST00000553370 ZPR1O75312 459 aa13.41□□□□□ -0.26
ACTN1-208ENST00000553370 GYS1P13807 737 aa13.41□□□□□ -0.26
ACTN1-208ENST00000553370 SLC4A9Q96Q91 983 aa13.41□□□□□ -0.26
ACTN1-208ENST00000553370 HMOX1P09601 288 aa13.4□□□□□ -0.26
ACTN1-208ENST00000553370 AKAP4Q5JQC9 854 aa13.4□□□□□ -0.26
ACTN1-208ENST00000553370 PAXIP1Q6ZW49 1069 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-208ENST00000553370 SBF1O95248 1867 aa13.4□□□□□ -0.26
ACTN1-208ENST00000553370 DPEP1P16444 411 aa13.39□□□□□ -0.27
ACTN1-208ENST00000553370 IL13P35225 146 aa13.39□□□□□ -0.27
ACTN1-208ENST00000553370 CC2D1BQ5T0F9 858 aaKnown RBP13.39□□□□□ -0.27
ACTN1-208ENST00000553370 SRP68Q9UHB9 627 aaKnown RBP13.39□□□□□ -0.27
ACTN1-208ENST00000553370 UBR2Q8IWV8 1755 aa13.39□□□□□ -0.27
ACTN1-208ENST00000553370 CACNA1SQ13698 1873 aa13.39□□□□□ -0.27
ACTN1-208ENST00000553370 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
ACTN1-208ENST00000553370 SLC52A2Q9HAB3 445 aa13.38□□□□□ -0.27
ACTN1-208ENST00000553370 USP42Q9H9J4 1324 aaKnown RBP13.38□□□□□ -0.27
ACTN1-208ENST00000553370 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
ACTN1-208ENST00000553370 MRC1P22897 1456 aa13.37□□□□□ -0.27
ACTN1-208ENST00000553370 RGL2O15211 777 aa13.37□□□□□ -0.27
ACTN1-208ENST00000553370 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
ACTN1-208ENST00000553370 HSPA6P17066 643 aa13.37□□□□□ -0.27
ACTN1-208ENST00000553370 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-208ENST00000553370 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
ACTN1-208ENST00000553370 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
ACTN1-208ENST00000553370 PIM2Q9P1W9 311 aa13.37□□□□□ -0.27
ACTN1-208ENST00000553370 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
ACTN1-208ENST00000553370 DALRD3Q5D0E6 543 aaKnown RBP13.36□□□□□ -0.27
ACTN1-208ENST00000553370 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
ACTN1-208ENST00000553370 TNRC6CQ9HCJ0 1690 aaKnown RBP13.36□□□□□ -0.27
ACTN1-208ENST00000553370 COL15A1P39059 1388 aa13.35□□□□□ -0.27
ACTN1-208ENST00000553370 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
ACTN1-208ENST00000553370 RNMTO43148 476 aaKnown RBP13.35□□□□□ -0.27
ACTN1-208ENST00000553370 SLC39A6Q13433 755 aa13.35□□□□□ -0.27
ACTN1-208ENST00000553370 SIPA1L3O60292 1781 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-208ENST00000553370 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
ACTN1-208ENST00000553370 USPL1Q5W0Q7 1092 aa13.34□□□□□ -0.27
ACTN1-208ENST00000553370 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
ACTN1-208ENST00000553370 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
ACTN1-208ENST00000553370 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-208ENST00000553370 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
ACTN1-208ENST00000553370 NPHP1O15259 732 aa13.33□□□□□ -0.28
ACTN1-208ENST00000553370 DDR1Q08345 913 aa13.33□□□□□ -0.28
ACTN1-208ENST00000553370 TEFQ10587 303 aa13.33□□□□□ -0.28
ACTN1-208ENST00000553370 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
ACTN1-208ENST00000553370 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
ACTN1-208ENST00000553370 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-208ENST00000553370 WDR90Q96KV7 1748 aa13.33□□□□□ -0.28
ACTN1-208ENST00000553370 SCN7AQ01118 1682 aa13.32□□□□□ -0.28
ACTN1-208ENST00000553370 CANXP27824 592 aaKnown RBP13.32□□□□□ -0.28
ACTN1-208ENST00000553370 CHRNA5P30532 468 aa13.32□□□□□ -0.28
ACTN1-208ENST00000553370 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
ACTN1-208ENST00000553370 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
ACTN1-208ENST00000553370 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-208ENST00000553370 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
ACTN1-208ENST00000553370 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
ACTN1-208ENST00000553370 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
ACTN1-208ENST00000553370 KIF3CO14782 793 aa13.31□□□□□ -0.28
ACTN1-208ENST00000553370 STARD3NLO95772 234 aa13.31□□□□□ -0.28
ACTN1-208ENST00000553370 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
ACTN1-208ENST00000553370 CFAP53Q96M91 514 aa13.31□□□□□ -0.28
ACTN1-208ENST00000553370 TOMM70O94826 608 aa13.3□□□□□ -0.28
ACTN1-208ENST00000553370 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-208ENST00000553370 APLP1P51693 650 aa13.3□□□□□ -0.28
ACTN1-208ENST00000553370 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
ACTN1-208ENST00000553370 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
ACTN1-208ENST00000553370 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
ACTN1-208ENST00000553370 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-208ENST00000553370 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
ACTN1-208ENST00000553370 DICER1Q9UPY3 1922 aaKnown RBP13.3□□□□□ -0.28
ACTN1-208ENST00000553370 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
ACTN1-208ENST00000553370 A0A087WZG4 1122 aa13.29□□□□□ -0.28
ACTN1-208ENST00000553370 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
ACTN1-208ENST00000553370 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
ACTN1-208ENST00000553370 BCORQ6W2J9 1755 aa13.28□□□□□ -0.28
ACTN1-208ENST00000553370 NFIXQ14938 502 aa13.28□□□□□ -0.28
ACTN1-208ENST00000553370 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
ACTN1-208ENST00000553370 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-208ENST00000553370 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.28
ACTN1-208ENST00000553370 SERPINB2P05120 415 aa13.27□□□□□ -0.29
ACTN1-208ENST00000553370 KCNA3P22001 575 aa13.27□□□□□ -0.29
ACTN1-208ENST00000553370 C2CD5Q86YS7 1000 aa13.27□□□□□ -0.29
ACTN1-208ENST00000553370 H0YIN7 160 aa13.26□□□□□ -0.29
ACTN1-208ENST00000553370 TM4SF1P30408 202 aa13.26□□□□□ -0.29
ACTN1-208ENST00000553370 RASSF7Q02833 373 aa13.26□□□□□ -0.29
ACTN1-208ENST00000553370 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
ACTN1-208ENST00000553370 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-208ENST00000553370 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
ACTN1-208ENST00000553370 NPC1L1Q9UHC9 1359 aa13.25□□□□□ -0.29
ACTN1-208ENST00000553370 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms