RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
LETMD1-234ENST00000552645 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-234ENST00000552645 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
LETMD1-234ENST00000552645 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
LETMD1-234ENST00000552645 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
LETMD1-234ENST00000552645 AMIGO3Q86WK7 504 aa12.91□□□□□ -0.34
LETMD1-234ENST00000552645 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
LETMD1-234ENST00000552645 CCDC87Q9NVE4 849 aa12.91□□□□□ -0.34
LETMD1-234ENST00000552645 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
LETMD1-234ENST00000552645 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
LETMD1-234ENST00000552645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
LETMD1-234ENST00000552645 CHL1O00533 1208 aa12.9□□□□□ -0.34
LETMD1-234ENST00000552645 ZBTB7AO95365 584 aa12.9□□□□□ -0.34
LETMD1-234ENST00000552645 GNAI1P63096 354 aa12.9□□□□□ -0.34
LETMD1-234ENST00000552645 TEX13AQ9BXU3 409 aaPredicted RBP12.9□□□□□ -0.34
LETMD1-234ENST00000552645 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
LETMD1-234ENST00000552645 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
LETMD1-234ENST00000552645 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
LETMD1-234ENST00000552645 CASZ1Q86V15 1759 aa12.9□□□□□ -0.35
LETMD1-234ENST00000552645 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
LETMD1-234ENST00000552645 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
LETMD1-234ENST00000552645 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
LETMD1-234ENST00000552645 INTS5Q6P9B9 1019 aaKnown RBP12.89□□□□□ -0.35
LETMD1-234ENST00000552645 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
LETMD1-234ENST00000552645 TSR2Q969E8 191 aaKnown RBP12.89□□□□□ -0.35
LETMD1-234ENST00000552645 ARXQ96QS3 562 aa12.89□□□□□ -0.35
LETMD1-234ENST00000552645 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
LETMD1-234ENST00000552645 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
LETMD1-234ENST00000552645 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-234ENST00000552645 A1BGP04217 495 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-234ENST00000552645 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-234ENST00000552645 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 EIF2S2P20042 333 aaKnown RBP12.88□□□□□ -0.35
LETMD1-234ENST00000552645 SSFA2P28290 1259 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
LETMD1-234ENST00000552645 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
LETMD1-234ENST00000552645 C4AP0C0L4 1744 aa12.87□□□□□ -0.35
LETMD1-234ENST00000552645 ZNF853P0CG23 659 aa12.87□□□□□ -0.35
LETMD1-234ENST00000552645 RFC4P35249 363 aa12.87□□□□□ -0.35
LETMD1-234ENST00000552645 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
LETMD1-234ENST00000552645 WDR63Q8IWG1 891 aa12.87□□□□□ -0.35
LETMD1-234ENST00000552645 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
LETMD1-234ENST00000552645 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
LETMD1-234ENST00000552645 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
LETMD1-234ENST00000552645 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
LETMD1-234ENST00000552645 IL16Q14005 1332 aa12.85□□□□□ -0.35
LETMD1-234ENST00000552645 COL15A1P39059 1388 aa12.85□□□□□ -0.35
LETMD1-234ENST00000552645 MYL6BP14649 208 aa12.84□□□□□ -0.35
LETMD1-234ENST00000552645 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
LETMD1-234ENST00000552645 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
LETMD1-234ENST00000552645 ZPR1O75312 459 aa12.84□□□□□ -0.35
LETMD1-234ENST00000552645 ADRA2BP18089 450 aa12.84□□□□□ -0.35
LETMD1-234ENST00000552645 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
LETMD1-234ENST00000552645 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
LETMD1-234ENST00000552645 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
LETMD1-234ENST00000552645 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
LETMD1-234ENST00000552645 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
LETMD1-234ENST00000552645 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
LETMD1-234ENST00000552645 SLC16A10Q8TF71 515 aa12.83□□□□□ -0.36
LETMD1-234ENST00000552645 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
LETMD1-234ENST00000552645 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
LETMD1-234ENST00000552645 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
LETMD1-234ENST00000552645 ANXA1P04083 346 aa12.82□□□□□ -0.36
LETMD1-234ENST00000552645 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
LETMD1-234ENST00000552645 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
LETMD1-234ENST00000552645 NBPF10Q6P3W6 841 aaKnown RBP12.82□□□□□ -0.36
LETMD1-234ENST00000552645 NBPF15Q8N660 670 aa12.82□□□□□ -0.36
LETMD1-234ENST00000552645 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
LETMD1-234ENST00000552645 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
LETMD1-234ENST00000552645 A0A087WZG4 1122 aa12.81□□□□□ -0.36
LETMD1-234ENST00000552645 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
LETMD1-234ENST00000552645 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
LETMD1-234ENST00000552645 POLD1P28340 1107 aa12.8□□□□□ -0.36
LETMD1-234ENST00000552645 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
LETMD1-234ENST00000552645 TWISTNBQ3B726 338 aaPredicted RBP12.8□□□□□ -0.36
LETMD1-234ENST00000552645 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
LETMD1-234ENST00000552645 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
LETMD1-234ENST00000552645 USP42Q9H9J4 1324 aaKnown RBP12.8□□□□□ -0.36
LETMD1-234ENST00000552645 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
LETMD1-234ENST00000552645 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
LETMD1-234ENST00000552645 GYS1P13807 737 aa12.8□□□□□ -0.36
LETMD1-234ENST00000552645 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
LETMD1-234ENST00000552645 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
LETMD1-234ENST00000552645 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
LETMD1-234ENST00000552645 E9PSI1 815 aa12.79□□□□□ -0.36
LETMD1-234ENST00000552645 HOXB7P09629 217 aa12.79□□□□□ -0.36
LETMD1-234ENST00000552645 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
LETMD1-234ENST00000552645 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
LETMD1-234ENST00000552645 LRP5O75197 1615 aa12.79□□□□□ -0.36
LETMD1-234ENST00000552645 PTGER2P43116 358 aa12.78□□□□□ -0.36
LETMD1-234ENST00000552645 BICDL1Q6ZP65 573 aa12.78□□□□□ -0.36
LETMD1-234ENST00000552645 NLGN1Q8N2Q7 840 aa12.78□□□□□ -0.36
LETMD1-234ENST00000552645 SCN7AQ01118 1682 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms