RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 DPEP1P16444 411 aa30.88■■■□□ 2.53
TROAP-216ENST00000551567 ZNF790Q6PG37 636 aa30.88■■■□□ 2.53
TROAP-216ENST00000551567 ZNF496Q96IT1 587 aaPredicted RBP30.88■■■□□ 2.53
TROAP-216ENST00000551567 BCS1LQ9Y276 419 aa30.88■■■□□ 2.53
TROAP-216ENST00000551567 CEMIPQ8WUJ3 1361 aa30.88■■■□□ 2.53
TROAP-216ENST00000551567 GIGYF1O75420 1035 aaPredicted RBP30.87■■■□□ 2.53
TROAP-216ENST00000551567 CANXP27824 592 aaKnown RBP30.86■■■□□ 2.53
TROAP-216ENST00000551567 ADCY9O60503 1353 aa30.86■■■□□ 2.53
TROAP-216ENST00000551567 HEG1Q9ULI3 1381 aa30.86■■■□□ 2.53
TROAP-216ENST00000551567 AFDNP55196 1824 aaKnown RBP30.85■■■□□ 2.53
TROAP-216ENST00000551567 C1QTNF8P60827 252 aa30.85■■■□□ 2.53
TROAP-216ENST00000551567 POLRMTO00411 1230 aaKnown RBP30.84■■■□□ 2.53
TROAP-216ENST00000551567 STARD3NLO95772 234 aa30.84■■■□□ 2.53
TROAP-216ENST00000551567 NARFQ9UHQ1 456 aa30.84■■■□□ 2.53
TROAP-216ENST00000551567 TM4SF1P30408 202 aa30.83■■■□□ 2.53
TROAP-216ENST00000551567 FCHSD2O94868 740 aa30.82■■■□□ 2.52
TROAP-216ENST00000551567 ARFGEF1Q9Y6D6 1849 aa30.82■■■□□ 2.52
TROAP-216ENST00000551567 BTBD11A6QL63 1104 aa30.8■■■□□ 2.52
TROAP-216ENST00000551567 ZNF526Q8TF50 670 aaPredicted RBP30.8■■■□□ 2.52
TROAP-216ENST00000551567 FMNL2Q96PY5 1086 aa30.8■■■□□ 2.52
TROAP-216ENST00000551567 NRXN2Q9P2S2 1712 aa30.79■■■□□ 2.52
TROAP-216ENST00000551567 SCN7AQ01118 1682 aa30.79■■■□□ 2.52
TROAP-216ENST00000551567 KCNQ3O43525 872 aa30.79■■■□□ 2.52
TROAP-216ENST00000551567 KCNA3P22001 575 aa30.79■■■□□ 2.52
TROAP-216ENST00000551567 NFIXQ14938 502 aa30.79■■■□□ 2.52
TROAP-216ENST00000551567 MCM10Q7L590 875 aa30.79■■■□□ 2.52
TROAP-216ENST00000551567 BCL2L12Q9HB09 334 aa30.79■■■□□ 2.52
TROAP-216ENST00000551567 RTF1Q92541 710 aaKnown RBP30.78■■■□□ 2.52
TROAP-216ENST00000551567 TEX13AQ9BXU3 409 aaPredicted RBP30.78■■■□□ 2.52
TROAP-216ENST00000551567 ZNF330Q9Y3S2 320 aaPredicted RBP30.78■■■□□ 2.52
TROAP-216ENST00000551567 EIF5P55010 431 aaKnown RBP30.77■■■□□ 2.52
TROAP-216ENST00000551567 GPBP1L1Q9HC44 474 aaPredicted RBP30.77■■■□□ 2.52
TROAP-216ENST00000551567 CHRNA5P30532 468 aa30.76■■■□□ 2.51
TROAP-216ENST00000551567 DLG5Q8TDM6 1919 aa30.76■■■□□ 2.51
TROAP-216ENST00000551567 DCTN1Q14203 1278 aa30.75■■■□□ 2.51
TROAP-216ENST00000551567 ARHGAP27Q6ZUM4 889 aa30.75■■■□□ 2.51
TROAP-216ENST00000551567 PIM2Q9P1W9 311 aa30.75■■■□□ 2.51
TROAP-216ENST00000551567 SENP3-EIF4A1A0A087X0R7 540 aa30.74■■■□□ 2.51
TROAP-216ENST00000551567 A0A087WZG4 1122 aa30.73■■■□□ 2.51
TROAP-216ENST00000551567 A1BGP04217 495 aa30.72■■■□□ 2.51
TROAP-216ENST00000551567 BICDL1Q6ZP65 573 aa30.72■■■□□ 2.51
TROAP-216ENST00000551567 SERPINB2P05120 415 aa30.71■■■□□ 2.51
TROAP-216ENST00000551567 DALRD3Q5D0E6 543 aaKnown RBP30.71■■■□□ 2.51
TROAP-216ENST00000551567 DLEC1Q9Y238 1755 aa30.71■■■□□ 2.51
TROAP-216ENST00000551567 IL6STP40189 918 aaPredicted RBP30.7■■■□□ 2.51
TROAP-216ENST00000551567 TBC1D2BQ9UPU7 963 aa30.7■■■□□ 2.51
TROAP-216ENST00000551567 BCORQ6W2J9 1755 aa30.69■■■□□ 2.5
TROAP-216ENST00000551567 PRAMEF22A3QJZ6 481 aa30.68■■■□□ 2.5
TROAP-216ENST00000551567 HTATSF1O43719 755 aaKnown RBP30.68■■■□□ 2.5
TROAP-216ENST00000551567 CARMIL3Q8ND23 1372 aa30.67■■■□□ 2.5
TROAP-216ENST00000551567 NEFMP07197 916 aa30.67■■■□□ 2.5
TROAP-216ENST00000551567 USP16Q9Y5T5 823 aa30.67■■■□□ 2.5
TROAP-216ENST00000551567 PIP4K2AP48426 406 aaPredicted RBP30.66■■■□□ 2.5
TROAP-216ENST00000551567 TBC1D9BQ66K14 1250 aa30.66■■■□□ 2.5
TROAP-216ENST00000551567 NPM2Q86SE8 214 aaKnown RBP30.66■■■□□ 2.5
TROAP-216ENST00000551567 ANKRD31Q8N7Z5 1873 aa30.65■■■□□ 2.5
TROAP-216ENST00000551567 SNRPA1P09661 255 aaKnown RBP30.63■■■□□ 2.49
TROAP-216ENST00000551567 LAMB4A4D0S4 1761 aa30.63■■■□□ 2.49
TROAP-216ENST00000551567 KDM3BQ7LBC6 1761 aa30.63■■■□□ 2.49
TROAP-216ENST00000551567 PLEKHF1Q96S99 279 aa30.62■■■□□ 2.49
TROAP-216ENST00000551567 CAMTA2O94983 1202 aa30.61■■■□□ 2.49
TROAP-216ENST00000551567 TAF7Q15545 349 aaPredicted RBP30.61■■■□□ 2.49
TROAP-216ENST00000551567 MIS18AQ9NYP9 233 aa30.61■■■□□ 2.49
TROAP-216ENST00000551567 C9orf131Q5VYM1 1079 aa30.6■■■□□ 2.49
TROAP-216ENST00000551567 DZIP3Q86Y13 1208 aaKnown RBP30.6■■■□□ 2.49
TROAP-216ENST00000551567 C2CD5Q86YS7 1000 aa30.6■■■□□ 2.49
TROAP-216ENST00000551567 SBF1O95248 1867 aa30.59■■■□□ 2.49
TROAP-216ENST00000551567 COL11A2P13942 1736 aaPredicted RBP30.59■■■□□ 2.49
TROAP-216ENST00000551567 MAPK8IP3Q9UPT6 1336 aa30.58■■■□□ 2.49
TROAP-216ENST00000551567 DDX10Q13206 875 aaKnown RBP30.58■■■□□ 2.49
TROAP-216ENST00000551567 NFE2L2Q16236 605 aa30.58■■■□□ 2.49
TROAP-216ENST00000551567 CCDC24Q8N4L8 307 aa30.58■■■□□ 2.49
TROAP-216ENST00000551567 RALBP1Q15311 655 aa30.57■■■□□ 2.48
TROAP-216ENST00000551567 H0YIN7 160 aa30.56■■■□□ 2.48
TROAP-216ENST00000551567 PRR5LQ6MZQ0 368 aa30.56■■■□□ 2.48
TROAP-216ENST00000551567 THUMPD2Q9BTF0 503 aaKnown RBP30.56■■■□□ 2.48
TROAP-216ENST00000551567 KIF3CO14782 793 aa30.55■■■□□ 2.48
TROAP-216ENST00000551567 SETDB2Q96T68 719 aa30.55■■■□□ 2.48
TROAP-216ENST00000551567 RNF181Q9P0P0 153 aa30.55■■■□□ 2.48
TROAP-216ENST00000551567 TTLL6Q8N841 843 aa30.54■■■□□ 2.48
TROAP-216ENST00000551567 PNNQ9H307 717 aaKnown RBP30.54■■■□□ 2.48
TROAP-216ENST00000551567 NBPF26B4DH59 902 aa30.53■■■□□ 2.48
TROAP-216ENST00000551567 NPHP1O15259 732 aa30.53■■■□□ 2.48
TROAP-216ENST00000551567 NBPF10Q6P3W6 841 aaKnown RBP30.53■■■□□ 2.48
TROAP-216ENST00000551567 NBPF15Q8N660 670 aa30.53■■■□□ 2.48
TROAP-216ENST00000551567 RASSF7Q02833 373 aa30.52■■■□□ 2.48
TROAP-216ENST00000551567 CNBD1Q8NA66 436 aa30.52■■■□□ 2.48
TROAP-216ENST00000551567 BRIP1Q9BX63 1249 aa30.52■■■□□ 2.48
TROAP-216ENST00000551567 CACNA1SQ13698 1873 aa30.52■■■□□ 2.48
TROAP-216ENST00000551567 PNISRQ8TF01 805 aaKnown RBP30.51■■■□□ 2.47
TROAP-216ENST00000551567 PDE6BP35913 854 aa30.5■■■□□ 2.47
TROAP-216ENST00000551567 NMRK2Q9NPI5 230 aa30.5■■■□□ 2.47
TROAP-216ENST00000551567 CEP350Q5VT06 3117 aa30.5■■■□□ 2.47
TROAP-216ENST00000551567 CCDC88AQ3V6T2 1871 aa30.49■■■□□ 2.47
TROAP-216ENST00000551567 ZNF622Q969S3 477 aaKnown RBP eCLIP30.49■■■□□ 2.47
TROAP-216ENST00000551567 ZNF652Q9Y2D9 606 aa30.48■■■□□ 2.47
TROAP-216ENST00000551567 MYBBP1AQ9BQG0 1328 aaKnown RBP30.47■■■□□ 2.47
TROAP-216ENST00000551567 ST5P78524 1137 aa30.47■■■□□ 2.47
TROAP-216ENST00000551567 CLEC4GQ6UXB4 293 aa30.47■■■□□ 2.47
TROAP-216ENST00000551567 TIAM2Q8IVF5 1701 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms