RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 SRP68Q9UHB9 627 aaKnown RBP32.38■■■□□ 2.77
PXN-217ENST00000550795 BTBD11A6QL63 1104 aa32.36■■■□□ 2.77
PXN-217ENST00000550795 USP42Q9H9J4 1324 aaKnown RBP32.35■■■□□ 2.77
PXN-217ENST00000550795 ZBTB1Q9Y2K1 713 aa32.35■■■□□ 2.77
PXN-217ENST00000550795 ATP10DQ9P241 1426 aa32.34■■■□□ 2.77
PXN-217ENST00000550795 SOS1Q07889 1333 aaPredicted RBP32.34■■■□□ 2.77
PXN-217ENST00000550795 MYBBP1AQ9BQG0 1328 aaKnown RBP32.34■■■□□ 2.77
PXN-217ENST00000550795 HEG1Q9ULI3 1381 aa32.33■■■□□ 2.77
PXN-217ENST00000550795 AFDNP55196 1824 aaKnown RBP32.33■■■□□ 2.77
PXN-217ENST00000550795 HTATSF1O43719 755 aaKnown RBP32.33■■■□□ 2.77
PXN-217ENST00000550795 DLG5Q8TDM6 1919 aa32.33■■■□□ 2.77
PXN-217ENST00000550795 ARFGEF1Q9Y6D6 1849 aa32.33■■■□□ 2.77
PXN-217ENST00000550795 NEFMP07197 916 aa32.32■■■□□ 2.76
PXN-217ENST00000550795 FKBP8Q14318 412 aa32.31■■■□□ 2.76
PXN-217ENST00000550795 FMNL2Q96PY5 1086 aa32.31■■■□□ 2.76
PXN-217ENST00000550795 CANXP27824 592 aaKnown RBP32.3■■■□□ 2.76
PXN-217ENST00000550795 NRXN2Q9P2S2 1712 aa32.3■■■□□ 2.76
PXN-217ENST00000550795 STARD3NLO95772 234 aa32.29■■■□□ 2.76
PXN-217ENST00000550795 C1QTNF8P60827 252 aa32.28■■■□□ 2.76
PXN-217ENST00000550795 DDR1Q08345 913 aa32.28■■■□□ 2.76
PXN-217ENST00000550795 NFE2L2Q16236 605 aa32.28■■■□□ 2.76
PXN-217ENST00000550795 COL15A1P39059 1388 aa32.27■■■□□ 2.76
PXN-217ENST00000550795 USPL1Q5W0Q7 1092 aa32.26■■■□□ 2.75
PXN-217ENST00000550795 TEX13AQ9BXU3 409 aaPredicted RBP32.26■■■□□ 2.75
PXN-217ENST00000550795 PNNQ9H307 717 aaKnown RBP32.26■■■□□ 2.75
PXN-217ENST00000550795 SCN7AQ01118 1682 aa32.26■■■□□ 2.75
PXN-217ENST00000550795 ZPR1O75312 459 aa32.25■■■□□ 2.75
PXN-217ENST00000550795 PRKRIP1Q9H875 184 aaPredicted RBP32.25■■■□□ 2.75
PXN-217ENST00000550795 MIS18AQ9NYP9 233 aa32.25■■■□□ 2.75
PXN-217ENST00000550795 PARP3Q9Y6F1 533 aa32.25■■■□□ 2.75
PXN-217ENST00000550795 MAPK8IP3Q9UPT6 1336 aa32.25■■■□□ 2.75
PXN-217ENST00000550795 TGFB2P61812 414 aa32.24■■■□□ 2.75
PXN-217ENST00000550795 TAF7Q15545 349 aaPredicted RBP32.24■■■□□ 2.75
PXN-217ENST00000550795 NARFQ9UHQ1 456 aa32.24■■■□□ 2.75
PXN-217ENST00000550795 DLEC1Q9Y238 1755 aa32.23■■■□□ 2.75
PXN-217ENST00000550795 A0A0G2JLW4 131 aa32.23■■■□□ 2.75
PXN-217ENST00000550795 PRAMEF22A3QJZ6 481 aa32.23■■■□□ 2.75
PXN-217ENST00000550795 GIGYF1O75420 1035 aaPredicted RBP32.23■■■□□ 2.75
PXN-217ENST00000550795 THUMPD2Q9BTF0 503 aaKnown RBP32.23■■■□□ 2.75
PXN-217ENST00000550795 A1BGP04217 495 aa32.22■■■□□ 2.75
PXN-217ENST00000550795 EIF5P55010 431 aaKnown RBP32.22■■■□□ 2.75
PXN-217ENST00000550795 USP16Q9Y5T5 823 aa32.22■■■□□ 2.75
PXN-217ENST00000550795 DPEP1P16444 411 aa32.21■■■□□ 2.75
PXN-217ENST00000550795 TM4SF1P30408 202 aa32.2■■■□□ 2.75
PXN-217ENST00000550795 BCL2L12Q9HB09 334 aa32.2■■■□□ 2.75
PXN-217ENST00000550795 POLRMTO00411 1230 aaKnown RBP32.19■■■□□ 2.74
PXN-217ENST00000550795 KCNA3P22001 575 aa32.19■■■□□ 2.74
PXN-217ENST00000550795 ZNF330Q9Y3S2 320 aaPredicted RBP32.18■■■□□ 2.74
PXN-217ENST00000550795 BCORQ6W2J9 1755 aa32.17■■■□□ 2.74
PXN-217ENST00000550795 SNRPA1P09661 255 aaKnown RBP32.16■■■□□ 2.74
PXN-217ENST00000550795 CCDC146Q8IYE0 955 aa32.16■■■□□ 2.74
PXN-217ENST00000550795 BCS1LQ9Y276 419 aa32.16■■■□□ 2.74
PXN-217ENST00000550795 IL6STP40189 918 aaPredicted RBP32.15■■■□□ 2.74
PXN-217ENST00000550795 PIP4K2AP48426 406 aaPredicted RBP32.15■■■□□ 2.74
PXN-217ENST00000550795 RIPK4P57078 832 aa32.15■■■□□ 2.74
PXN-217ENST00000550795 NFIXQ14938 502 aa32.15■■■□□ 2.74
PXN-217ENST00000550795 ANKRD31Q8N7Z5 1873 aa32.14■■■□□ 2.74
PXN-217ENST00000550795 TBC1D2BQ9UPU7 963 aa32.14■■■□□ 2.74
PXN-217ENST00000550795 A0A087WZG4 1122 aa32.13■■■□□ 2.73
PXN-217ENST00000550795 TMPOP42166 694 aaKnown RBP32.13■■■□□ 2.73
PXN-217ENST00000550795 SENP3-EIF4A1A0A087X0R7 540 aa32.12■■■□□ 2.73
PXN-217ENST00000550795 WDR43Q15061 677 aaKnown RBP eCLIP32.12■■■□□ 2.73
PXN-217ENST00000550795 ADAMTS8Q9UP79 889 aa32.12■■■□□ 2.73
PXN-217ENST00000550795 RRP7AQ9Y3A4 280 aaKnown RBP32.12■■■□□ 2.73
PXN-217ENST00000550795 KDM3BQ7LBC6 1761 aa32.12■■■□□ 2.73
PXN-217ENST00000550795 PNISRQ8TF01 805 aaKnown RBP32.11■■■□□ 2.73
PXN-217ENST00000550795 SBF1O95248 1867 aa32.11■■■□□ 2.73
PXN-217ENST00000550795 ZNF526Q8TF50 670 aaPredicted RBP32.1■■■□□ 2.73
PXN-217ENST00000550795 COL11A2P13942 1736 aaPredicted RBP32.09■■■□□ 2.73
PXN-217ENST00000550795 CARMIL3Q8ND23 1372 aa32.08■■■□□ 2.73
PXN-217ENST00000550795 ZNF316A6NFI3 1004 aaPredicted RBP32.08■■■□□ 2.73
PXN-217ENST00000550795 CHRNA5P30532 468 aa32.08■■■□□ 2.73
PXN-217ENST00000550795 BICDL1Q6ZP65 573 aa32.08■■■□□ 2.73
PXN-217ENST00000550795 GPBP1L1Q9HC44 474 aaPredicted RBP32.08■■■□□ 2.73
PXN-217ENST00000550795 EIF4A1P60842 406 aaKnown RBP32.07■■■□□ 2.72
PXN-217ENST00000550795 NEUROD2Q15784 382 aa32.07■■■□□ 2.72
PXN-217ENST00000550795 RUNDC1Q96C34 613 aa32.07■■■□□ 2.72
PXN-217ENST00000550795 NBPF26B4DH59 902 aa32.06■■■□□ 2.72
PXN-217ENST00000550795 TBC1D9BQ66K14 1250 aa32.06■■■□□ 2.72
PXN-217ENST00000550795 NBPF10Q6P3W6 841 aaKnown RBP32.06■■■□□ 2.72
PXN-217ENST00000550795 NBPF15Q8N660 670 aa32.06■■■□□ 2.72
PXN-217ENST00000550795 LAMB4A4D0S4 1761 aa32.06■■■□□ 2.72
PXN-217ENST00000550795 SERPINB2P05120 415 aa32.05■■■□□ 2.72
PXN-217ENST00000550795 NPM2Q86SE8 214 aaKnown RBP32.05■■■□□ 2.72
PXN-217ENST00000550795 CAMTA2O94983 1202 aa32.04■■■□□ 2.72
PXN-217ENST00000550795 DZIP3Q86Y13 1208 aaKnown RBP32.04■■■□□ 2.72
PXN-217ENST00000550795 PIM2Q9P1W9 311 aa32.03■■■□□ 2.72
PXN-217ENST00000550795 ARHGAP27Q6ZUM4 889 aa32.02■■■□□ 2.72
PXN-217ENST00000550795 LMOD3Q0VAK6 560 aa32.01■■■□□ 2.71
PXN-217ENST00000550795 TSPYL4Q9UJ04 414 aa32.01■■■□□ 2.71
PXN-217ENST00000550795 TRIM35Q9UPQ4 493 aa32■■■□□ 2.71
PXN-217ENST00000550795 KIF3CO14782 793 aa31.99■■■□□ 2.71
PXN-217ENST00000550795 CCDC184Q52MB2 194 aa31.99■■■□□ 2.71
PXN-217ENST00000550795 CEP350Q5VT06 3117 aa31.98■■■□□ 2.71
PXN-217ENST00000550795 DALRD3Q5D0E6 543 aaKnown RBP31.98■■■□□ 2.71
PXN-217ENST00000550795 CACNA1SQ13698 1873 aa31.97■■■□□ 2.71
PXN-217ENST00000550795 CCDC88AQ3V6T2 1871 aa31.96■■■□□ 2.71
PXN-217ENST00000550795 TIAM2Q8IVF5 1701 aa31.95■■■□□ 2.7
PXN-217ENST00000550795 CCDC24Q8N4L8 307 aa31.94■■■□□ 2.7
PXN-217ENST00000550795 SETDB2Q96T68 719 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms