RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
LETMD1-226ENST00000550755 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
LETMD1-226ENST00000550755 ZNF232Q9UNY5 417 aa10.49□□□□□ -0.73
LETMD1-226ENST00000550755 DKK1O94907 266 aa10.48□□□□□ -0.73
LETMD1-226ENST00000550755 FOXK2Q01167 660 aa10.48□□□□□ -0.73
LETMD1-226ENST00000550755 EFHC2Q5JST6 749 aa10.48□□□□□ -0.73
LETMD1-226ENST00000550755 CUEDC1Q9NWM3 386 aaPredicted RBP10.48□□□□□ -0.73
LETMD1-226ENST00000550755 USP3Q9Y6I4 520 aa10.48□□□□□ -0.73
LETMD1-226ENST00000550755 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.47□□□□□ -0.73
LETMD1-226ENST00000550755 WIPF1O43516 503 aa10.47□□□□□ -0.73
LETMD1-226ENST00000550755 TEAD4Q15561 434 aa10.47□□□□□ -0.73
LETMD1-226ENST00000550755 DBN1Q16643 649 aa10.47□□□□□ -0.73
LETMD1-226ENST00000550755 TBCELQ5QJ74 424 aa10.47□□□□□ -0.73
LETMD1-226ENST00000550755 PBXIP1Q96AQ6 731 aa10.47□□□□□ -0.73
LETMD1-226ENST00000550755 ZNF837Q96EG3 531 aaPredicted RBP10.47□□□□□ -0.73
LETMD1-226ENST00000550755 TRERF1Q96PN7 1200 aa10.47□□□□□ -0.73
LETMD1-226ENST00000550755 TSPAN10Q9H1Z9 355 aaPredicted RBP10.47□□□□□ -0.73
LETMD1-226ENST00000550755 SERTM1A2A2V5 107 aa10.46□□□□□ -0.73
LETMD1-226ENST00000550755 PSMA6P60900 246 aaKnown RBP10.46□□□□□ -0.73
LETMD1-226ENST00000550755 LBRQ14739 615 aaKnown RBP10.46□□□□□ -0.73
LETMD1-226ENST00000550755 ARSJQ5FYB0 599 aaPredicted RBP10.46□□□□□ -0.73
LETMD1-226ENST00000550755 LCE2CQ5TA81 110 aa10.46□□□□□ -0.73
LETMD1-226ENST00000550755 L3MBTL2Q969R5 705 aa10.46□□□□□ -0.73
LETMD1-226ENST00000550755 RUBCNLQ9H714 662 aa10.46□□□□□ -0.73
LETMD1-226ENST00000550755 NOVA2Q9UNW9 492 aaKnown RBP10.46□□□□□ -0.73
LETMD1-226ENST00000550755 PARP3Q9Y6F1 533 aa10.46□□□□□ -0.73
LETMD1-226ENST00000550755 PPP1R12BO60237 982 aaPredicted RBP10.45□□□□□ -0.74
LETMD1-226ENST00000550755 NOS2P35228 1153 aa10.45□□□□□ -0.74
LETMD1-226ENST00000550755 GPR161Q8N6U8 529 aaKnown RBP10.45□□□□□ -0.74
LETMD1-226ENST00000550755 ZDHHC3Q9NYG2 299 aa10.45□□□□□ -0.74
LETMD1-226ENST00000550755 TIMELESSQ9UNS1 1208 aa10.45□□□□□ -0.74
LETMD1-226ENST00000550755 INSM1Q01101 510 aaPredicted RBP10.44□□□□□ -0.74
LETMD1-226ENST00000550755 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
LETMD1-226ENST00000550755 ZNF295-AS1Q8N0V1 137 aa10.44□□□□□ -0.74
LETMD1-226ENST00000550755 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
LETMD1-226ENST00000550755 GTPBP3Q969Y2 492 aaKnown RBP10.44□□□□□ -0.74
LETMD1-226ENST00000550755 COL25A1Q9BXS0 654 aaPredicted RBP10.44□□□□□ -0.74
LETMD1-226ENST00000550755 ATAD2Q6PL18 1390 aa10.43□□□□□ -0.74
LETMD1-226ENST00000550755 SCG3Q8WXD2 468 aaKnown RBP10.43□□□□□ -0.74
LETMD1-226ENST00000550755 ARXQ96QS3 562 aa10.43□□□□□ -0.74
LETMD1-226ENST00000550755 CRISPLD1Q9H336 500 aa10.43□□□□□ -0.74
LETMD1-226ENST00000550755 GJA3Q9Y6H8 435 aa10.43□□□□□ -0.74
LETMD1-226ENST00000550755 ATG7O95352 703 aa10.42□□□□□ -0.74
LETMD1-226ENST00000550755 ELOAQ14241 798 aaKnown RBP10.42□□□□□ -0.74
LETMD1-226ENST00000550755 ZDHHC1Q8WTX9 485 aa10.42□□□□□ -0.74
LETMD1-226ENST00000550755 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
LETMD1-226ENST00000550755 C1orf115Q9H7X2 142 aa10.42□□□□□ -0.74
LETMD1-226ENST00000550755 PHF24Q9UPV7 400 aa10.42□□□□□ -0.74
LETMD1-226ENST00000550755 SUPT5HO00267 1087 aaKnown RBP10.41□□□□□ -0.74
LETMD1-226ENST00000550755 ATP4AP20648 1035 aa10.41□□□□□ -0.74
LETMD1-226ENST00000550755 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
LETMD1-226ENST00000550755 FIGNL1Q6PIW4 674 aa10.41□□□□□ -0.74
LETMD1-226ENST00000550755 CNTNAP3BQ96NU0 1288 aa10.41□□□□□ -0.74
LETMD1-226ENST00000550755 CNTNAP3Q9BZ76 1288 aa10.41□□□□□ -0.74
LETMD1-226ENST00000550755 NEUROD4Q9HD90 331 aa10.41□□□□□ -0.74
LETMD1-226ENST00000550755 GPR25O00155 361 aa10.4□□□□□ -0.74
LETMD1-226ENST00000550755 NLRP8Q86W28 1048 aa10.4□□□□□ -0.74
LETMD1-226ENST00000550755 A0A1W2PNR3 127 aa10.39□□□□□ -0.75
LETMD1-226ENST00000550755 EML1O00423 815 aa10.39□□□□□ -0.75
LETMD1-226ENST00000550755 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
LETMD1-226ENST00000550755 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
LETMD1-226ENST00000550755 LGR5O75473 907 aa10.38□□□□□ -0.75
LETMD1-226ENST00000550755 PPP1R15AO75807 674 aaPredicted RBP10.38□□□□□ -0.75
LETMD1-226ENST00000550755 IGFBP4P22692 258 aa10.38□□□□□ -0.75
LETMD1-226ENST00000550755 TXLNAP40222 546 aa10.38□□□□□ -0.75
LETMD1-226ENST00000550755 HIRAP54198 1017 aaPredicted RBP10.38□□□□□ -0.75
LETMD1-226ENST00000550755 SWI5Q1ZZU3 235 aa10.38□□□□□ -0.75
LETMD1-226ENST00000550755 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
LETMD1-226ENST00000550755 HCN4Q9Y3Q4 1203 aa10.38□□□□□ -0.75
LETMD1-226ENST00000550755 GPC6Q9Y625 555 aaPredicted RBP10.38□□□□□ -0.75
LETMD1-226ENST00000550755 C21orf2O43822 256 aa10.37□□□□□ -0.75
LETMD1-226ENST00000550755 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
LETMD1-226ENST00000550755 RHPN1Q8TCX5 695 aa10.37□□□□□ -0.75
LETMD1-226ENST00000550755 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
LETMD1-226ENST00000550755 ZIC5Q96T25 663 aa10.37□□□□□ -0.75
LETMD1-226ENST00000550755 CFHR5Q9BXR6 569 aa10.37□□□□□ -0.75
LETMD1-226ENST00000550755 RNFT1Q5M7Z0 435 aa10.36□□□□□ -0.75
LETMD1-226ENST00000550755 SH3PXD2AQ5TCZ1 1133 aa10.36□□□□□ -0.75
LETMD1-226ENST00000550755 C2orf49Q9BVC5 232 aaPredicted RBP10.36□□□□□ -0.75
LETMD1-226ENST00000550755 PHACTR1Q9C0D0 580 aa10.36□□□□□ -0.75
LETMD1-226ENST00000550755 MBIPQ9NS73 344 aa10.36□□□□□ -0.75
LETMD1-226ENST00000550755 ZMIZ1Q9ULJ6 1067 aa10.36□□□□□ -0.75
LETMD1-226ENST00000550755 MX2P20592 715 aa10.35□□□□□ -0.75
LETMD1-226ENST00000550755 STK32AQ8WU08 396 aa10.35□□□□□ -0.75
LETMD1-226ENST00000550755 ZCCHC2Q9C0B9 1178 aaKnown RBP10.35□□□□□ -0.75
LETMD1-226ENST00000550755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.35□□□□□ -0.75
LETMD1-226ENST00000550755 ATXN7L1Q9ULK2 861 aaPredicted RBP10.35□□□□□ -0.75
LETMD1-226ENST00000550755 PCDHGC4Q9Y5F7 938 aa10.35□□□□□ -0.75
LETMD1-226ENST00000550755 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
LETMD1-226ENST00000550755 THBS1P07996 1170 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 WEE1P30291 646 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 KRT76Q01546 638 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 GAS6Q14393 721 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 ALDH16A1Q8IZ83 802 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 ZSCAN1Q8NBB4 408 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 NGLY1Q96IV0 654 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 ARID3AQ99856 593 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 ANKIB1Q9P2G1 1089 aa10.34□□□□□ -0.75
LETMD1-226ENST00000550755 FOXO3O43524 673 aa10.33□□□□□ -0.76
LETMD1-226ENST00000550755 SRSF11Q05519 484 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms