RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 SSH3Q8TE77 659 aa11.19□□□□□ -0.62
UBE2N-205ENST00000550657 CYP2E1P05181 493 aaPredicted RBP11.19□□□□□ -0.62
UBE2N-205ENST00000550657 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
UBE2N-205ENST00000550657 C9orf78Q9NZ63 289 aaPredicted RBP11.19□□□□□ -0.62
UBE2N-205ENST00000550657 ANKARQ7Z5J8 1434 aa11.19□□□□□ -0.62
UBE2N-205ENST00000550657 PLEKHO1Q53GL0 409 aaPredicted RBP11.18□□□□□ -0.62
UBE2N-205ENST00000550657 BEND3Q5T5X7 828 aa11.18□□□□□ -0.62
UBE2N-205ENST00000550657 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
UBE2N-205ENST00000550657 PA2G4Q9UQ80 394 aaKnown RBP11.18□□□□□ -0.62
UBE2N-205ENST00000550657 GCP02774 474 aa11.18□□□□□ -0.62
UBE2N-205ENST00000550657 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
UBE2N-205ENST00000550657 ZSCAN23Q3MJ62 389 aa11.18□□□□□ -0.62
UBE2N-205ENST00000550657 SPG7Q9UQ90 795 aa11.18□□□□□ -0.62
UBE2N-205ENST00000550657 MAP3K2Q9Y2U5 619 aa11.18□□□□□ -0.62
UBE2N-205ENST00000550657 ANP32BQ92688 251 aaKnown RBP11.17□□□□□ -0.62
UBE2N-205ENST00000550657 STAP2Q9UGK3 403 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 XRN1Q8IZH2 1706 aaKnown RBP11.17□□□□□ -0.62
UBE2N-205ENST00000550657 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
UBE2N-205ENST00000550657 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 KCNH5Q8NCM2 988 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 GPT2Q8TD30 523 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 ANKRD24Q8TF21 1146 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 KIF1BPQ96EK5 621 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 GDPD2Q9HCC8 539 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
UBE2N-205ENST00000550657 NSFL1CQ9UNZ2 370 aaKnown RBP11.17□□□□□ -0.62
UBE2N-205ENST00000550657 NWD1Q149M9 1564 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 CLEC17AQ6ZS10 378 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 DDX54Q8TDD1 881 aaKnown RBP11.17□□□□□ -0.62
UBE2N-205ENST00000550657 BABAM1Q9NWV8 329 aa11.17□□□□□ -0.62
UBE2N-205ENST00000550657 ESPNB1AK53 854 aa11.16□□□□□ -0.62
UBE2N-205ENST00000550657 RAB11FIP3O75154 756 aa11.16□□□□□ -0.62
UBE2N-205ENST00000550657 CPA1P15085 419 aa11.16□□□□□ -0.62
UBE2N-205ENST00000550657 RNMTO43148 476 aaKnown RBP11.16□□□□□ -0.62
UBE2N-205ENST00000550657 PI4K2BQ8TCG2 481 aa11.16□□□□□ -0.62
UBE2N-205ENST00000550657 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
UBE2N-205ENST00000550657 FMN2Q9NZ56 1722 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 SLC39A6Q13433 755 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 POLA2Q14181 598 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 KIAA1211Q6ZU35 1233 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 CNTROBQ8N137 903 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 AXIN2Q9Y2T1 843 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 CEMIPQ8WUJ3 1361 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 SYCE3A1L190 88 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.62
UBE2N-205ENST00000550657 SIL1Q9H173 461 aa11.15□□□□□ -0.62
UBE2N-205ENST00000550657 DBF4Q9UBU7 674 aaPredicted RBP11.15□□□□□ -0.62
UBE2N-205ENST00000550657 SETD1BQ9UPS6 1966 aaKnown RBP11.15□□□□□ -0.63
UBE2N-205ENST00000550657 MYL6BP14649 208 aa11.14□□□□□ -0.63
UBE2N-205ENST00000550657 MCM2P49736 904 aa11.14□□□□□ -0.63
UBE2N-205ENST00000550657 PIP4K2AP48426 406 aaPredicted RBP11.14□□□□□ -0.63
UBE2N-205ENST00000550657 CLASRPQ8N2M8 674 aaKnown RBP11.14□□□□□ -0.63
UBE2N-205ENST00000550657 RNF214Q8ND24 703 aa11.14□□□□□ -0.63
UBE2N-205ENST00000550657 RBSNQ9H1K0 784 aa11.14□□□□□ -0.63
UBE2N-205ENST00000550657 DIAPH3Q9NSV4 1193 aa11.14□□□□□ -0.63
UBE2N-205ENST00000550657 ADCY9O60503 1353 aa11.14□□□□□ -0.63
UBE2N-205ENST00000550657 IFIT2P09913 472 aaKnown RBP11.14□□□□□ -0.63
UBE2N-205ENST00000550657 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
UBE2N-205ENST00000550657 DDX17Q92841 729 aaKnown RBP11.14□□□□□ -0.63
UBE2N-205ENST00000550657 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
UBE2N-205ENST00000550657 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
UBE2N-205ENST00000550657 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 SGSM2O43147 1006 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 HSPA4P34932 840 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 CLCN1P35523 988 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 ANAPC15P60006 121 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 AMOTQ4VCS5 1084 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 AACSQ86V21 672 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 ARHGEF25Q86VW2 580 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 NLRP2Q9NX02 1062 aa11.13□□□□□ -0.63
UBE2N-205ENST00000550657 KLHDC4Q8TBB5 520 aa11.12□□□□□ -0.63
UBE2N-205ENST00000550657 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
UBE2N-205ENST00000550657 SNX14Q9Y5W7 946 aa11.12□□□□□ -0.63
UBE2N-205ENST00000550657 BRD1O95696 1058 aa11.12□□□□□ -0.63
UBE2N-205ENST00000550657 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
UBE2N-205ENST00000550657 KRT28Q7Z3Y7 464 aa11.12□□□□□ -0.63
UBE2N-205ENST00000550657 CASTP20810 708 aaKnown RBP11.11□□□□□ -0.63
UBE2N-205ENST00000550657 CCDC173Q0VFZ6 552 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 CUL4AQ13619 759 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 KSR2Q6VAB6 950 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 RIC3Q7Z5B4 369 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 PXDNQ92626 1479 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 HOXB7P09629 217 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 KCNJ4P48050 445 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 AK2P54819 239 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 ZNF445P59923 1031 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 PRPF40BQ6NWY9 871 aaKnown RBP11.11□□□□□ -0.63
UBE2N-205ENST00000550657 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
UBE2N-205ENST00000550657 SUCLG2Q96I99 432 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
UBE2N-205ENST00000550657 AOX1Q06278 1338 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 GLRX3O76003 335 aaKnown RBP11.11□□□□□ -0.63
UBE2N-205ENST00000550657 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 PTH1RQ03431 593 aa11.11□□□□□ -0.63
UBE2N-205ENST00000550657 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
UBE2N-205ENST00000550657 RAD50Q92878 1312 aa11.1□□□□□ -0.63
UBE2N-205ENST00000550657 GADD45BO75293 160 aaPredicted RBP11.1□□□□□ -0.63
UBE2N-205ENST00000550657 BICC1Q9H694 974 aaKnown RBP11.1□□□□□ -0.63
UBE2N-205ENST00000550657 ECHDC1Q9NTX5 307 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms