RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 FANCIQ9NVI1 1328 aa16.84■□□□□ 0.29
TROAP-212ENST00000550346 CACNA1FO60840 1977 aa16.83■□□□□ 0.28
TROAP-212ENST00000550346 HOXB7P09629 217 aa16.83■□□□□ 0.28
TROAP-212ENST00000550346 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
TROAP-212ENST00000550346 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.28
TROAP-212ENST00000550346 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
TROAP-212ENST00000550346 ARXQ96QS3 562 aa16.83■□□□□ 0.28
TROAP-212ENST00000550346 KCPQ6ZWJ8 1503 aa16.82■□□□□ 0.28
TROAP-212ENST00000550346 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
TROAP-212ENST00000550346 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
TROAP-212ENST00000550346 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
TROAP-212ENST00000550346 R3HDM1Q15032 1099 aaKnown RBP16.82■□□□□ 0.28
TROAP-212ENST00000550346 ZNF831Q5JPB2 1677 aa16.81■□□□□ 0.28
TROAP-212ENST00000550346 A0A087WZG4 1122 aa16.81■□□□□ 0.28
TROAP-212ENST00000550346 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
TROAP-212ENST00000550346 A1BGP04217 495 aa16.81■□□□□ 0.28
TROAP-212ENST00000550346 EXOSC9Q06265 439 aaKnown RBP16.81■□□□□ 0.28
TROAP-212ENST00000550346 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
TROAP-212ENST00000550346 C8orf58Q8NAV2 365 aa16.81■□□□□ 0.28
TROAP-212ENST00000550346 ZNF330Q9Y3S2 320 aaPredicted RBP16.81■□□□□ 0.28
TROAP-212ENST00000550346 PHF14O94880 888 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 RFC4P35249 363 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 ZNF827Q17R98 1081 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 KRT24Q2M2I5 525 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
TROAP-212ENST00000550346 HDGFL1Q5TGJ6 251 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 CCDC30Q5VVM6 783 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 TAF1LQ8IZX4 1826 aa16.8■□□□□ 0.28
TROAP-212ENST00000550346 C5P01031 1676 aa16.79■□□□□ 0.28
TROAP-212ENST00000550346 RREB1Q92766 1687 aa16.79■□□□□ 0.28
TROAP-212ENST00000550346 ADRA2BP18089 450 aa16.79■□□□□ 0.28
TROAP-212ENST00000550346 SSFA2P28290 1259 aa16.79■□□□□ 0.28
TROAP-212ENST00000550346 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
TROAP-212ENST00000550346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.78■□□□□ 0.28
TROAP-212ENST00000550346 PSDA5PKW4 1024 aaPredicted RBP16.78■□□□□ 0.28
TROAP-212ENST00000550346 ZPR1O75312 459 aa16.78■□□□□ 0.28
TROAP-212ENST00000550346 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
TROAP-212ENST00000550346 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
TROAP-212ENST00000550346 ERBB4Q15303 1308 aa16.77■□□□□ 0.28
TROAP-212ENST00000550346 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
TROAP-212ENST00000550346 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
TROAP-212ENST00000550346 MYL6BP14649 208 aa16.77■□□□□ 0.28
TROAP-212ENST00000550346 TSPYL6Q8N831 410 aa16.77■□□□□ 0.28
TROAP-212ENST00000550346 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.28
TROAP-212ENST00000550346 ZBTB1Q9Y2K1 713 aa16.77■□□□□ 0.28
TROAP-212ENST00000550346 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
TROAP-212ENST00000550346 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
TROAP-212ENST00000550346 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
TROAP-212ENST00000550346 VAMP4O75379 141 aa16.75■□□□□ 0.27
TROAP-212ENST00000550346 EIF5P55010 431 aaKnown RBP16.75■□□□□ 0.27
TROAP-212ENST00000550346 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
TROAP-212ENST00000550346 SLC16A10Q8TF71 515 aa16.75■□□□□ 0.27
TROAP-212ENST00000550346 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
TROAP-212ENST00000550346 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
TROAP-212ENST00000550346 TJP1Q07157 1748 aa16.74■□□□□ 0.27
TROAP-212ENST00000550346 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
TROAP-212ENST00000550346 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
TROAP-212ENST00000550346 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
TROAP-212ENST00000550346 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
TROAP-212ENST00000550346 MYH14Q7Z406 1995 aaKnown RBP16.74■□□□□ 0.27
TROAP-212ENST00000550346 CT47B1P0C2W7 299 aaPredicted RBP16.73■□□□□ 0.27
TROAP-212ENST00000550346 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
TROAP-212ENST00000550346 SMIM5Q71RC9 77 aa16.73■□□□□ 0.27
TROAP-212ENST00000550346 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
TROAP-212ENST00000550346 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
TROAP-212ENST00000550346 TBC1D2BQ9UPU7 963 aa16.73■□□□□ 0.27
TROAP-212ENST00000550346 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
TROAP-212ENST00000550346 PNPLA7Q6ZV29 1317 aa16.72■□□□□ 0.27
TROAP-212ENST00000550346 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
TROAP-212ENST00000550346 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
TROAP-212ENST00000550346 DZIP3Q86Y13 1208 aaKnown RBP16.72■□□□□ 0.27
TROAP-212ENST00000550346 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
TROAP-212ENST00000550346 NARFQ9UHQ1 456 aa16.72■□□□□ 0.27
TROAP-212ENST00000550346 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
TROAP-212ENST00000550346 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.27
TROAP-212ENST00000550346 COL15A1P39059 1388 aa16.7■□□□□ 0.26
TROAP-212ENST00000550346 ANXA1P04083 346 aa16.7■□□□□ 0.26
TROAP-212ENST00000550346 PDIA6Q15084 440 aa16.7■□□□□ 0.26
TROAP-212ENST00000550346 COPS6Q7L5N1 327 aa16.7■□□□□ 0.26
TROAP-212ENST00000550346 ZNF652Q9Y2D9 606 aa16.7■□□□□ 0.26
TROAP-212ENST00000550346 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
TROAP-212ENST00000550346 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
TROAP-212ENST00000550346 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
TROAP-212ENST00000550346 RCAN3Q9UKA8 241 aa16.69■□□□□ 0.26
TROAP-212ENST00000550346 UBR3Q6ZT12 1888 aa16.69■□□□□ 0.26
TROAP-212ENST00000550346 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
TROAP-212ENST00000550346 POLD1P28340 1107 aa16.68■□□□□ 0.26
TROAP-212ENST00000550346 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
TROAP-212ENST00000550346 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
TROAP-212ENST00000550346 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
TROAP-212ENST00000550346 SPON1Q9HCB6 807 aa16.68■□□□□ 0.26
TROAP-212ENST00000550346 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
TROAP-212ENST00000550346 ERVV-1B6SEH8 477 aa16.67■□□□□ 0.26
TROAP-212ENST00000550346 RARSP54136 660 aaKnown RBP16.67■□□□□ 0.26
TROAP-212ENST00000550346 ALDH1L2Q3SY69 923 aa16.67■□□□□ 0.26
TROAP-212ENST00000550346 CLEC4GQ6UXB4 293 aa16.67■□□□□ 0.26
TROAP-212ENST00000550346 ANKRD13DQ6ZTN6 518 aa16.67■□□□□ 0.26
TROAP-212ENST00000550346 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
TROAP-212ENST00000550346 SRP68Q9UHB9 627 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms