RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 DIAPH1O60610 1272 aaKnown RBP20.89■□□□□ 0.93
RAB5C-205ENST00000550013 ZBTB1Q9Y2K1 713 aa20.89■□□□□ 0.93
RAB5C-205ENST00000550013 UBR2Q8IWV8 1755 aa20.89■□□□□ 0.93
RAB5C-205ENST00000550013 SBF1O95248 1867 aa20.88■□□□□ 0.93
RAB5C-205ENST00000550013 COL15A1P39059 1388 aa20.88■□□□□ 0.93
RAB5C-205ENST00000550013 TOMM70O94826 608 aa20.88■□□□□ 0.93
RAB5C-205ENST00000550013 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
RAB5C-205ENST00000550013 NFIXQ14938 502 aa20.87■□□□□ 0.93
RAB5C-205ENST00000550013 NARFQ9UHQ1 456 aa20.87■□□□□ 0.93
RAB5C-205ENST00000550013 NRXN2Q9P2S2 1712 aa20.87■□□□□ 0.93
RAB5C-205ENST00000550013 RNF181Q9P0P0 153 aa20.86■□□□□ 0.93
RAB5C-205ENST00000550013 COL3A1P02461 1466 aaPredicted RBP20.86■□□□□ 0.93
RAB5C-205ENST00000550013 CNGB1Q14028 1251 aaPredicted RBP20.85■□□□□ 0.93
RAB5C-205ENST00000550013 BCL2L12Q9HB09 334 aa20.85■□□□□ 0.93
RAB5C-205ENST00000550013 APLP1P51693 650 aa20.84■□□□□ 0.93
RAB5C-205ENST00000550013 DLEC1Q9Y238 1755 aa20.84■□□□□ 0.93
RAB5C-205ENST00000550013 CANXP27824 592 aaKnown RBP20.83■□□□□ 0.93
RAB5C-205ENST00000550013 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
RAB5C-205ENST00000550013 SIPA1L3O60292 1781 aaPredicted RBP20.82■□□□□ 0.92
RAB5C-205ENST00000550013 U2SURPO15042 1029 aaKnown RBP20.81■□□□□ 0.92
RAB5C-205ENST00000550013 SERPINB2P05120 415 aa20.81■□□□□ 0.92
RAB5C-205ENST00000550013 RASSF7Q02833 373 aa20.81■□□□□ 0.92
RAB5C-205ENST00000550013 RBM46Q8TBY0 533 aaKnown RBP20.81■□□□□ 0.92
RAB5C-205ENST00000550013 TTC5Q8N0Z6 440 aa20.8■□□□□ 0.92
RAB5C-205ENST00000550013 WDR90Q96KV7 1748 aa20.8■□□□□ 0.92
RAB5C-205ENST00000550013 CARMIL3Q8ND23 1372 aa20.8■□□□□ 0.92
RAB5C-205ENST00000550013 TNRC6CQ9HCJ0 1690 aaKnown RBP20.8■□□□□ 0.92
RAB5C-205ENST00000550013 KDM2BQ8NHM5 1336 aa20.79■□□□□ 0.92
RAB5C-205ENST00000550013 EIF5P55010 431 aaKnown RBP20.79■□□□□ 0.92
RAB5C-205ENST00000550013 BICDL1Q6ZP65 573 aa20.79■□□□□ 0.92
RAB5C-205ENST00000550013 C16orf71Q8IYS4 520 aaPredicted RBP20.79■□□□□ 0.92
RAB5C-205ENST00000550013 DNAJC5GQ8N7S2 189 aa20.79■□□□□ 0.92
RAB5C-205ENST00000550013 IL17REQ8NFR9 667 aa20.79■□□□□ 0.92
RAB5C-205ENST00000550013 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
RAB5C-205ENST00000550013 NPC1L1Q9UHC9 1359 aa20.79■□□□□ 0.92
RAB5C-205ENST00000550013 CCDC88AQ3V6T2 1871 aa20.78■□□□□ 0.92
RAB5C-205ENST00000550013 STARD3NLO95772 234 aa20.78■□□□□ 0.92
RAB5C-205ENST00000550013 RRAGCQ9HB90 399 aa20.78■□□□□ 0.92
RAB5C-205ENST00000550013 ANKRD31Q8N7Z5 1873 aa20.77■□□□□ 0.92
RAB5C-205ENST00000550013 SCN7AQ01118 1682 aa20.77■□□□□ 0.92
RAB5C-205ENST00000550013 GNAT3A8MTJ3 354 aa20.77■□□□□ 0.92
RAB5C-205ENST00000550013 PRELPP51888 382 aa20.77■□□□□ 0.92
RAB5C-205ENST00000550013 TEFQ10587 303 aa20.77■□□□□ 0.92
RAB5C-205ENST00000550013 C2CD5Q86YS7 1000 aa20.77■□□□□ 0.92
RAB5C-205ENST00000550013 HEG1Q9ULI3 1381 aa20.76■□□□□ 0.91
RAB5C-205ENST00000550013 HTRA3P83110 453 aa20.76■□□□□ 0.91
RAB5C-205ENST00000550013 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
RAB5C-205ENST00000550013 GAS2L2Q8NHY3 880 aa20.76■□□□□ 0.91
RAB5C-205ENST00000550013 TTLL6Q8N841 843 aa20.75■□□□□ 0.91
RAB5C-205ENST00000550013 A0A087WZG4 1122 aa20.74■□□□□ 0.91
RAB5C-205ENST00000550013 TBC1D9BQ66K14 1250 aa20.74■□□□□ 0.91
RAB5C-205ENST00000550013 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
RAB5C-205ENST00000550013 ZNF330Q9Y3S2 320 aaPredicted RBP20.74■□□□□ 0.91
RAB5C-205ENST00000550013 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
RAB5C-205ENST00000550013 H0YIN7 160 aa20.73■□□□□ 0.91
RAB5C-205ENST00000550013 LMNB1P20700 586 aa20.73■□□□□ 0.91
RAB5C-205ENST00000550013 FSTL1Q12841 308 aa20.73■□□□□ 0.91
RAB5C-205ENST00000550013 TBC1D2BQ9UPU7 963 aa20.73■□□□□ 0.91
RAB5C-205ENST00000550013 CCDC24Q8N4L8 307 aa20.72■□□□□ 0.91
RAB5C-205ENST00000550013 PHACTR3Q96KR7 559 aa20.72■□□□□ 0.91
RAB5C-205ENST00000550013 TEX13AQ9BXU3 409 aaPredicted RBP20.72■□□□□ 0.91
RAB5C-205ENST00000550013 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
RAB5C-205ENST00000550013 NFKBIEO00221 500 aa20.71■□□□□ 0.91
RAB5C-205ENST00000550013 KCNQ3O43525 872 aa20.71■□□□□ 0.91
RAB5C-205ENST00000550013 A1BGP04217 495 aa20.71■□□□□ 0.91
RAB5C-205ENST00000550013 FMNL2Q96PY5 1086 aa20.71■□□□□ 0.91
RAB5C-205ENST00000550013 ZC3H4Q9UPT8 1303 aaKnown RBP20.71■□□□□ 0.91
RAB5C-205ENST00000550013 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
RAB5C-205ENST00000550013 IL6STP40189 918 aaPredicted RBP20.7■□□□□ 0.9
RAB5C-205ENST00000550013 RSPH6AQ9H0K4 717 aa20.7■□□□□ 0.9
RAB5C-205ENST00000550013 PRR5LQ6MZQ0 368 aa20.69■□□□□ 0.9
RAB5C-205ENST00000550013 ZNF622Q969S3 477 aaKnown RBP eCLIP20.69■□□□□ 0.9
RAB5C-205ENST00000550013 ZNF219Q9P2Y4 722 aaPredicted RBP20.69■□□□□ 0.9
RAB5C-205ENST00000550013 BCORQ6W2J9 1755 aa20.69■□□□□ 0.9
RAB5C-205ENST00000550013 GLTPD2A6NH11 291 aa20.68■□□□□ 0.9
RAB5C-205ENST00000550013 CAMTA2O94983 1202 aa20.68■□□□□ 0.9
RAB5C-205ENST00000550013 BRIP1Q9BX63 1249 aa20.68■□□□□ 0.9
RAB5C-205ENST00000550013 CACNA1SQ13698 1873 aa20.68■□□□□ 0.9
RAB5C-205ENST00000550013 FER1L6Q2WGJ9 1857 aa20.67■□□□□ 0.9
RAB5C-205ENST00000550013 BTBD11A6QL63 1104 aa20.67■□□□□ 0.9
RAB5C-205ENST00000550013 SMC1BQ8NDV3 1235 aa20.67■□□□□ 0.9
RAB5C-205ENST00000550013 KLRG1Q96E93 195 aa20.67■□□□□ 0.9
RAB5C-205ENST00000550013 DICER1Q9UPY3 1922 aaKnown RBP20.66■□□□□ 0.9
RAB5C-205ENST00000550013 C21orf2O43822 256 aa20.66■□□□□ 0.9
RAB5C-205ENST00000550013 PDE6BP35913 854 aa20.66■□□□□ 0.9
RAB5C-205ENST00000550013 PIP4K2AP48426 406 aaPredicted RBP20.66■□□□□ 0.9
RAB5C-205ENST00000550013 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
RAB5C-205ENST00000550013 SLX4Q8IY92 1834 aa20.65■□□□□ 0.9
RAB5C-205ENST00000550013 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
RAB5C-205ENST00000550013 VEGFAP15692 232 aaPredicted RBP20.65■□□□□ 0.9
RAB5C-205ENST00000550013 NPM2Q86SE8 214 aaKnown RBP20.64■□□□□ 0.89
RAB5C-205ENST00000550013 DZIP3Q86Y13 1208 aaKnown RBP20.64■□□□□ 0.89
RAB5C-205ENST00000550013 CNBD1Q8NA66 436 aa20.64■□□□□ 0.89
RAB5C-205ENST00000550013 SETDB2Q96T68 719 aa20.64■□□□□ 0.89
RAB5C-205ENST00000550013 PDZRN3Q9UPQ7 1066 aa20.64■□□□□ 0.89
RAB5C-205ENST00000550013 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
RAB5C-205ENST00000550013 MCM10Q7L590 875 aa20.63■□□□□ 0.89
RAB5C-205ENST00000550013 JMYQ8N9B5 988 aa20.63■□□□□ 0.89
RAB5C-205ENST00000550013 NPHP1O15259 732 aa20.62■□□□□ 0.89
RAB5C-205ENST00000550013 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms