RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 COL23A1Q86Y22 540 aaPredicted RBP15.6■□□□□ 0.09
PFDN5-208ENST00000549995 MTFR1LQ9H019 292 aa15.6■□□□□ 0.09
PFDN5-208ENST00000549995 CCDC87Q9NVE4 849 aa15.6■□□□□ 0.09
PFDN5-208ENST00000549995 IFT57Q9NWB7 429 aa15.6■□□□□ 0.09
PFDN5-208ENST00000549995 GNPATO15228 680 aa15.59■□□□□ 0.09
PFDN5-208ENST00000549995 SNRPA1P09661 255 aaKnown RBP15.59■□□□□ 0.09
PFDN5-208ENST00000549995 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
PFDN5-208ENST00000549995 ZNF521Q96K83 1311 aa15.59■□□□□ 0.09
PFDN5-208ENST00000549995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.58■□□□□ 0.08
PFDN5-208ENST00000549995 GIGYF1O75420 1035 aaPredicted RBP15.58■□□□□ 0.08
PFDN5-208ENST00000549995 STARD3NLO95772 234 aa15.58■□□□□ 0.08
PFDN5-208ENST00000549995 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.08
PFDN5-208ENST00000549995 MIER1Q8N108 512 aa15.58■□□□□ 0.08
PFDN5-208ENST00000549995 TSPYL4Q9UJ04 414 aa15.58■□□□□ 0.08
PFDN5-208ENST00000549995 ZBTB1Q9Y2K1 713 aa15.58■□□□□ 0.08
PFDN5-208ENST00000549995 RTCBQ9Y3I0 505 aaKnown RBP15.58■□□□□ 0.08
PFDN5-208ENST00000549995 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
PFDN5-208ENST00000549995 PTGER2P43116 358 aa15.57■□□□□ 0.08
PFDN5-208ENST00000549995 GNAI1P63096 354 aa15.57■□□□□ 0.08
PFDN5-208ENST00000549995 MIS18AQ9NYP9 233 aa15.57■□□□□ 0.08
PFDN5-208ENST00000549995 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
PFDN5-208ENST00000549995 COL15A1P39059 1388 aa15.57■□□□□ 0.08
PFDN5-208ENST00000549995 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
PFDN5-208ENST00000549995 HOXB7P09629 217 aa15.56■□□□□ 0.08
PFDN5-208ENST00000549995 EIF5P55010 431 aaKnown RBP15.56■□□□□ 0.08
PFDN5-208ENST00000549995 WDR63Q8IWG1 891 aa15.56■□□□□ 0.08
PFDN5-208ENST00000549995 SPON1Q9HCB6 807 aa15.56■□□□□ 0.08
PFDN5-208ENST00000549995 USP42Q9H9J4 1324 aaKnown RBP15.55■□□□□ 0.08
PFDN5-208ENST00000549995 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
PFDN5-208ENST00000549995 IL6STP40189 918 aaPredicted RBP15.55■□□□□ 0.08
PFDN5-208ENST00000549995 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
PFDN5-208ENST00000549995 RGL2O15211 777 aa15.54■□□□□ 0.08
PFDN5-208ENST00000549995 TRAPPC3LQ5T215 181 aa15.54■□□□□ 0.08
PFDN5-208ENST00000549995 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
PFDN5-208ENST00000549995 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
PFDN5-208ENST00000549995 SRCAPQ6ZRS2 3230 aa15.54■□□□□ 0.08
PFDN5-208ENST00000549995 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
PFDN5-208ENST00000549995 KIAA1551Q9HCM1 1747 aa15.53■□□□□ 0.08
PFDN5-208ENST00000549995 ANKRD36CQ5JPF3 1778 aa15.52■□□□□ 0.08
PFDN5-208ENST00000549995 NBPF26B4DH59 902 aa15.52■□□□□ 0.08
PFDN5-208ENST00000549995 ZBTB7AO95365 584 aa15.52■□□□□ 0.08
PFDN5-208ENST00000549995 NBPF10Q6P3W6 841 aaKnown RBP15.52■□□□□ 0.08
PFDN5-208ENST00000549995 NBPF15Q8N660 670 aa15.52■□□□□ 0.08
PFDN5-208ENST00000549995 NUP98P52948 1817 aa15.52■□□□□ 0.07
PFDN5-208ENST00000549995 AFDNP55196 1824 aaKnown RBP15.52■□□□□ 0.07
PFDN5-208ENST00000549995 A0A087WZG4 1122 aa15.51■□□□□ 0.07
PFDN5-208ENST00000549995 PHF14O94880 888 aa15.51■□□□□ 0.07
PFDN5-208ENST00000549995 A1BGP04217 495 aa15.51■□□□□ 0.07
PFDN5-208ENST00000549995 GYS1P13807 737 aa15.51■□□□□ 0.07
PFDN5-208ENST00000549995 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
PFDN5-208ENST00000549995 LRP10Q7Z4F1 713 aa15.51■□□□□ 0.07
PFDN5-208ENST00000549995 NARFQ9UHQ1 456 aa15.51■□□□□ 0.07
PFDN5-208ENST00000549995 RFC4P35249 363 aa15.49■□□□□ 0.07
PFDN5-208ENST00000549995 FANCIQ9NVI1 1328 aa15.48■□□□□ 0.07
PFDN5-208ENST00000549995 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
PFDN5-208ENST00000549995 PDIA6Q15084 440 aa15.48■□□□□ 0.07
PFDN5-208ENST00000549995 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
PFDN5-208ENST00000549995 NLGN1Q8N2Q7 840 aa15.48■□□□□ 0.07
PFDN5-208ENST00000549995 BCL2L12Q9HB09 334 aa15.48■□□□□ 0.07
PFDN5-208ENST00000549995 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
PFDN5-208ENST00000549995 LAS1LQ9Y4W2 734 aaKnown RBP15.47■□□□□ 0.07
PFDN5-208ENST00000549995 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
PFDN5-208ENST00000549995 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
PFDN5-208ENST00000549995 BRCA1P38398 1863 aaKnown RBP15.46■□□□□ 0.07
PFDN5-208ENST00000549995 C10orf71Q711Q0 1435 aa15.46■□□□□ 0.07
PFDN5-208ENST00000549995 CAMTA2O94983 1202 aa15.46■□□□□ 0.07
PFDN5-208ENST00000549995 POLD1P28340 1107 aa15.46■□□□□ 0.07
PFDN5-208ENST00000549995 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
PFDN5-208ENST00000549995 SRP68Q9UHB9 627 aaKnown RBP15.46■□□□□ 0.07
PFDN5-208ENST00000549995 ATP10DQ9P241 1426 aa15.45■□□□□ 0.06
PFDN5-208ENST00000549995 MSH5O43196 834 aa15.45■□□□□ 0.06
PFDN5-208ENST00000549995 TM4SF1P30408 202 aa15.45■□□□□ 0.06
PFDN5-208ENST00000549995 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
PFDN5-208ENST00000549995 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
PFDN5-208ENST00000549995 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
PFDN5-208ENST00000549995 TSR2Q969E8 191 aaKnown RBP15.45■□□□□ 0.06
PFDN5-208ENST00000549995 ARXQ96QS3 562 aa15.45■□□□□ 0.06
PFDN5-208ENST00000549995 ANKRD31Q8N7Z5 1873 aa15.44■□□□□ 0.06
PFDN5-208ENST00000549995 ZPR1O75312 459 aa15.44■□□□□ 0.06
PFDN5-208ENST00000549995 FKBP8Q14318 412 aa15.44■□□□□ 0.06
PFDN5-208ENST00000549995 CLEC4GQ6UXB4 293 aa15.44■□□□□ 0.06
PFDN5-208ENST00000549995 TRMT2AQ8IZ69 625 aaKnown RBP15.44■□□□□ 0.06
PFDN5-208ENST00000549995 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
PFDN5-208ENST00000549995 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
PFDN5-208ENST00000549995 ERVV-1B6SEH8 477 aa15.43■□□□□ 0.06
PFDN5-208ENST00000549995 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
PFDN5-208ENST00000549995 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
PFDN5-208ENST00000549995 MSL1Q68DK7 614 aa15.43■□□□□ 0.06
PFDN5-208ENST00000549995 DZIP3Q86Y13 1208 aaKnown RBP15.43■□□□□ 0.06
PFDN5-208ENST00000549995 MYH16Q9H6N6 1097 aa15.43■□□□□ 0.06
PFDN5-208ENST00000549995 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 E9PSI1 815 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 MMP10P09238 476 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 DDR1Q08345 913 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 PROSER3Q2NL68 480 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 TSPYL6Q8N831 410 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
PFDN5-208ENST00000549995 MAP3K15Q6ZN16 1313 aa15.42■□□□□ 0.06
PFDN5-208ENST00000549995 IBTKQ9P2D0 1353 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms