RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 COL17A1Q9UMD9 1497 aaPredicted RBP9.88□□□□□ -0.83
UBE2N-204ENST00000549833 PLEKHM2Q8IWE5 1019 aa9.88□□□□□ -0.83
UBE2N-204ENST00000549833 AGBL1Q96MI9 1066 aa9.88□□□□□ -0.83
UBE2N-204ENST00000549833 OSBPL3Q9H4L5 887 aa9.88□□□□□ -0.83
UBE2N-204ENST00000549833 PHLDB1Q86UU1 1377 aa9.88□□□□□ -0.83
UBE2N-204ENST00000549833 ADGRL1O94910 1474 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 PTPN23Q9H3S7 1636 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 NCOA4Q13772 614 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 EFCAB2Q5VUJ9 269 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 ZFP42Q96MM3 310 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 GMPR2Q9P2T1 348 aaKnown RBP9.87□□□□□ -0.83
UBE2N-204ENST00000549833 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 MYOM3Q5VTT5 1437 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 SYCP2Q9BX26 1530 aa9.87□□□□□ -0.83
UBE2N-204ENST00000549833 PTGIRP43119 386 aa9.86□□□□□ -0.83
UBE2N-204ENST00000549833 TRIM47Q96LD4 638 aa9.86□□□□□ -0.83
UBE2N-204ENST00000549833 PPP1R12CQ9BZL4 782 aa9.86□□□□□ -0.83
UBE2N-204ENST00000549833 CFDP1Q9UEE9 299 aaPredicted RBP9.86□□□□□ -0.83
UBE2N-204ENST00000549833 ARHGEF12Q9NZN5 1544 aa9.86□□□□□ -0.83
UBE2N-204ENST00000549833 CAMSAP2Q08AD1 1489 aa9.85□□□□□ -0.83
UBE2N-204ENST00000549833 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
UBE2N-204ENST00000549833 SPINT1O43278 529 aa9.85□□□□□ -0.83
UBE2N-204ENST00000549833 DEPDC4Q8N2C3 294 aa9.85□□□□□ -0.83
UBE2N-204ENST00000549833 CCDC97Q96F63 343 aaPredicted RBP9.85□□□□□ -0.83
UBE2N-204ENST00000549833 MAFBQ9Y5Q3 323 aaPredicted RBP9.85□□□□□ -0.83
UBE2N-204ENST00000549833 ZNF644Q9H582 1327 aaPredicted RBP9.84□□□□□ -0.83
UBE2N-204ENST00000549833 CROCC2H7BZ55 1655 aa9.84□□□□□ -0.83
UBE2N-204ENST00000549833 SCAPERQ9BY12 1400 aa9.84□□□□□ -0.83
UBE2N-204ENST00000549833 ZNF395Q9H8N7 513 aaPredicted RBP9.84□□□□□ -0.83
UBE2N-204ENST00000549833 ARHGEF10LQ9HCE6 1279 aa9.84□□□□□ -0.83
UBE2N-204ENST00000549833 TFIP11Q9UBB9 837 aaKnown RBP9.84□□□□□ -0.83
UBE2N-204ENST00000549833 DENND4BO75064 1496 aaPredicted RBP9.84□□□□□ -0.83
UBE2N-204ENST00000549833 FGD6Q6ZV73 1430 aa9.83□□□□□ -0.84
UBE2N-204ENST00000549833 C11orf95C9JLR9 678 aaPredicted RBP9.83□□□□□ -0.84
UBE2N-204ENST00000549833 RAPGEF3O95398 923 aa9.83□□□□□ -0.84
UBE2N-204ENST00000549833 GNRH1P01148 92 aa9.83□□□□□ -0.84
UBE2N-204ENST00000549833 TRIM50Q86XT4 487 aa9.83□□□□□ -0.84
UBE2N-204ENST00000549833 POLMQ9NP87 494 aaPredicted RBP9.83□□□□□ -0.84
UBE2N-204ENST00000549833 KIDINS220Q9ULH0 1771 aa9.83□□□□□ -0.84
UBE2N-204ENST00000549833 POGZQ7Z3K3 1410 aa9.82□□□□□ -0.84
UBE2N-204ENST00000549833 MIA2Q96PC5 1412 aa9.82□□□□□ -0.84
UBE2N-204ENST00000549833 ESCO1Q5FWF5 840 aa9.82□□□□□ -0.84
UBE2N-204ENST00000549833 KDF1Q8NAX2 398 aaPredicted RBP9.82□□□□□ -0.84
UBE2N-204ENST00000549833 PLEKHH2Q8IVE3 1493 aa9.82□□□□□ -0.84
UBE2N-204ENST00000549833 KDM5CP41229 1560 aa9.82□□□□□ -0.84
UBE2N-204ENST00000549833 TRAPPC8Q9Y2L5 1435 aa9.82□□□□□ -0.84
UBE2N-204ENST00000549833 ARHGEF5Q12774 1597 aa9.81□□□□□ -0.84
UBE2N-204ENST00000549833 HECW2Q9P2P5 1572 aa9.81□□□□□ -0.84
UBE2N-204ENST00000549833 ATP1A2P50993 1020 aa9.81□□□□□ -0.84
UBE2N-204ENST00000549833 HNRNPMP52272 730 aaKnown RBP eCLIP9.81□□□□□ -0.841e-9■■□□□ 13.3
UBE2N-204ENST00000549833 GTF2IP78347 998 aa9.81□□□□□ -0.84
UBE2N-204ENST00000549833 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
UBE2N-204ENST00000549833 INSM2Q96T92 566 aaPredicted RBP9.81□□□□□ -0.84
UBE2N-204ENST00000549833 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
UBE2N-204ENST00000549833 DNMT1P26358 1616 aaKnown RBP9.81□□□□□ -0.84
UBE2N-204ENST00000549833 ZMYM4Q5VZL5 1548 aa9.81□□□□□ -0.84
UBE2N-204ENST00000549833 ADGBQ8N7X0 1667 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 TCOF1Q13428 1488 aaKnown RBP9.8□□□□□ -0.84
UBE2N-204ENST00000549833 MBD5Q9P267 1494 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 A0A1W2PRU2 124 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 TTLL8A6PVC2 850 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 MEN1O00255 615 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
UBE2N-204ENST00000549833 PSME1Q06323 249 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 CLN3Q13286 438 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 RAB6BQ9NRW1 208 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 ABCA6Q8N139 1617 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 KIAA1107Q9UPP5 1409 aa9.8□□□□□ -0.84
UBE2N-204ENST00000549833 SOS2Q07890 1332 aaPredicted RBP9.8□□□□□ -0.84
UBE2N-204ENST00000549833 INO80Q9ULG1 1556 aaPredicted RBP9.8□□□□□ -0.84
UBE2N-204ENST00000549833 ZNF518AQ6AHZ1 1483 aa9.79□□□□□ -0.84
UBE2N-204ENST00000549833 SIGLEC1Q9BZZ2 1709 aa9.79□□□□□ -0.84
UBE2N-204ENST00000549833 ARHGEF40Q8TER5 1519 aa9.79□□□□□ -0.84
UBE2N-204ENST00000549833 MAN1A2O60476 641 aa9.79□□□□□ -0.84
UBE2N-204ENST00000549833 MKRN1Q9UHC7 482 aaKnown RBP9.79□□□□□ -0.84
UBE2N-204ENST00000549833 ZFYVE16Q7Z3T8 1539 aa9.78□□□□□ -0.84
UBE2N-204ENST00000549833 CTSOP43234 321 aaPredicted RBP9.78□□□□□ -0.84
UBE2N-204ENST00000549833 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
UBE2N-204ENST00000549833 AFAP1Q8N556 730 aa9.78□□□□□ -0.84
UBE2N-204ENST00000549833 CCDC141Q6ZP82 1450 aa9.78□□□□□ -0.84
UBE2N-204ENST00000549833 ATP7AQ04656 1500 aa9.77□□□□□ -0.84
UBE2N-204ENST00000549833 DIP2CQ9Y2E4 1556 aa9.77□□□□□ -0.85
UBE2N-204ENST00000549833 POTECB2RU33 542 aa9.77□□□□□ -0.85
UBE2N-204ENST00000549833 SNRPBP14678 240 aaKnown RBP9.77□□□□□ -0.85
UBE2N-204ENST00000549833 GPC1P35052 558 aa9.77□□□□□ -0.85
UBE2N-204ENST00000549833 GDF10P55107 478 aa9.77□□□□□ -0.85
UBE2N-204ENST00000549833 FAM50AQ14320 339 aaKnown RBP9.77□□□□□ -0.85
UBE2N-204ENST00000549833 FOXD4L5Q5VV16 416 aaPredicted RBP9.77□□□□□ -0.85
UBE2N-204ENST00000549833 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
UBE2N-204ENST00000549833 ETNK1Q9HBU6 452 aa9.77□□□□□ -0.85
UBE2N-204ENST00000549833 PCDHGA11Q9Y5H2 935 aa9.77□□□□□ -0.85
UBE2N-204ENST00000549833 MAST1Q9Y2H9 1570 aa9.76□□□□□ -0.85
UBE2N-204ENST00000549833 YEATS2Q9ULM3 1422 aa9.76□□□□□ -0.85
UBE2N-204ENST00000549833 WASLO00401 505 aaPredicted RBP9.76□□□□□ -0.85
UBE2N-204ENST00000549833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms