RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 CFAP44Q96MT7 982 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 MBIPQ9NS73 344 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 USP35Q9P2H5 1018 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 LAS1LQ9Y4W2 734 aaKnown RBP10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 CHL1O00533 1208 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 GNAI1P63096 354 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 EXOSC9Q06265 439 aaKnown RBP10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 SPG7Q9UQ90 795 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 SPATA31A5Q5VU36 1347 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 SPATA31A7Q8IWB4 1347 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 ITGB4P16144 1822 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 MPRIPQ6WCQ1 1025 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 ZCRB1Q8TBF4 217 aaKnown RBP10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 GLI3P10071 1580 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 TNS2Q63HR2 1409 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 PAPPAQ13219 1627 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 MIS18AQ9NYP9 233 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 GTF3C3Q9Y5Q9 886 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 THSD7AQ9UPZ6 1657 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 PCDH11XQ9BZA7 1347 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 PCDH11YQ9BZA8 1340 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 VPS72Q15906 364 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 KRT24Q2M2I5 525 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 TSPYL6Q8N831 410 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 THRAP3Q9Y2W1 955 aaKnown RBP10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 BCAR3O75815 825 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 TAF7Q15545 349 aaPredicted RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 C8orf58Q8NAV2 365 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 L3MBTL3Q96JM7 780 aaPredicted RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 TSPYL4Q9UJ04 414 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 ATRNO75882 1429 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 C5P01031 1676 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 KAT6BQ8WYB5 2073 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 VAMP4O75379 141 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 CT47B1P0C2W7 299 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 C3orf67Q6ZVT6 689 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 DCAF5Q96JK2 942 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 GJD4Q96KN9 370 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 BABAM1Q9NWV8 329 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 RGS12O14924 1447 aa10.46□□□□□ -0.74
DEPDC4-207ENST00000549249 CACNA1FO60840 1977 aa10.46□□□□□ -0.74
DEPDC4-207ENST00000549249 STK25O00506 426 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 KCNQ3O43525 872 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 PLIN1O60240 522 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 TEFQ10587 303 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 DDX54Q8TDD1 881 aaKnown RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 SLC52A2Q9HAB3 445 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 ELL2O00472 640 aaPredicted RBP10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 SSH1Q8WYL5 1049 aa10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 BTBD11A6QL63 1104 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 EXOC5O00471 708 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 EFCAB3Q8N7B9 438 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 MARVELD3Q96A59 401 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 LAMB4A4D0S4 1761 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 BRWD3Q6RI45 1802 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 HEG1Q9ULI3 1381 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 C20orf194Q5TEA3 1177 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 NFATC2IPQ8NCF5 419 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 TNNQ9UQP3 1299 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 TCERG1O14776 1098 aaKnown RBP10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 NEFLP07196 543 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 CABP4P57796 275 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 DDB1Q16531 1140 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 ALDH1L2Q3SY69 923 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 MARCH10Q8NA82 808 aaPredicted RBP10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SBF2Q86WG5 1849 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
DEPDC4-207ENST00000549249 MRPL50Q8N5N7 158 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms