RNA–Protein interactions for RNA: ENST00000549076.1

ARFGAP1-222, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-222ENST00000549076 A0A087WZG4 1122 aa22.45■■□□□ 1.18
ARFGAP1-222ENST00000549076 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
ARFGAP1-222ENST00000549076 USPL1Q5W0Q7 1092 aa22.45■■□□□ 1.18
ARFGAP1-222ENST00000549076 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.18
ARFGAP1-222ENST00000549076 NARFQ9UHQ1 456 aa22.45■■□□□ 1.18
ARFGAP1-222ENST00000549076 COL15A1P39059 1388 aa22.45■■□□□ 1.18
ARFGAP1-222ENST00000549076 UBR2Q8IWV8 1755 aa22.45■■□□□ 1.18
ARFGAP1-222ENST00000549076 DDX10Q13206 875 aaKnown RBP22.44■■□□□ 1.18
ARFGAP1-222ENST00000549076 WWC3Q9ULE0 1092 aa22.44■■□□□ 1.18
ARFGAP1-222ENST00000549076 C10orf71Q711Q0 1435 aa22.43■■□□□ 1.18
ARFGAP1-222ENST00000549076 MCM10Q7L590 875 aa22.43■■□□□ 1.18
ARFGAP1-222ENST00000549076 SIPA1L3O60292 1781 aaPredicted RBP22.42■■□□□ 1.18
ARFGAP1-222ENST00000549076 A0A0G2JLW4 131 aa22.41■■□□□ 1.18
ARFGAP1-222ENST00000549076 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
ARFGAP1-222ENST00000549076 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
ARFGAP1-222ENST00000549076 TM4SF1P30408 202 aa22.4■■□□□ 1.18
ARFGAP1-222ENST00000549076 EIF5P55010 431 aaKnown RBP22.4■■□□□ 1.18
ARFGAP1-222ENST00000549076 DDR1Q08345 913 aa22.4■■□□□ 1.18
ARFGAP1-222ENST00000549076 KIF13BQ9NQT8 1826 aa22.4■■□□□ 1.18
ARFGAP1-222ENST00000549076 DPEP1P16444 411 aa22.39■■□□□ 1.17
ARFGAP1-222ENST00000549076 BCS1LQ9Y276 419 aa22.39■■□□□ 1.17
ARFGAP1-222ENST00000549076 ZNF330Q9Y3S2 320 aaPredicted RBP22.39■■□□□ 1.17
ARFGAP1-222ENST00000549076 POLRMTO00411 1230 aaKnown RBP22.38■■□□□ 1.17
ARFGAP1-222ENST00000549076 KCNQ3O43525 872 aa22.38■■□□□ 1.17
ARFGAP1-222ENST00000549076 IL6STP40189 918 aaPredicted RBP22.38■■□□□ 1.17
ARFGAP1-222ENST00000549076 DCTN1Q14203 1278 aa22.38■■□□□ 1.17
ARFGAP1-222ENST00000549076 TAF7Q15545 349 aaPredicted RBP22.38■■□□□ 1.17
ARFGAP1-222ENST00000549076 SNRPA1P09661 255 aaKnown RBP22.37■■□□□ 1.17
ARFGAP1-222ENST00000549076 NFIXQ14938 502 aa22.37■■□□□ 1.17
ARFGAP1-222ENST00000549076 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
ARFGAP1-222ENST00000549076 PIM2Q9P1W9 311 aa22.36■■□□□ 1.17
ARFGAP1-222ENST00000549076 PNISRQ8TF01 805 aaKnown RBP22.35■■□□□ 1.17
ARFGAP1-222ENST00000549076 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
ARFGAP1-222ENST00000549076 A1BGP04217 495 aa22.34■■□□□ 1.17
ARFGAP1-222ENST00000549076 N4BP2Q86UW6 1770 aaPredicted RBP22.34■■□□□ 1.17
ARFGAP1-222ENST00000549076 MYBBP1AQ9BQG0 1328 aaKnown RBP22.33■■□□□ 1.17
ARFGAP1-222ENST00000549076 SERPINB2P05120 415 aa22.33■■□□□ 1.17
ARFGAP1-222ENST00000549076 DALRD3Q5D0E6 543 aaKnown RBP22.33■■□□□ 1.17
ARFGAP1-222ENST00000549076 BCL2L12Q9HB09 334 aa22.33■■□□□ 1.17
ARFGAP1-222ENST00000549076 TBC1D2BQ9UPU7 963 aa22.33■■□□□ 1.17
ARFGAP1-222ENST00000549076 BICDL1Q6ZP65 573 aa22.32■■□□□ 1.16
ARFGAP1-222ENST00000549076 ARHGAP27Q6ZUM4 889 aa22.32■■□□□ 1.16
ARFGAP1-222ENST00000549076 USP16Q9Y5T5 823 aa22.32■■□□□ 1.16
ARFGAP1-222ENST00000549076 GIGYF1O75420 1035 aaPredicted RBP22.31■■□□□ 1.16
ARFGAP1-222ENST00000549076 KIAA1551Q9HCM1 1747 aa22.31■■□□□ 1.16
ARFGAP1-222ENST00000549076 KCNA3P22001 575 aa22.3■■□□□ 1.16
ARFGAP1-222ENST00000549076 CHRNA5P30532 468 aa22.29■■□□□ 1.16
ARFGAP1-222ENST00000549076 DZIP3Q86Y13 1208 aaKnown RBP22.29■■□□□ 1.16
ARFGAP1-222ENST00000549076 MIS18AQ9NYP9 233 aa22.29■■□□□ 1.16
ARFGAP1-222ENST00000549076 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
ARFGAP1-222ENST00000549076 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
ARFGAP1-222ENST00000549076 GPBP1L1Q9HC44 474 aaPredicted RBP22.28■■□□□ 1.16
ARFGAP1-222ENST00000549076 PRAMEF22A3QJZ6 481 aa22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 NPHP1O15259 732 aa22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 LMOD3Q0VAK6 560 aa22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 TBC1D9BQ66K14 1250 aa22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 SETDB2Q96T68 719 aa22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 ZNF652Q9Y2D9 606 aa22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 DLG5Q8TDM6 1919 aa22.27■■□□□ 1.16
ARFGAP1-222ENST00000549076 CAMTA2O94983 1202 aa22.26■■□□□ 1.15
ARFGAP1-222ENST00000549076 RIPK4P57078 832 aa22.26■■□□□ 1.15
ARFGAP1-222ENST00000549076 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
ARFGAP1-222ENST00000549076 AFDNP55196 1824 aaKnown RBP22.25■■□□□ 1.15
ARFGAP1-222ENST00000549076 H0YIN7 160 aa22.25■■□□□ 1.15
ARFGAP1-222ENST00000549076 C1QTNF8P60827 252 aa22.25■■□□□ 1.15
ARFGAP1-222ENST00000549076 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
ARFGAP1-222ENST00000549076 PDZRN3Q9UPQ7 1066 aa22.25■■□□□ 1.15
ARFGAP1-222ENST00000549076 ADCY9O60503 1353 aa22.25■■□□□ 1.15
ARFGAP1-222ENST00000549076 BRCA1P38398 1863 aaKnown RBP22.24■■□□□ 1.15
ARFGAP1-222ENST00000549076 PIP4K2AP48426 406 aaPredicted RBP22.24■■□□□ 1.15
ARFGAP1-222ENST00000549076 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
ARFGAP1-222ENST00000549076 C2CD5Q86YS7 1000 aa22.24■■□□□ 1.15
ARFGAP1-222ENST00000549076 PDE6BP35913 854 aa22.23■■□□□ 1.15
ARFGAP1-222ENST00000549076 ZNF526Q8TF50 670 aaPredicted RBP22.23■■□□□ 1.15
ARFGAP1-222ENST00000549076 SCN7AQ01118 1682 aa22.23■■□□□ 1.15
ARFGAP1-222ENST00000549076 NRXN2Q9P2S2 1712 aa22.23■■□□□ 1.15
ARFGAP1-222ENST00000549076 EIF4A1P60842 406 aaKnown RBP22.22■■□□□ 1.15
ARFGAP1-222ENST00000549076 CNBD1Q8NA66 436 aa22.22■■□□□ 1.15
ARFGAP1-222ENST00000549076 BRIP1Q9BX63 1249 aa22.22■■□□□ 1.15
ARFGAP1-222ENST00000549076 ARFGEF1Q9Y6D6 1849 aa22.22■■□□□ 1.15
ARFGAP1-222ENST00000549076 NBPF26B4DH59 902 aa22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 RGL2O15211 777 aa22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 TMPOP42166 694 aaKnown RBP22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 ST5P78524 1137 aa22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 NBPF10Q6P3W6 841 aaKnown RBP22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 NBPF15Q8N660 670 aa22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 TTLL6Q8N841 843 aa22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 TSPYL4Q9UJ04 414 aa22.21■■□□□ 1.15
ARFGAP1-222ENST00000549076 PRR5LQ6MZQ0 368 aa22.2■■□□□ 1.14
ARFGAP1-222ENST00000549076 BABAM1Q9NWV8 329 aa22.2■■□□□ 1.14
ARFGAP1-222ENST00000549076 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
ARFGAP1-222ENST00000549076 RUNDC1Q96C34 613 aa22.19■■□□□ 1.14
ARFGAP1-222ENST00000549076 NBPF5PQ86XG9 351 aaPredicted RBP22.18■■□□□ 1.14
ARFGAP1-222ENST00000549076 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
ARFGAP1-222ENST00000549076 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
ARFGAP1-222ENST00000549076 C9orf131Q5VYM1 1079 aa22.17■■□□□ 1.14
ARFGAP1-222ENST00000549076 ZNF622Q969S3 477 aaKnown RBP eCLIP22.17■■□□□ 1.14
ARFGAP1-222ENST00000549076 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms