RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 LOC102724428A0A0B4J2F2 783 aa36.81■■■■□ 3.48
BRF1-213ENST00000548421 PLIN1O60240 522 aa36.81■■■■□ 3.48
BRF1-213ENST00000548421 TRIM37O94972 964 aa36.81■■■■□ 3.48
BRF1-213ENST00000548421 SIK1P57059 783 aa36.81■■■■□ 3.48
BRF1-213ENST00000548421 CHPF2Q9P2E5 772 aa36.8■■■■□ 3.48
BRF1-213ENST00000548421 DBF4Q9UBU7 674 aaPredicted RBP36.8■■■■□ 3.48
BRF1-213ENST00000548421 DNAJC10Q8IXB1 793 aa36.78■■■■□ 3.48
BRF1-213ENST00000548421 NOB1Q9ULX3 412 aaKnown RBP36.78■■■■□ 3.48
BRF1-213ENST00000548421 IPO8O15397 1037 aaKnown RBP36.76■■■■□ 3.48
BRF1-213ENST00000548421 ZKSCAN2Q63HK3 967 aa36.76■■■■□ 3.48
BRF1-213ENST00000548421 ERBB4Q15303 1308 aa36.76■■■■□ 3.47
BRF1-213ENST00000548421 ATP6V1AP38606 617 aa36.75■■■■□ 3.47
BRF1-213ENST00000548421 STARD3NLO95772 234 aa36.75■■■■□ 3.47
BRF1-213ENST00000548421 DDX21Q9NR30 783 aaKnown RBP eCLIP36.75■■■■□ 3.47
BRF1-213ENST00000548421 COL5A3P25940 1745 aaPredicted RBP36.74■■■■□ 3.47
BRF1-213ENST00000548421 NEFLP07196 543 aa36.74■■■■□ 3.47
BRF1-213ENST00000548421 TNS1Q9HBL0 1735 aaKnown RBP36.73■■■■□ 3.47
BRF1-213ENST00000548421 ARHGAP45Q92619 1136 aa36.73■■■■□ 3.47
BRF1-213ENST00000548421 PTPRCP08575 1304 aa36.72■■■■□ 3.47
BRF1-213ENST00000548421 PDIA6Q15084 440 aa36.72■■■■□ 3.47
BRF1-213ENST00000548421 ATF7IPQ6VMQ6 1270 aa36.72■■■■□ 3.47
BRF1-213ENST00000548421 HYPKQ9NX55 129 aa36.71■■■■□ 3.47
BRF1-213ENST00000548421 PROSER3Q2NL68 480 aa36.7■■■■□ 3.47
BRF1-213ENST00000548421 G2E3Q7L622 706 aa36.7■■■■□ 3.47
BRF1-213ENST00000548421 ANXA1P04083 346 aa36.69■■■■□ 3.46
BRF1-213ENST00000548421 CYP19A1P11511 503 aaPredicted RBP36.69■■■■□ 3.46
BRF1-213ENST00000548421 FLIIQ13045 1269 aa36.69■■■■□ 3.46
BRF1-213ENST00000548421 TRIM27P14373 513 aa36.69■■■■□ 3.46
BRF1-213ENST00000548421 ITPK1Q13572 414 aa36.69■■■■□ 3.46
BRF1-213ENST00000548421 A1BGP04217 495 aa36.67■■■■□ 3.46
BRF1-213ENST00000548421 MS4A1P11836 297 aa36.67■■■■□ 3.46
BRF1-213ENST00000548421 PDE3AQ14432 1141 aa36.67■■■■□ 3.46
BRF1-213ENST00000548421 API5Q9BZZ5 524 aaKnown RBP36.67■■■■□ 3.46
BRF1-213ENST00000548421 PHAXQ9H814 394 aaKnown RBP36.67■■■■□ 3.46
BRF1-213ENST00000548421 TAF1LQ8IZX4 1826 aa36.66■■■■□ 3.46
BRF1-213ENST00000548421 RREB1Q92766 1687 aa36.66■■■■□ 3.46
BRF1-213ENST00000548421 MYL6BP14649 208 aa36.66■■■■□ 3.46
BRF1-213ENST00000548421 IRX6P78412 446 aaPredicted RBP36.66■■■■□ 3.46
BRF1-213ENST00000548421 CCNL1Q9UK58 526 aaPredicted RBP36.66■■■■□ 3.46
BRF1-213ENST00000548421 C20orf194Q5TEA3 1177 aa36.65■■■■□ 3.46
BRF1-213ENST00000548421 NBPF26B4DH59 902 aa36.64■■■■□ 3.46
BRF1-213ENST00000548421 PIP4K2AP48426 406 aaPredicted RBP36.64■■■■□ 3.46
BRF1-213ENST00000548421 NBPF14Q5TI25 921 aa36.64■■■■□ 3.46
BRF1-213ENST00000548421 NBPF10Q6P3W6 841 aaKnown RBP36.64■■■■□ 3.46
BRF1-213ENST00000548421 NBPF15Q8N660 670 aa36.64■■■■□ 3.46
BRF1-213ENST00000548421 FKBP5Q13451 457 aaPredicted RBP36.63■■■■□ 3.45
BRF1-213ENST00000548421 LRP10Q7Z4F1 713 aa36.63■■■■□ 3.45
BRF1-213ENST00000548421 FTSJ3Q8IY81 847 aaKnown RBP36.63■■■■□ 3.45
BRF1-213ENST00000548421 DZIP1LQ8IYY4 767 aaKnown RBP36.63■■■■□ 3.45
BRF1-213ENST00000548421 TNNQ9UQP3 1299 aa36.63■■■■□ 3.45
BRF1-213ENST00000548421 RGPD3A6NKT7 1758 aaPredicted RBP36.63■■■■□ 3.45
BRF1-213ENST00000548421 RGPD4Q7Z3J3 1758 aa36.63■■■■□ 3.45
BRF1-213ENST00000548421 CLUAP1Q96AJ1 413 aa36.62■■■■□ 3.45
BRF1-213ENST00000548421 MYH14Q7Z406 1995 aaKnown RBP36.61■■■■□ 3.45
BRF1-213ENST00000548421 APBA3O96018 575 aa36.61■■■■□ 3.45
BRF1-213ENST00000548421 PLSCR1O15162 318 aa36.6■■■■□ 3.45
BRF1-213ENST00000548421 CRKLP46109 303 aaKnown RBP36.59■■■■□ 3.45
BRF1-213ENST00000548421 LINC00116Q8NCU8 138 aa36.59■■■■□ 3.45
BRF1-213ENST00000548421 PANK1Q8TE04 598 aa36.59■■■■□ 3.45
BRF1-213ENST00000548421 CCDC87Q9NVE4 849 aa36.59■■■■□ 3.45
BRF1-213ENST00000548421 ABCC4O15439 1325 aa36.58■■■■□ 3.45
BRF1-213ENST00000548421 KCNQ4P56696 695 aa36.58■■■■□ 3.45
BRF1-213ENST00000548421 SLC27A3Q5K4L6 730 aa36.58■■■■□ 3.45
BRF1-213ENST00000548421 ZBTB1Q9Y2K1 713 aa36.58■■■■□ 3.45
BRF1-213ENST00000548421 RLBP1P12271 317 aa36.57■■■■□ 3.45
BRF1-213ENST00000548421 FKBP8Q14318 412 aa36.56■■■■□ 3.44
BRF1-213ENST00000548421 XAGE3Q8WTP9 111 aa36.56■■■■□ 3.44
BRF1-213ENST00000548421 CNTNAP4Q9C0A0 1308 aa36.56■■■■□ 3.44
BRF1-213ENST00000548421 DDX58O95786 925 aaKnown RBP36.56■■■■□ 3.44
BRF1-213ENST00000548421 AIMP1Q12904 312 aaKnown RBP36.56■■■■□ 3.44
BRF1-213ENST00000548421 INTS5Q6P9B9 1019 aaKnown RBP36.56■■■■□ 3.44
BRF1-213ENST00000548421 COPS6Q7L5N1 327 aa36.56■■■■□ 3.44
BRF1-213ENST00000548421 N4BP2Q86UW6 1770 aaPredicted RBP36.55■■■■□ 3.44
BRF1-213ENST00000548421 C4BP0C0L5 1744 aa36.55■■■■□ 3.44
BRF1-213ENST00000548421 IL6STP40189 918 aaPredicted RBP36.54■■■■□ 3.44
BRF1-213ENST00000548421 PXDNLA1KZ92 1463 aa36.52■■■■□ 3.44
BRF1-213ENST00000548421 CRBNQ96SW2 442 aa36.52■■■■□ 3.44
BRF1-213ENST00000548421 LRRC4BQ9NT99 713 aa36.52■■■■□ 3.44
BRF1-213ENST00000548421 ADCY9O60503 1353 aa36.52■■■■□ 3.44
BRF1-213ENST00000548421 F6X3S4 739 aa36.51■■■■□ 3.44
BRF1-213ENST00000548421 TXNRD1Q16881 649 aa36.51■■■■□ 3.44
BRF1-213ENST00000548421 RC3H1Q5TC82 1133 aaKnown RBP36.51■■■■□ 3.44
BRF1-213ENST00000548421 TMEM57Q8N5G2 664 aa36.51■■■■□ 3.44
BRF1-213ENST00000548421 PI4KAP2A4QPH2 592 aa36.5■■■■□ 3.43
BRF1-213ENST00000548421 HMGB2P26583 209 aaKnown RBP36.5■■■■□ 3.43
BRF1-213ENST00000548421 KSR2Q6VAB6 950 aa36.5■■■■□ 3.43
BRF1-213ENST00000548421 PI4KAP1Q8N8J0 262 aa36.5■■■■□ 3.43
BRF1-213ENST00000548421 COG6Q9Y2V7 657 aa36.5■■■■□ 3.43
BRF1-213ENST00000548421 ZNF330Q9Y3S2 320 aaPredicted RBP36.5■■■■□ 3.43
BRF1-213ENST00000548421 ARFGEF2Q9Y6D5 1785 aa36.5■■■■□ 3.43
BRF1-213ENST00000548421 NUP188Q5SRE5 1749 aa36.49■■■■□ 3.43
BRF1-213ENST00000548421 MVPQ14764 893 aaKnown RBP36.48■■■■□ 3.43
BRF1-213ENST00000548421 ANKRD13DQ6ZTN6 518 aa36.48■■■■□ 3.43
BRF1-213ENST00000548421 NPM2Q86SE8 214 aaKnown RBP36.48■■■■□ 3.43
BRF1-213ENST00000548421 PROM2Q8N271 834 aa36.48■■■■□ 3.43
BRF1-213ENST00000548421 DNAAF4Q8WXU2 420 aa36.48■■■■□ 3.43
BRF1-213ENST00000548421 EIF5P55010 431 aaKnown RBP36.47■■■■□ 3.43
BRF1-213ENST00000548421 SF3B2Q13435 895 aaKnown RBP36.47■■■■□ 3.43
BRF1-213ENST00000548421 SLC4A10Q6U841 1118 aa36.47■■■■□ 3.43
BRF1-213ENST00000548421 MAP3K2Q9Y2U5 619 aa36.47■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms