RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 GYS1P13807 737 aa20.98■□□□□ 0.95
DDX54-204ENST00000546898 TAF7Q15545 349 aaPredicted RBP20.98■□□□□ 0.95
DDX54-204ENST00000546898 PNISRQ8TF01 805 aaKnown RBP20.97■□□□□ 0.95
DDX54-204ENST00000546898 CD2APQ9Y5K6 639 aa20.97■□□□□ 0.95
DDX54-204ENST00000546898 SCN7AQ01118 1682 aa20.96■□□□□ 0.95
DDX54-204ENST00000546898 KCNQ3O43525 872 aa20.96■□□□□ 0.95
DDX54-204ENST00000546898 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
DDX54-204ENST00000546898 MMP10P09238 476 aa20.95■□□□□ 0.94
DDX54-204ENST00000546898 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
DDX54-204ENST00000546898 CHD4Q14839 1912 aa20.94■□□□□ 0.94
DDX54-204ENST00000546898 YY1P25490 414 aa20.94■□□□□ 0.94
DDX54-204ENST00000546898 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
DDX54-204ENST00000546898 RIPK4P57078 832 aa20.94■□□□□ 0.94
DDX54-204ENST00000546898 NLGN2Q8NFZ4 835 aa20.94■□□□□ 0.94
DDX54-204ENST00000546898 ZPR1O75312 459 aa20.93■□□□□ 0.94
DDX54-204ENST00000546898 SNRPA1P09661 255 aaKnown RBP20.93■□□□□ 0.94
DDX54-204ENST00000546898 CANXP27824 592 aaKnown RBP20.93■□□□□ 0.94
DDX54-204ENST00000546898 SRP68Q9UHB9 627 aaKnown RBP20.93■□□□□ 0.94
DDX54-204ENST00000546898 NARFQ9UHQ1 456 aa20.93■□□□□ 0.94
DDX54-204ENST00000546898 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
DDX54-204ENST00000546898 KIAA1551Q9HCM1 1747 aa20.92■□□□□ 0.94
DDX54-204ENST00000546898 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
DDX54-204ENST00000546898 A0A087WZG4 1122 aa20.92■□□□□ 0.94
DDX54-204ENST00000546898 IL6STP40189 918 aaPredicted RBP20.92■□□□□ 0.94
DDX54-204ENST00000546898 EIF5P55010 431 aaKnown RBP20.92■□□□□ 0.94
DDX54-204ENST00000546898 CCDC146Q8IYE0 955 aa20.92■□□□□ 0.94
DDX54-204ENST00000546898 C10orf71Q711Q0 1435 aa20.91■□□□□ 0.94
DDX54-204ENST00000546898 THUMPD2Q9BTF0 503 aaKnown RBP20.91■□□□□ 0.94
DDX54-204ENST00000546898 AFDNP55196 1824 aaKnown RBP20.9■□□□□ 0.94
DDX54-204ENST00000546898 USPL1Q5W0Q7 1092 aa20.9■□□□□ 0.94
DDX54-204ENST00000546898 PARP3Q9Y6F1 533 aa20.9■□□□□ 0.94
DDX54-204ENST00000546898 NRXN2Q9P2S2 1712 aa20.9■□□□□ 0.94
DDX54-204ENST00000546898 ANP32CO43423 234 aa20.89■□□□□ 0.93
DDX54-204ENST00000546898 FKBP8Q14318 412 aa20.89■□□□□ 0.93
DDX54-204ENST00000546898 BABAM1Q9NWV8 329 aa20.89■□□□□ 0.93
DDX54-204ENST00000546898 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
DDX54-204ENST00000546898 MIS18AQ9NYP9 233 aa20.88■□□□□ 0.93
DDX54-204ENST00000546898 N4BP2Q86UW6 1770 aaPredicted RBP20.87■□□□□ 0.93
DDX54-204ENST00000546898 A1BGP04217 495 aa20.87■□□□□ 0.93
DDX54-204ENST00000546898 GPR162Q16538 588 aa20.87■□□□□ 0.93
DDX54-204ENST00000546898 NPM2Q86SE8 214 aaKnown RBP20.87■□□□□ 0.93
DDX54-204ENST00000546898 RRP7AQ9Y3A4 280 aaKnown RBP20.87■□□□□ 0.93
DDX54-204ENST00000546898 BRCA1P38398 1863 aaKnown RBP20.86■□□□□ 0.93
DDX54-204ENST00000546898 PRAMEF22A3QJZ6 481 aa20.86■□□□□ 0.93
DDX54-204ENST00000546898 EIF4A1P60842 406 aaKnown RBP20.86■□□□□ 0.93
DDX54-204ENST00000546898 TM4SF1P30408 202 aa20.85■□□□□ 0.93
DDX54-204ENST00000546898 DDR1Q08345 913 aa20.85■□□□□ 0.93
DDX54-204ENST00000546898 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
DDX54-204ENST00000546898 BCL2L12Q9HB09 334 aa20.85■□□□□ 0.93
DDX54-204ENST00000546898 TSPYL4Q9UJ04 414 aa20.85■□□□□ 0.93
DDX54-204ENST00000546898 ZNF330Q9Y3S2 320 aaPredicted RBP20.85■□□□□ 0.93
DDX54-204ENST00000546898 PXDNLA1KZ92 1463 aa20.85■□□□□ 0.93
DDX54-204ENST00000546898 POLRMTO00411 1230 aaKnown RBP20.84■□□□□ 0.93
DDX54-204ENST00000546898 TRIM35Q9UPQ4 493 aa20.84■□□□□ 0.93
DDX54-204ENST00000546898 GIGYF1O75420 1035 aaPredicted RBP20.83■□□□□ 0.93
DDX54-204ENST00000546898 TGFB2P61812 414 aa20.83■□□□□ 0.93
DDX54-204ENST00000546898 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
DDX54-204ENST00000546898 NFIXQ14938 502 aa20.82■□□□□ 0.92
DDX54-204ENST00000546898 UTRNP46939 3433 aa20.81■□□□□ 0.92
DDX54-204ENST00000546898 GRIN3BO60391 1043 aa20.81■□□□□ 0.92
DDX54-204ENST00000546898 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
DDX54-204ENST00000546898 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
DDX54-204ENST00000546898 TBC1D2BQ9UPU7 963 aa20.81■□□□□ 0.92
DDX54-204ENST00000546898 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
DDX54-204ENST00000546898 YBX3P16989 372 aaKnown RBP eCLIP20.8■□□□□ 0.92
DDX54-204ENST00000546898 MRS2Q9HD23 443 aa20.8■□□□□ 0.92
DDX54-204ENST00000546898 ERBB4Q15303 1308 aa20.79■□□□□ 0.92
DDX54-204ENST00000546898 ARFGEF1Q9Y6D6 1849 aa20.79■□□□□ 0.92
DDX54-204ENST00000546898 NBPF26B4DH59 902 aa20.79■□□□□ 0.92
DDX54-204ENST00000546898 APAF1O14727 1248 aa20.79■□□□□ 0.92
DDX54-204ENST00000546898 RGL2O15211 777 aa20.79■□□□□ 0.92
DDX54-204ENST00000546898 CAMTA2O94983 1202 aa20.79■□□□□ 0.92
DDX54-204ENST00000546898 PIP4K2AP48426 406 aaPredicted RBP20.79■□□□□ 0.92
DDX54-204ENST00000546898 NBPF10Q6P3W6 841 aaKnown RBP20.79■□□□□ 0.92
DDX54-204ENST00000546898 NBPF15Q8N660 670 aa20.79■□□□□ 0.92
DDX54-204ENST00000546898 CARMIL3Q8ND23 1372 aa20.78■□□□□ 0.92
DDX54-204ENST00000546898 CHL1O00533 1208 aa20.78■□□□□ 0.92
DDX54-204ENST00000546898 NUP98P52948 1817 aa20.77■□□□□ 0.92
DDX54-204ENST00000546898 SERPINB2P05120 415 aa20.77■□□□□ 0.92
DDX54-204ENST00000546898 ZNF652Q9Y2D9 606 aa20.77■□□□□ 0.92
DDX54-204ENST00000546898 ANKRD31Q8N7Z5 1873 aa20.77■□□□□ 0.92
DDX54-204ENST00000546898 GOLGB1Q14789 3259 aaKnown RBP20.76■□□□□ 0.91
DDX54-204ENST00000546898 CALD1Q05682 793 aaKnown RBP20.76■□□□□ 0.91
DDX54-204ENST00000546898 TBC1D9BQ66K14 1250 aa20.76■□□□□ 0.91
DDX54-204ENST00000546898 CLEC4GQ6UXB4 293 aa20.76■□□□□ 0.91
DDX54-204ENST00000546898 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
DDX54-204ENST00000546898 DPEP1P16444 411 aa20.74■□□□□ 0.91
DDX54-204ENST00000546898 BICDL1Q6ZP65 573 aa20.74■□□□□ 0.91
DDX54-204ENST00000546898 A0A0G2JLW4 131 aa20.73■□□□□ 0.91
DDX54-204ENST00000546898 SETDB2Q96T68 719 aa20.73■□□□□ 0.91
DDX54-204ENST00000546898 LAS1LQ9Y4W2 734 aaKnown RBP20.73■□□□□ 0.91
DDX54-204ENST00000546898 IFT57Q9NWB7 429 aa20.72■□□□□ 0.91
DDX54-204ENST00000546898 HOXB7P09629 217 aa20.71■□□□□ 0.91
DDX54-204ENST00000546898 ZNF853P0CG23 659 aa20.71■□□□□ 0.91
DDX54-204ENST00000546898 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
DDX54-204ENST00000546898 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
DDX54-204ENST00000546898 MYL6BP14649 208 aa20.7■□□□□ 0.9
DDX54-204ENST00000546898 KCNA3P22001 575 aa20.7■□□□□ 0.9
DDX54-204ENST00000546898 GNAI1P63096 354 aa20.7■□□□□ 0.9
DDX54-204ENST00000546898 CCDC27Q2M243 656 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms