RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
LTBR-215ENST00000546296 GNAI1P63096 354 aa21.92■■□□□ 1.1
LTBR-215ENST00000546296 SLC16A10Q8TF71 515 aa21.92■■□□□ 1.1
LTBR-215ENST00000546296 MTFR1LQ9H019 292 aa21.92■■□□□ 1.1
LTBR-215ENST00000546296 USP16Q9Y5T5 823 aa21.92■■□□□ 1.1
LTBR-215ENST00000546296 UBR2Q8IWV8 1755 aa21.92■■□□□ 1.1
LTBR-215ENST00000546296 NGEFQ8N5V2 710 aa21.91■■□□□ 1.1
LTBR-215ENST00000546296 IFT57Q9NWB7 429 aa21.91■■□□□ 1.1
LTBR-215ENST00000546296 TJP1Q07157 1748 aa21.9■■□□□ 1.1
LTBR-215ENST00000546296 GIGYF1O75420 1035 aaPredicted RBP21.9■■□□□ 1.1
LTBR-215ENST00000546296 ADRA2BP18089 450 aa21.9■■□□□ 1.1
LTBR-215ENST00000546296 RFC4P35249 363 aa21.9■■□□□ 1.1
LTBR-215ENST00000546296 ZBTB1Q9Y2K1 713 aa21.9■■□□□ 1.1
LTBR-215ENST00000546296 A1BGP04217 495 aa21.89■■□□□ 1.09
LTBR-215ENST00000546296 NPM2Q86SE8 214 aaKnown RBP21.89■■□□□ 1.09
LTBR-215ENST00000546296 ARHGEF1Q92888 912 aaKnown RBP21.89■■□□□ 1.09
LTBR-215ENST00000546296 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
LTBR-215ENST00000546296 MBIPQ9NS73 344 aa21.88■■□□□ 1.09
LTBR-215ENST00000546296 ZNF330Q9Y3S2 320 aaPredicted RBP21.88■■□□□ 1.09
LTBR-215ENST00000546296 COL5A3P25940 1745 aaPredicted RBP21.87■■□□□ 1.09
LTBR-215ENST00000546296 SOS1Q07889 1333 aaPredicted RBP21.86■■□□□ 1.09
LTBR-215ENST00000546296 MSL1Q68DK7 614 aa21.86■■□□□ 1.09
LTBR-215ENST00000546296 WDR63Q8IWG1 891 aa21.86■■□□□ 1.09
LTBR-215ENST00000546296 CICQ96RK0 1608 aaPredicted RBP21.86■■□□□ 1.09
LTBR-215ENST00000546296 CASZ1Q86V15 1759 aa21.86■■□□□ 1.09
LTBR-215ENST00000546296 KDM3BQ7LBC6 1761 aa21.85■■□□□ 1.09
LTBR-215ENST00000546296 ARXQ96QS3 562 aa21.85■■□□□ 1.09
LTBR-215ENST00000546296 PPP1R1BQ9UD71 204 aaPredicted RBP21.85■■□□□ 1.09
LTBR-215ENST00000546296 QSER1Q2KHR3 1735 aa21.85■■□□□ 1.09
LTBR-215ENST00000546296 IL16Q14005 1332 aa21.84■■□□□ 1.09
LTBR-215ENST00000546296 A0A087WZG4 1122 aa21.84■■□□□ 1.09
LTBR-215ENST00000546296 ZPR1O75312 459 aa21.84■■□□□ 1.09
LTBR-215ENST00000546296 EIF2S2P20042 333 aaKnown RBP21.84■■□□□ 1.09
LTBR-215ENST00000546296 POLD1P28340 1107 aa21.84■■□□□ 1.09
LTBR-215ENST00000546296 TUBGCP6Q96RT7 1819 aa21.84■■□□□ 1.09
LTBR-215ENST00000546296 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.09
LTBR-215ENST00000546296 IL6STP40189 918 aaPredicted RBP21.83■■□□□ 1.09
LTBR-215ENST00000546296 PIP4K2AP48426 406 aaPredicted RBP21.83■■□□□ 1.09
LTBR-215ENST00000546296 EIF5P55010 431 aaKnown RBP21.83■■□□□ 1.09
LTBR-215ENST00000546296 KRT24Q2M2I5 525 aa21.83■■□□□ 1.09
LTBR-215ENST00000546296 MYH14Q7Z406 1995 aaKnown RBP21.82■■□□□ 1.08
LTBR-215ENST00000546296 TSR2Q969E8 191 aaKnown RBP21.82■■□□□ 1.08
LTBR-215ENST00000546296 SRP68Q9UHB9 627 aaKnown RBP21.82■■□□□ 1.08
LTBR-215ENST00000546296 COL15A1P39059 1388 aa21.82■■□□□ 1.08
LTBR-215ENST00000546296 PTGER2P43116 358 aa21.81■■□□□ 1.08
LTBR-215ENST00000546296 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
LTBR-215ENST00000546296 NLGN1Q8N2Q7 840 aa21.8■■□□□ 1.08
LTBR-215ENST00000546296 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
LTBR-215ENST00000546296 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
LTBR-215ENST00000546296 NBPF26B4DH59 902 aa21.79■■□□□ 1.08
LTBR-215ENST00000546296 ELL2O00472 640 aaPredicted RBP21.79■■□□□ 1.08
LTBR-215ENST00000546296 USPL1Q5W0Q7 1092 aa21.79■■□□□ 1.08
LTBR-215ENST00000546296 NBPF10Q6P3W6 841 aaKnown RBP21.79■■□□□ 1.08
LTBR-215ENST00000546296 NBPF15Q8N660 670 aa21.79■■□□□ 1.08
LTBR-215ENST00000546296 NARFQ9UHQ1 456 aa21.79■■□□□ 1.08
LTBR-215ENST00000546296 TBC1D2BQ9UPU7 963 aa21.79■■□□□ 1.08
LTBR-215ENST00000546296 HOXB7P09629 217 aa21.78■■□□□ 1.08
LTBR-215ENST00000546296 GYS1P13807 737 aa21.78■■□□□ 1.08
LTBR-215ENST00000546296 MYL6BP14649 208 aa21.78■■□□□ 1.08
LTBR-215ENST00000546296 GOLGA2Q08379 1002 aa21.77■■□□□ 1.08
LTBR-215ENST00000546296 HDGFL1Q5TGJ6 251 aa21.77■■□□□ 1.08
LTBR-215ENST00000546296 C8orf58Q8NAV2 365 aa21.77■■□□□ 1.08
LTBR-215ENST00000546296 SGIP1Q9BQI5 828 aa21.77■■□□□ 1.08
LTBR-215ENST00000546296 MYH16Q9H6N6 1097 aa21.77■■□□□ 1.08
LTBR-215ENST00000546296 ERBB4Q15303 1308 aa21.77■■□□□ 1.07
LTBR-215ENST00000546296 DZIP3Q86Y13 1208 aaKnown RBP21.76■■□□□ 1.07
LTBR-215ENST00000546296 MMP10P09238 476 aa21.75■■□□□ 1.07
LTBR-215ENST00000546296 FKBP8Q14318 412 aa21.75■■□□□ 1.07
LTBR-215ENST00000546296 LRP5O75197 1615 aa21.75■■□□□ 1.07
LTBR-215ENST00000546296 SRCAPQ6ZRS2 3230 aa21.75■■□□□ 1.07
LTBR-215ENST00000546296 FANCIQ9NVI1 1328 aa21.75■■□□□ 1.07
LTBR-215ENST00000546296 CHMP4AQ9BY43 222 aa21.74■■□□□ 1.07
LTBR-215ENST00000546296 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
LTBR-215ENST00000546296 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
LTBR-215ENST00000546296 KLHL34Q8N239 644 aa21.73■■□□□ 1.07
LTBR-215ENST00000546296 ANXA1P04083 346 aa21.72■■□□□ 1.07
LTBR-215ENST00000546296 KIF6Q6ZMV9 814 aa21.72■■□□□ 1.07
LTBR-215ENST00000546296 TSPYL6Q8N831 410 aa21.72■■□□□ 1.07
LTBR-215ENST00000546296 PARP3Q9Y6F1 533 aa21.72■■□□□ 1.07
LTBR-215ENST00000546296 LAMB4A4D0S4 1761 aa21.71■■□□□ 1.07
LTBR-215ENST00000546296 CAMTA2O94983 1202 aa21.71■■□□□ 1.07
LTBR-215ENST00000546296 HNRNPUQ00839 825 aaKnown RBP eCLIP21.71■■□□□ 1.07
LTBR-215ENST00000546296 PDIA6Q15084 440 aa21.71■■□□□ 1.07
LTBR-215ENST00000546296 PROSER3Q2NL68 480 aa21.71■■□□□ 1.07
LTBR-215ENST00000546296 TWISTNBQ3B726 338 aaPredicted RBP21.71■■□□□ 1.07
LTBR-215ENST00000546296 DDX21Q9NR30 783 aaKnown RBP eCLIP21.71■■□□□ 1.07
LTBR-215ENST00000546296 CHPF2Q9P2E5 772 aa21.71■■□□□ 1.07
LTBR-215ENST00000546296 DBF4Q9UBU7 674 aaPredicted RBP21.71■■□□□ 1.07
LTBR-215ENST00000546296 E9PSI1 815 aa21.7■■□□□ 1.06
LTBR-215ENST00000546296 EXOSC9Q06265 439 aaKnown RBP21.7■■□□□ 1.06
LTBR-215ENST00000546296 BICDL1Q6ZP65 573 aa21.7■■□□□ 1.06
LTBR-215ENST00000546296 BCL2L12Q9HB09 334 aa21.7■■□□□ 1.06
LTBR-215ENST00000546296 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
LTBR-215ENST00000546296 ZNF652Q9Y2D9 606 aa21.69■■□□□ 1.06
LTBR-215ENST00000546296 C4AP0C0L4 1744 aa21.69■■□□□ 1.06
LTBR-215ENST00000546296 TM4SF1P30408 202 aa21.68■■□□□ 1.06
LTBR-215ENST00000546296 AIMP1Q12904 312 aaKnown RBP21.68■■□□□ 1.06
LTBR-215ENST00000546296 TTLL7Q6ZT98 887 aa21.68■■□□□ 1.06
LTBR-215ENST00000546296 FHDC1Q9C0D6 1143 aaPredicted RBP21.68■■□□□ 1.06
LTBR-215ENST00000546296 HYPKQ9NX55 129 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms