RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 DCAF5Q96JK2 942 aa10.12□□□□□ -0.79
LDHA-223ENST00000545215 ABCC6O95255 1503 aa10.12□□□□□ -0.79
LDHA-223ENST00000545215 PPLO60437 1756 aa10.12□□□□□ -0.79
LDHA-223ENST00000545215 ARFGEF1Q9Y6D6 1849 aa10.12□□□□□ -0.79
LDHA-223ENST00000545215 USP54Q70EL1 1684 aa10.12□□□□□ -0.79
LDHA-223ENST00000545215 LOC105371045A0A1W2PR82 267 aa10.11□□□□□ -0.79
LDHA-223ENST00000545215 DPEP1P16444 411 aa10.11□□□□□ -0.79
LDHA-223ENST00000545215 SAFB2Q14151 953 aaKnown RBP eCLIP10.11□□□□□ -0.79
LDHA-223ENST00000545215 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
LDHA-223ENST00000545215 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
LDHA-223ENST00000545215 MEGF6O75095 1541 aa10.11□□□□□ -0.79
LDHA-223ENST00000545215 ADGRF5Q8IZF2 1346 aa10.11□□□□□ -0.79
LDHA-223ENST00000545215 GRXCR2A6NFK2 248 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 POTEIP0CG38 1075 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 KCNA3P22001 575 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 ATN1P54259 1190 aaPredicted RBP10.1□□□□□ -0.79
LDHA-223ENST00000545215 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 MAP2K5Q13163 448 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 KANK4Q5T7N3 995 aaPredicted RBP10.1□□□□□ -0.79
LDHA-223ENST00000545215 PRAM1Q96QH2 718 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 OCEL1Q9H607 264 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 ERBB3P21860 1342 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 CASP8AP2Q9UKL3 1982 aa10.1□□□□□ -0.79
LDHA-223ENST00000545215 KDM6AO15550 1401 aaPredicted RBP10.1□□□□□ -0.79
LDHA-223ENST00000545215 BRCA1P38398 1863 aaKnown RBP10.1□□□□□ -0.79
LDHA-223ENST00000545215 THSD7BQ9C0I4 1608 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 ITGBL1O95965 494 aaPredicted RBP10.09□□□□□ -0.79
LDHA-223ENST00000545215 OSBPP22059 807 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 CLCN6P51797 869 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 IER5LQ5T953 404 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 NLRP13Q86W25 1043 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 FAM117AQ9C073 453 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 KAT6BQ8WYB5 2073 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
LDHA-223ENST00000545215 VPS8Q8N3P4 1428 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 LTBP1Q14766 1721 aa10.09□□□□□ -0.79
LDHA-223ENST00000545215 ZBTB7CA1YPR0 619 aa10.08□□□□□ -0.8
LDHA-223ENST00000545215 IRF6O14896 467 aa10.08□□□□□ -0.8
LDHA-223ENST00000545215 CA12O43570 354 aa10.08□□□□□ -0.8
LDHA-223ENST00000545215 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
LDHA-223ENST00000545215 PPIP5K1Q6PFW1 1433 aa10.08□□□□□ -0.8
LDHA-223ENST00000545215 HMGB2P26583 209 aaKnown RBP10.07□□□□□ -0.8
LDHA-223ENST00000545215 AMHR2Q16671 573 aa10.07□□□□□ -0.8
LDHA-223ENST00000545215 GPR101Q96P66 508 aaPredicted RBP10.07□□□□□ -0.8
LDHA-223ENST00000545215 CCDC7Q96M83 1385 aa10.07□□□□□ -0.8
LDHA-223ENST00000545215 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
LDHA-223ENST00000545215 ASTLQ6HA08 431 aaPredicted RBP10.07□□□□□ -0.8
LDHA-223ENST00000545215 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
LDHA-223ENST00000545215 PIM2Q9P1W9 311 aa10.07□□□□□ -0.8
LDHA-223ENST00000545215 ITSN1Q15811 1721 aa10.06□□□□□ -0.8
LDHA-223ENST00000545215 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
LDHA-223ENST00000545215 GNPATO15228 680 aa10.06□□□□□ -0.8
LDHA-223ENST00000545215 LMNB1P20700 586 aa10.06□□□□□ -0.8
LDHA-223ENST00000545215 DALRD3Q5D0E6 543 aaKnown RBP10.06□□□□□ -0.8
LDHA-223ENST00000545215 AMIGO3Q86WK7 504 aa10.06□□□□□ -0.8
LDHA-223ENST00000545215 ZMYND15Q9H091 742 aa10.06□□□□□ -0.8
LDHA-223ENST00000545215 SZT2Q5T011 3432 aa10.06□□□□□ -0.8
LDHA-223ENST00000545215 MMP10P09238 476 aa10.05□□□□□ -0.8
LDHA-223ENST00000545215 CSB-PGBD3P0DP91 1061 aa10.05□□□□□ -0.8
LDHA-223ENST00000545215 PRIM1P49642 420 aaKnown RBP10.05□□□□□ -0.8
LDHA-223ENST00000545215 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
LDHA-223ENST00000545215 COL6A3P12111 3177 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 G3V3G9 751 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 WASLO00401 505 aaPredicted RBP10.04□□□□□ -0.8
LDHA-223ENST00000545215 MAP2K2P36507 400 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 ECE1P42892 770 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 HIC1Q14526 733 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 LDHDQ86WU2 507 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 SYTL4Q96C24 671 aaPredicted RBP10.04□□□□□ -0.8
LDHA-223ENST00000545215 DDRGK1Q96HY6 314 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 POGKQ9P215 609 aa10.04□□□□□ -0.8
LDHA-223ENST00000545215 NSD2O96028 1365 aa10.03□□□□□ -0.8
LDHA-223ENST00000545215 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
LDHA-223ENST00000545215 RASSF7Q02833 373 aa10.03□□□□□ -0.8
LDHA-223ENST00000545215 ABT1Q9ULW3 272 aaKnown RBP10.03□□□□□ -0.8
LDHA-223ENST00000545215 POLR3AO14802 1390 aaPredicted RBP10.02□□□□□ -0.81
LDHA-223ENST00000545215 ANKRD36BQ8N2N9 1353 aa10.02□□□□□ -0.81
LDHA-223ENST00000545215 C5P01031 1676 aa10.02□□□□□ -0.81
LDHA-223ENST00000545215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.02□□□□□ -0.81
LDHA-223ENST00000545215 IL2RBP14784 551 aa10.02□□□□□ -0.81
LDHA-223ENST00000545215 FECHP22830 423 aa10.02□□□□□ -0.81
LDHA-223ENST00000545215 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
LDHA-223ENST00000545215 COLQQ9Y215 455 aaPredicted RBP10.02□□□□□ -0.81
LDHA-223ENST00000545215 ACEP12821 1306 aa10.01□□□□□ -0.81
LDHA-223ENST00000545215 DDX12PQ92771 950 aa10.01□□□□□ -0.81
LDHA-223ENST00000545215 L3MBTL3Q96JM7 780 aaPredicted RBP10.01□□□□□ -0.81
LDHA-223ENST00000545215 PHF14O94880 888 aa10□□□□□ -0.81
LDHA-223ENST00000545215 PLCG2P16885 1265 aa10□□□□□ -0.81
LDHA-223ENST00000545215 EVX2Q03828 476 aa10□□□□□ -0.81
LDHA-223ENST00000545215 CYP4F22Q6NT55 531 aa10□□□□□ -0.81
LDHA-223ENST00000545215 NUDT16Q96DE0 195 aaKnown RBP10□□□□□ -0.81
LDHA-223ENST00000545215 RSPH6AQ9H0K4 717 aa10□□□□□ -0.81
LDHA-223ENST00000545215 PRDM6Q9NQX0 595 aa10□□□□□ -0.81
LDHA-223ENST00000545215 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
LDHA-223ENST00000545215 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
LDHA-223ENST00000545215 SSFA2P28290 1259 aa9.99□□□□□ -0.81
LDHA-223ENST00000545215 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms