RNA–Protein interactions for RNA: ENST00000544868.2

MALAT1-203, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-203ENST00000544868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
MALAT1-203ENST00000544868 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
MALAT1-203ENST00000544868 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
MALAT1-203ENST00000544868 ECE1P42892 770 aa12.03□□□□□ -0.48
MALAT1-203ENST00000544868 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
MALAT1-203ENST00000544868 LDHDQ86WU2 507 aa12.03□□□□□ -0.48
MALAT1-203ENST00000544868 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
MALAT1-203ENST00000544868 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
MALAT1-203ENST00000544868 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
MALAT1-203ENST00000544868 AK7Q96M32 723 aa12.02□□□□□ -0.49
MALAT1-203ENST00000544868 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
MALAT1-203ENST00000544868 USP47Q96K76 1375 aa12.02□□□□□ -0.49
MALAT1-203ENST00000544868 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.49
MALAT1-203ENST00000544868 IL2RBP14784 551 aa12.01□□□□□ -0.49
MALAT1-203ENST00000544868 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
MALAT1-203ENST00000544868 EFCAB3Q8N7B9 438 aa12.01□□□□□ -0.49
MALAT1-203ENST00000544868 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
MALAT1-203ENST00000544868 SOX12O15370 315 aa12□□□□□ -0.49
MALAT1-203ENST00000544868 IER5LQ5T953 404 aa12□□□□□ -0.49
MALAT1-203ENST00000544868 CYP4F22Q6NT55 531 aa12□□□□□ -0.49
MALAT1-203ENST00000544868 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
MALAT1-203ENST00000544868 ACEP12821 1306 aa12□□□□□ -0.49
MALAT1-203ENST00000544868 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
MALAT1-203ENST00000544868 MAP2K2P36507 400 aa11.98□□□□□ -0.49
MALAT1-203ENST00000544868 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
MALAT1-203ENST00000544868 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
MALAT1-203ENST00000544868 COLQQ9Y215 455 aaPredicted RBP11.98□□□□□ -0.49
MALAT1-203ENST00000544868 CEP290O15078 2479 aa11.97□□□□□ -0.49
MALAT1-203ENST00000544868 AOC2O75106 756 aa11.97□□□□□ -0.49
MALAT1-203ENST00000544868 SSFA2P28290 1259 aa11.97□□□□□ -0.49
MALAT1-203ENST00000544868 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
MALAT1-203ENST00000544868 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
MALAT1-203ENST00000544868 C4AP0C0L4 1744 aa11.96□□□□□ -0.49
MALAT1-203ENST00000544868 C7P10643 843 aa11.95□□□□□ -0.5
MALAT1-203ENST00000544868 MKI67P46013 3256 aaKnown RBP11.94□□□□□ -0.5
MALAT1-203ENST00000544868 FAM50AQ14320 339 aaKnown RBP11.94□□□□□ -0.5
MALAT1-203ENST00000544868 IQCA1LA6NCM1 817 aa11.93□□□□□ -0.5
MALAT1-203ENST00000544868 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
MALAT1-203ENST00000544868 NLRP6P59044 892 aa11.93□□□□□ -0.5
MALAT1-203ENST00000544868 ARHGEF25Q86VW2 580 aa11.93□□□□□ -0.5
MALAT1-203ENST00000544868 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
MALAT1-203ENST00000544868 PRDM6Q9NQX0 595 aa11.93□□□□□ -0.5
MALAT1-203ENST00000544868 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
MALAT1-203ENST00000544868 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
MALAT1-203ENST00000544868 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
MALAT1-203ENST00000544868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5not detected■■□□□ 12.3
MALAT1-203ENST00000544868 SCN4AP35499 1836 aa11.92□□□□□ -0.5
MALAT1-203ENST00000544868 ROCK1Q13464 1354 aa11.92□□□□□ -0.5
MALAT1-203ENST00000544868 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
MALAT1-203ENST00000544868 SEC24BO95487 1268 aa11.91□□□□□ -0.5
MALAT1-203ENST00000544868 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
MALAT1-203ENST00000544868 CNTROBQ8N137 903 aa11.91□□□□□ -0.5
MALAT1-203ENST00000544868 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
MALAT1-203ENST00000544868 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
MALAT1-203ENST00000544868 ADAMTSL1Q8N6G6 1762 aa11.91□□□□□ -0.5
MALAT1-203ENST00000544868 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
MALAT1-203ENST00000544868 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.5
MALAT1-203ENST00000544868 CHRNA5P30532 468 aa11.9□□□□□ -0.5
MALAT1-203ENST00000544868 RGL3Q3MIN7 710 aa11.9□□□□□ -0.5
MALAT1-203ENST00000544868 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
MALAT1-203ENST00000544868 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
MALAT1-203ENST00000544868 PLCG2P16885 1265 aa11.89□□□□□ -0.51
MALAT1-203ENST00000544868 COL9A1P20849 921 aa11.89□□□□□ -0.51
MALAT1-203ENST00000544868 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
MALAT1-203ENST00000544868 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
MALAT1-203ENST00000544868 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
MALAT1-203ENST00000544868 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
MALAT1-203ENST00000544868 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
MALAT1-203ENST00000544868 PARP3Q9Y6F1 533 aa11.89□□□□□ -0.51
MALAT1-203ENST00000544868 UNC80Q8N2C7 3258 aa11.89□□□□□ -0.51
MALAT1-203ENST00000544868 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
MALAT1-203ENST00000544868 ERFEQ4G0M1 354 aa11.88□□□□□ -0.51
MALAT1-203ENST00000544868 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
MALAT1-203ENST00000544868 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
MALAT1-203ENST00000544868 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
MALAT1-203ENST00000544868 NFKBIEO00221 500 aa11.87□□□□□ -0.51
MALAT1-203ENST00000544868 PLA2G5P39877 138 aa11.87□□□□□ -0.51
MALAT1-203ENST00000544868 TMF1P82094 1093 aa11.87□□□□□ -0.51
MALAT1-203ENST00000544868 GNPATO15228 680 aa11.86□□□□□ -0.51
MALAT1-203ENST00000544868 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
MALAT1-203ENST00000544868 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
MALAT1-203ENST00000544868 TLL2Q9Y6L7 1015 aa11.86□□□□□ -0.51
MALAT1-203ENST00000544868 NBPF1Q3BBV0 1214 aa11.85□□□□□ -0.51
MALAT1-203ENST00000544868 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
MALAT1-203ENST00000544868 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
MALAT1-203ENST00000544868 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
MALAT1-203ENST00000544868 SNX27Q96L92 541 aa11.84□□□□□ -0.51
MALAT1-203ENST00000544868 VCANP13611 3396 aa11.84□□□□□ -0.51
MALAT1-203ENST00000544868 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
MALAT1-203ENST00000544868 RANBP2P49792 3224 aaKnown RBP11.82□□□□□ -0.52
MALAT1-203ENST00000544868 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
MALAT1-203ENST00000544868 LINC00116Q8NCU8 138 aa11.82□□□□□ -0.52
MALAT1-203ENST00000544868 FAM122AQ96E09 287 aa11.82□□□□□ -0.52
MALAT1-203ENST00000544868 ADGRB1O14514 1584 aa11.81□□□□□ -0.52
MALAT1-203ENST00000544868 FMR1Q06787 632 aaKnown RBP eCLIP11.81□□□□□ -0.52
MALAT1-203ENST00000544868 CDK19Q9BWU1 502 aa11.81□□□□□ -0.52
MALAT1-203ENST00000544868 NFAT5O94916 1531 aa11.81□□□□□ -0.52
MALAT1-203ENST00000544868 EPHX2P34913 555 aa11.8□□□□□ -0.52
MALAT1-203ENST00000544868 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
MALAT1-203ENST00000544868 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms