RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 CHMLP26374 656 aa21.7■■□□□ 1.06
SCARB1-208ENST00000544327 XPCQ01831 940 aaPredicted RBP21.7■■□□□ 1.06
SCARB1-208ENST00000544327 PI4KAP1Q8N8J0 262 aa21.7■■□□□ 1.06
SCARB1-208ENST00000544327 ISY1Q9ULR0 285 aaKnown RBP21.7■■□□□ 1.06
SCARB1-208ENST00000544327 GOLGA6L3A6NEY3 463 aa21.69■■□□□ 1.06
SCARB1-208ENST00000544327 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
SCARB1-208ENST00000544327 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
SCARB1-208ENST00000544327 DCCP43146 1447 aa21.69■■□□□ 1.06
SCARB1-208ENST00000544327 ANAPC15P60006 121 aa21.69■■□□□ 1.06
SCARB1-208ENST00000544327 MTX1Q13505 466 aa21.69■■□□□ 1.06
SCARB1-208ENST00000544327 FOXD4L1Q9NU39 408 aa21.69■■□□□ 1.06
SCARB1-208ENST00000544327 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
SCARB1-208ENST00000544327 ERBB3P21860 1342 aa21.68■■□□□ 1.06
SCARB1-208ENST00000544327 CYP2E1P05181 493 aaPredicted RBP21.68■■□□□ 1.06
SCARB1-208ENST00000544327 NUCB2P80303 420 aa21.68■■□□□ 1.06
SCARB1-208ENST00000544327 TSHZ3Q63HK5 1081 aa21.68■■□□□ 1.06
SCARB1-208ENST00000544327 KIF1BPQ96EK5 621 aa21.68■■□□□ 1.06
SCARB1-208ENST00000544327 CRYBG1Q9Y4K1 1723 aa21.68■■□□□ 1.06
SCARB1-208ENST00000544327 NBPF7P0C2Y1 421 aaPredicted RBP21.67■■□□□ 1.06
SCARB1-208ENST00000544327 HSP90AB4PQ58FF6 505 aa21.67■■□□□ 1.06
SCARB1-208ENST00000544327 RHPN1Q8TCX5 695 aa21.67■■□□□ 1.06
SCARB1-208ENST00000544327 SURF6O75683 361 aaKnown RBP21.66■■□□□ 1.06
SCARB1-208ENST00000544327 MCCP23508 829 aa21.66■■□□□ 1.06
SCARB1-208ENST00000544327 SSFA2P28290 1259 aa21.66■■□□□ 1.06
SCARB1-208ENST00000544327 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
SCARB1-208ENST00000544327 USP42Q9H9J4 1324 aaKnown RBP21.66■■□□□ 1.06
SCARB1-208ENST00000544327 COL18A1P39060 1754 aa21.66■■□□□ 1.06
SCARB1-208ENST00000544327 SRGAP3O43295 1099 aa21.66■■□□□ 1.06
SCARB1-208ENST00000544327 MCM2P49736 904 aa21.66■■□□□ 1.06
SCARB1-208ENST00000544327 HDAC5Q9UQL6 1122 aa21.66■■□□□ 1.06
SCARB1-208ENST00000544327 KSR2Q6VAB6 950 aa21.65■■□□□ 1.06
SCARB1-208ENST00000544327 AK9Q5TCS8 1911 aa21.65■■□□□ 1.06
SCARB1-208ENST00000544327 TRIM6-TRIM34B2RNG4 842 aa21.64■■□□□ 1.06
SCARB1-208ENST00000544327 LMOD2Q6P5Q4 547 aa21.64■■□□□ 1.06
SCARB1-208ENST00000544327 HYPKQ9NX55 129 aa21.64■■□□□ 1.06
SCARB1-208ENST00000544327 PI4K2BQ8TCG2 481 aa21.64■■□□□ 1.05
SCARB1-208ENST00000544327 RILPL2Q969X0 211 aa21.64■■□□□ 1.05
SCARB1-208ENST00000544327 BAG4O95429 457 aaKnown RBP21.63■■□□□ 1.05
SCARB1-208ENST00000544327 GZF1Q9H116 711 aaPredicted RBP21.63■■□□□ 1.05
SCARB1-208ENST00000544327 IL1RAPL2Q9NP60 686 aa21.63■■□□□ 1.05
SCARB1-208ENST00000544327 GOLGA6L22H0YM25 854 aa21.62■■□□□ 1.05
SCARB1-208ENST00000544327 UNC5CLQ8IV45 518 aa21.62■■□□□ 1.05
SCARB1-208ENST00000544327 ANXA1P04083 346 aa21.62■■□□□ 1.05
SCARB1-208ENST00000544327 XRCC6P12956 609 aaKnown RBP eCLIP21.62■■□□□ 1.05
SCARB1-208ENST00000544327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.62■■□□□ 1.05
SCARB1-208ENST00000544327 MAP3K2Q9Y2U5 619 aa21.62■■□□□ 1.05
SCARB1-208ENST00000544327 UTYO14607 1347 aa21.61■■□□□ 1.05
SCARB1-208ENST00000544327 MRE11P49959 708 aa21.61■■□□□ 1.05
SCARB1-208ENST00000544327 NUTM1Q86Y26 1132 aa21.61■■□□□ 1.05
SCARB1-208ENST00000544327 DDX21Q9NR30 783 aaKnown RBP eCLIP21.61■■□□□ 1.05
SCARB1-208ENST00000544327 TTC41PQ6P2S7 1318 aa21.61■■□□□ 1.05
SCARB1-208ENST00000544327 PROSER3Q2NL68 480 aa21.6■■□□□ 1.05
SCARB1-208ENST00000544327 MRC1P22897 1456 aa21.6■■□□□ 1.05
SCARB1-208ENST00000544327 STRCP1A6NGW2 1772 aa21.6■■□□□ 1.05
SCARB1-208ENST00000544327 KDM6AO15550 1401 aaPredicted RBP21.6■■□□□ 1.05
SCARB1-208ENST00000544327 C5P01031 1676 aa21.59■■□□□ 1.05
SCARB1-208ENST00000544327 ANO2Q9NQ90 1003 aa21.59■■□□□ 1.05
SCARB1-208ENST00000544327 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.05
SCARB1-208ENST00000544327 ATF3P18847 181 aa21.58■■□□□ 1.05
SCARB1-208ENST00000544327 CUL4AQ13619 759 aa21.58■■□□□ 1.05
SCARB1-208ENST00000544327 LINS1Q8NG48 757 aa21.58■■□□□ 1.05
SCARB1-208ENST00000544327 NPHP3Q7Z494 1330 aa21.58■■□□□ 1.05
SCARB1-208ENST00000544327 PKD1L3Q7Z443 1732 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 NEK4P51957 841 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 PDIA6Q15084 440 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 RAPGEF4Q8WZA2 1011 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 PALD1Q9ULE6 856 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 TMEM94Q12767 1356 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 KLHL40Q2TBA0 621 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 ERC1Q8IUD2 1116 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 CNTROBQ8N137 903 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
SCARB1-208ENST00000544327 C9orf78Q9NZ63 289 aaPredicted RBP21.57■■□□□ 1.04
SCARB1-208ENST00000544327 PHKG2P15735 406 aa21.56■■□□□ 1.04
SCARB1-208ENST00000544327 TATP17735 454 aaPredicted RBP21.56■■□□□ 1.04
SCARB1-208ENST00000544327 HSPA4P34932 840 aa21.56■■□□□ 1.04
SCARB1-208ENST00000544327 ZC3H6P61129 1189 aaKnown RBP21.56■■□□□ 1.04
SCARB1-208ENST00000544327 FAM43AQ8N2R8 423 aa21.56■■□□□ 1.04
SCARB1-208ENST00000544327 ZGPATQ8N5A5 531 aaKnown RBP21.56■■□□□ 1.04
SCARB1-208ENST00000544327 SPG7Q9UQ90 795 aa21.56■■□□□ 1.04
SCARB1-208ENST00000544327 TNS3Q68CZ2 1445 aa21.56■■□□□ 1.04
SCARB1-208ENST00000544327 MEGF6O75095 1541 aa21.56■■□□□ 1.04
SCARB1-208ENST00000544327 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
SCARB1-208ENST00000544327 SGSM2O43147 1006 aa21.55■■□□□ 1.04
SCARB1-208ENST00000544327 GLRX3O76003 335 aaKnown RBP21.55■■□□□ 1.04
SCARB1-208ENST00000544327 ZNF790Q6PG37 636 aa21.55■■□□□ 1.04
SCARB1-208ENST00000544327 TMX3Q96JJ7 454 aa21.55■■□□□ 1.04
SCARB1-208ENST00000544327 INTS4Q96HW7 963 aaKnown RBP21.55■■□□□ 1.04
SCARB1-208ENST00000544327 RAD50Q92878 1312 aa21.54■■□□□ 1.04
SCARB1-208ENST00000544327 GRM8O00222 908 aa21.54■■□□□ 1.04
SCARB1-208ENST00000544327 GRPEL1Q9HAV7 217 aa21.54■■□□□ 1.04
SCARB1-208ENST00000544327 PLEKHG5O94827 1062 aa21.53■■□□□ 1.04
SCARB1-208ENST00000544327 CLASRPQ8N2M8 674 aaKnown RBP21.53■■□□□ 1.04
SCARB1-208ENST00000544327 PARP4Q9UKK3 1724 aaKnown RBP21.53■■□□□ 1.04
SCARB1-208ENST00000544327 CPDO75976 1380 aa21.53■■□□□ 1.04
SCARB1-208ENST00000544327 IL25Q9H293 177 aa21.52■■□□□ 1.04
SCARB1-208ENST00000544327 NLRP2Q9NX02 1062 aa21.52■■□□□ 1.04
SCARB1-208ENST00000544327 ZDHHC9Q9Y397 364 aa21.52■■□□□ 1.04
SCARB1-208ENST00000544327 PKP1Q13835 747 aa21.52■■□□□ 1.04
SCARB1-208ENST00000544327 CWF19L2Q2TBE0 894 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms