RNA–Protein interactions for RNA: ENST00000543254.1

KLHL42-204, Transcript of kelch like family member 42, humanhuman

TSL 2

Gene KLHL42, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-204ENST00000543254 CHL1O00533 1208 aa16.36■□□□□ 0.21
KLHL42-204ENST00000543254 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
KLHL42-204ENST00000543254 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
KLHL42-204ENST00000543254 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
KLHL42-204ENST00000543254 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
KLHL42-204ENST00000543254 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
KLHL42-204ENST00000543254 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
KLHL42-204ENST00000543254 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
KLHL42-204ENST00000543254 ARXQ96QS3 562 aa16.35■□□□□ 0.21
KLHL42-204ENST00000543254 ZBTB1Q9Y2K1 713 aa16.35■□□□□ 0.21
KLHL42-204ENST00000543254 USP16Q9Y5T5 823 aa16.35■□□□□ 0.21
KLHL42-204ENST00000543254 DLG5Q8TDM6 1919 aa16.35■□□□□ 0.21
KLHL42-204ENST00000543254 ZNF831Q5JPB2 1677 aa16.34■□□□□ 0.21
KLHL42-204ENST00000543254 A0A087WZG4 1122 aa16.34■□□□□ 0.21
KLHL42-204ENST00000543254 PRAMEF22A3QJZ6 481 aa16.34■□□□□ 0.21
KLHL42-204ENST00000543254 ZPR1O75312 459 aa16.34■□□□□ 0.21
KLHL42-204ENST00000543254 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
KLHL42-204ENST00000543254 A1BGP04217 495 aa16.34■□□□□ 0.21
KLHL42-204ENST00000543254 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
KLHL42-204ENST00000543254 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.21
KLHL42-204ENST00000543254 MBIPQ9NS73 344 aa16.33■□□□□ 0.2
KLHL42-204ENST00000543254 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
KLHL42-204ENST00000543254 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
KLHL42-204ENST00000543254 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
KLHL42-204ENST00000543254 TAF1LQ8IZX4 1826 aa16.32■□□□□ 0.2
KLHL42-204ENST00000543254 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
KLHL42-204ENST00000543254 TJP1Q07157 1748 aa16.31■□□□□ 0.2
KLHL42-204ENST00000543254 COL15A1P39059 1388 aa16.31■□□□□ 0.2
KLHL42-204ENST00000543254 WDR63Q8IWG1 891 aa16.31■□□□□ 0.2
KLHL42-204ENST00000543254 IL16Q14005 1332 aa16.3■□□□□ 0.2
KLHL42-204ENST00000543254 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
KLHL42-204ENST00000543254 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
KLHL42-204ENST00000543254 NLGN1Q8N2Q7 840 aa16.3■□□□□ 0.2
KLHL42-204ENST00000543254 CASZ1Q86V15 1759 aa16.29■□□□□ 0.2
KLHL42-204ENST00000543254 PTGER2P43116 358 aa16.29■□□□□ 0.2
KLHL42-204ENST00000543254 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
KLHL42-204ENST00000543254 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
KLHL42-204ENST00000543254 SRP68Q9UHB9 627 aaKnown RBP16.29■□□□□ 0.2
KLHL42-204ENST00000543254 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
KLHL42-204ENST00000543254 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
KLHL42-204ENST00000543254 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
KLHL42-204ENST00000543254 MYL6BP14649 208 aa16.28■□□□□ 0.2
KLHL42-204ENST00000543254 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
KLHL42-204ENST00000543254 USPL1Q5W0Q7 1092 aa16.28■□□□□ 0.2
KLHL42-204ENST00000543254 NECTIN2Q92692 538 aa16.28■□□□□ 0.2
KLHL42-204ENST00000543254 CHMP4AQ9BY43 222 aa16.28■□□□□ 0.2
KLHL42-204ENST00000543254 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
KLHL42-204ENST00000543254 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
KLHL42-204ENST00000543254 ERBB4Q15303 1308 aa16.27■□□□□ 0.2
KLHL42-204ENST00000543254 HOXB7P09629 217 aa16.27■□□□□ 0.2
KLHL42-204ENST00000543254 GYS1P13807 737 aa16.27■□□□□ 0.2
KLHL42-204ENST00000543254 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
KLHL42-204ENST00000543254 HDGFL1Q5TGJ6 251 aa16.27■□□□□ 0.2
KLHL42-204ENST00000543254 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
KLHL42-204ENST00000543254 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
KLHL42-204ENST00000543254 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
KLHL42-204ENST00000543254 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.19
KLHL42-204ENST00000543254 KDM3BQ7LBC6 1761 aa16.26■□□□□ 0.19
KLHL42-204ENST00000543254 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
KLHL42-204ENST00000543254 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
KLHL42-204ENST00000543254 MMP10P09238 476 aa16.26■□□□□ 0.19
KLHL42-204ENST00000543254 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
KLHL42-204ENST00000543254 UBR3Q6ZT12 1888 aa16.26■□□□□ 0.19
KLHL42-204ENST00000543254 TUBGCP6Q96RT7 1819 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
KLHL42-204ENST00000543254 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 ZNF652Q9Y2D9 606 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 PARP3Q9Y6F1 533 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 LRP5O75197 1615 aa16.25■□□□□ 0.19
KLHL42-204ENST00000543254 FKBP8Q14318 412 aa16.24■□□□□ 0.19
KLHL42-204ENST00000543254 MYH14Q7Z406 1995 aaKnown RBP16.24■□□□□ 0.19
KLHL42-204ENST00000543254 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
KLHL42-204ENST00000543254 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
KLHL42-204ENST00000543254 NPHP1O15259 732 aa16.22■□□□□ 0.19
KLHL42-204ENST00000543254 BICDL1Q6ZP65 573 aa16.22■□□□□ 0.19
KLHL42-204ENST00000543254 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
KLHL42-204ENST00000543254 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
KLHL42-204ENST00000543254 DBF4Q9UBU7 674 aaPredicted RBP16.22■□□□□ 0.19
KLHL42-204ENST00000543254 E9PSI1 815 aa16.21■□□□□ 0.19
KLHL42-204ENST00000543254 CAMTA2O94983 1202 aa16.21■□□□□ 0.19
KLHL42-204ENST00000543254 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
KLHL42-204ENST00000543254 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
KLHL42-204ENST00000543254 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
KLHL42-204ENST00000543254 ANXA1P04083 346 aa16.2■□□□□ 0.18
KLHL42-204ENST00000543254 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
KLHL42-204ENST00000543254 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
KLHL42-204ENST00000543254 STK31Q9BXU1 1019 aa16.2■□□□□ 0.18
KLHL42-204ENST00000543254 HYPKQ9NX55 129 aa16.2■□□□□ 0.18
KLHL42-204ENST00000543254 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 NFIXQ14938 502 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 PDIA6Q15084 440 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 PROSER3Q2NL68 480 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
KLHL42-204ENST00000543254 ZBTB3Q9H5J0 574 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms