RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 POLRMTO00411 1230 aaKnown RBP15.18■□□□□ 0.02
VTN-203ENST00000542029 DDR1Q08345 913 aa15.18■□□□□ 0.02
VTN-203ENST00000542029 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
VTN-203ENST00000542029 PIM2Q9P1W9 311 aa15.18■□□□□ 0.02
VTN-203ENST00000542029 COL15A1P39059 1388 aa15.18■□□□□ 0.02
VTN-203ENST00000542029 HEG1Q9ULI3 1381 aa15.18■□□□□ 0.02
VTN-203ENST00000542029 SCN11AQ9UI33 1791 aa15.17■□□□□ 0.02
VTN-203ENST00000542029 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
VTN-203ENST00000542029 CANXP27824 592 aaKnown RBP15.17■□□□□ 0.02
VTN-203ENST00000542029 EIF5P55010 431 aaKnown RBP15.17■□□□□ 0.02
VTN-203ENST00000542029 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
VTN-203ENST00000542029 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
VTN-203ENST00000542029 ATP10DQ9P241 1426 aa15.17■□□□□ 0.02
VTN-203ENST00000542029 COL5A3P25940 1745 aaPredicted RBP15.16■□□□□ 0.02
VTN-203ENST00000542029 ADCY9O60503 1353 aa15.15■□□□□ 0.02
VTN-203ENST00000542029 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
VTN-203ENST00000542029 NFIXQ14938 502 aa15.15■□□□□ 0.02
VTN-203ENST00000542029 DALRD3Q5D0E6 543 aaKnown RBP15.15■□□□□ 0.02
VTN-203ENST00000542029 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
VTN-203ENST00000542029 ADAMTS7Q9UKP4 1686 aa15.15■□□□□ 0.02
VTN-203ENST00000542029 MYH14Q7Z406 1995 aaKnown RBP15.15■□□□□ 0.02
VTN-203ENST00000542029 KCNA3P22001 575 aa15.14■□□□□ 0.01
VTN-203ENST00000542029 ARHGAP27Q6ZUM4 889 aa15.14■□□□□ 0.01
VTN-203ENST00000542029 SERPINB2P05120 415 aa15.13■□□□□ 0.01
VTN-203ENST00000542029 BCL2L12Q9HB09 334 aa15.13■□□□□ 0.01
VTN-203ENST00000542029 C4AP0C0L4 1744 aa15.12■□□□□ 0.01
VTN-203ENST00000542029 SENP3-EIF4A1A0A087X0R7 540 aa15.12■□□□□ 0.01
VTN-203ENST00000542029 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
VTN-203ENST00000542029 PDZRN3Q9UPQ7 1066 aa15.12■□□□□ 0.01
VTN-203ENST00000542029 TJP1Q07157 1748 aa15.12■□□□□ 0.01
VTN-203ENST00000542029 RALBP1Q15311 655 aa15.11■□□□□ 0.01
VTN-203ENST00000542029 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
VTN-203ENST00000542029 MCM10Q7L590 875 aa15.11■□□□□ 0.01
VTN-203ENST00000542029 PNISRQ8TF01 805 aaKnown RBP15.11■□□□□ 0.01
VTN-203ENST00000542029 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
VTN-203ENST00000542029 KCNQ3O43525 872 aa15.1■□□□□ 0.01
VTN-203ENST00000542029 A1BGP04217 495 aa15.1■□□□□ 0.01
VTN-203ENST00000542029 CHRNA5P30532 468 aa15.1■□□□□ 0.01
VTN-203ENST00000542029 RGL2O15211 777 aa15.09■□□□□ 0.01
VTN-203ENST00000542029 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
VTN-203ENST00000542029 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
VTN-203ENST00000542029 TBC1D2BQ9UPU7 963 aa15.09■□□□□ 0.01
VTN-203ENST00000542029 H0YIN7 160 aa15.08■□□□□ 0
VTN-203ENST00000542029 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
VTN-203ENST00000542029 TTLL6Q8N841 843 aa15.08■□□□□ 0
VTN-203ENST00000542029 SETDB2Q96T68 719 aa15.08■□□□□ 0
VTN-203ENST00000542029 USP16Q9Y5T5 823 aa15.08■□□□□ 0
VTN-203ENST00000542029 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
VTN-203ENST00000542029 CAMTA2O94983 1202 aa15.07■□□□□ 0
VTN-203ENST00000542029 PDE6BP35913 854 aa15.07■□□□□ 0
VTN-203ENST00000542029 DCTN1Q14203 1278 aa15.07■□□□□ 0
VTN-203ENST00000542029 C9orf131Q5VYM1 1079 aa15.07■□□□□ 0
VTN-203ENST00000542029 TBC1D9BQ66K14 1250 aa15.07■□□□□ 0
VTN-203ENST00000542029 DZIP3Q86Y13 1208 aaKnown RBP15.07■□□□□ 0
VTN-203ENST00000542029 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
VTN-203ENST00000542029 ZNF652Q9Y2D9 606 aa15.07■□□□□ 0
VTN-203ENST00000542029 KIF13BQ9NQT8 1826 aa15.07■□□□□ 0
VTN-203ENST00000542029 CARMIL3Q8ND23 1372 aa15.07■□□□□ 0
VTN-203ENST00000542029 NPHP1O15259 732 aa15.06■□□□□ 0
VTN-203ENST00000542029 NFE2L2Q16236 605 aa15.06■□□□□ 0
VTN-203ENST00000542029 C2CD5Q86YS7 1000 aa15.06■□□□□ 0
VTN-203ENST00000542029 PLEKHF1Q96S99 279 aa15.06■□□□□ 0
VTN-203ENST00000542029 ZC3H4Q9UPT8 1303 aaKnown RBP15.04■□□□□ -0
VTN-203ENST00000542029 KIF3CO14782 793 aa15.04■□□□□ -0
VTN-203ENST00000542029 ST5P78524 1137 aa15.04■□□□□ -0
VTN-203ENST00000542029 PRR5LQ6MZQ0 368 aa15.04■□□□□ -0
VTN-203ENST00000542029 CNBD1Q8NA66 436 aa15.04■□□□□ -0
VTN-203ENST00000542029 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
VTN-203ENST00000542029 RNF181Q9P0P0 153 aa15.03■□□□□ -0
VTN-203ENST00000542029 KDM2BQ8NHM5 1336 aa15.02■□□□□ -0
VTN-203ENST00000542029 PRAMEF22A3QJZ6 481 aa15.02■□□□□ -0
VTN-203ENST00000542029 TOMM70O94826 608 aa15.02■□□□□ -0
VTN-203ENST00000542029 LMOD3Q0VAK6 560 aa15.02■□□□□ -0
VTN-203ENST00000542029 DDX10Q13206 875 aaKnown RBP15.02■□□□□ -0
VTN-203ENST00000542029 KIAA1551Q9HCM1 1747 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 HSPA6P17066 643 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 LMNB1P20700 586 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 NBPF10Q6P3W6 841 aaKnown RBP15.01□□□□□ -0.01
VTN-203ENST00000542029 NBPF5PQ86XG9 351 aaPredicted RBP15.01□□□□□ -0.01
VTN-203ENST00000542029 NBPF15Q8N660 670 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 CNKSR1Q969H4 720 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 ZNF622Q969S3 477 aaKnown RBP eCLIP15.01□□□□□ -0.01
VTN-203ENST00000542029 BABAM1Q9NWV8 329 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 MIS18AQ9NYP9 233 aa15.01□□□□□ -0.01
VTN-203ENST00000542029 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
VTN-203ENST00000542029 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
VTN-203ENST00000542029 EIF4A1P60842 406 aaKnown RBP15□□□□□ -0.01
VTN-203ENST00000542029 TPTE2Q6XPS3 522 aa15□□□□□ -0.01
VTN-203ENST00000542029 N4BP2Q86UW6 1770 aaPredicted RBP14.99□□□□□ -0.01
VTN-203ENST00000542029 RIPK4P57078 832 aa14.99□□□□□ -0.01
VTN-203ENST00000542029 SOGA3Q5TF21 947 aa14.99□□□□□ -0.01
VTN-203ENST00000542029 STYK1Q6J9G0 422 aa14.99□□□□□ -0.01
VTN-203ENST00000542029 ERBB4Q15303 1308 aa14.98□□□□□ -0.01
VTN-203ENST00000542029 ERVV-1B6SEH8 477 aa14.98□□□□□ -0.01
VTN-203ENST00000542029 C16orf71Q8IYS4 520 aaPredicted RBP14.98□□□□□ -0.01
VTN-203ENST00000542029 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
VTN-203ENST00000542029 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
VTN-203ENST00000542029 NIP7Q9Y221 180 aaKnown RBP eCLIP14.98□□□□□ -0.013e-12■■■■□ 20.2
VTN-203ENST00000542029 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms