RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-208ENST00000541959 ARHGEF1Q92888 912 aaKnown RBP25.78■■□□□ 1.72
ARF3-208ENST00000541959 APAF1O14727 1248 aa25.77■■□□□ 1.72
ARF3-208ENST00000541959 NLGN2Q8NFZ4 835 aa25.77■■□□□ 1.72
ARF3-208ENST00000541959 PNISRQ8TF01 805 aaKnown RBP25.77■■□□□ 1.72
ARF3-208ENST00000541959 CCDC87Q9NVE4 849 aa25.77■■□□□ 1.72
ARF3-208ENST00000541959 CYP19A1P11511 503 aaPredicted RBP25.76■■□□□ 1.71
ARF3-208ENST00000541959 SENP3-EIF4A1A0A087X0R7 540 aa25.75■■□□□ 1.71
ARF3-208ENST00000541959 STARD3NLO95772 234 aa25.75■■□□□ 1.71
ARF3-208ENST00000541959 CHD4Q14839 1912 aa25.75■■□□□ 1.71
ARF3-208ENST00000541959 C4AP0C0L4 1744 aa25.74■■□□□ 1.71
ARF3-208ENST00000541959 RFC4P35249 363 aa25.74■■□□□ 1.71
ARF3-208ENST00000541959 TEX13AQ9BXU3 409 aaPredicted RBP25.74■■□□□ 1.71
ARF3-208ENST00000541959 CD2APQ9Y5K6 639 aa25.74■■□□□ 1.71
ARF3-208ENST00000541959 YY1P25490 414 aa25.73■■□□□ 1.71
ARF3-208ENST00000541959 INTS5Q6P9B9 1019 aaKnown RBP25.73■■□□□ 1.71
ARF3-208ENST00000541959 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
ARF3-208ENST00000541959 TSPYL4Q9UJ04 414 aa25.73■■□□□ 1.71
ARF3-208ENST00000541959 LAS1LQ9Y4W2 734 aaKnown RBP25.73■■□□□ 1.71
ARF3-208ENST00000541959 CANXP27824 592 aaKnown RBP25.72■■□□□ 1.71
ARF3-208ENST00000541959 GPR162Q16538 588 aa25.72■■□□□ 1.71
ARF3-208ENST00000541959 NLGN1Q8N2Q7 840 aa25.72■■□□□ 1.71
ARF3-208ENST00000541959 TRIM35Q9UPQ4 493 aa25.72■■□□□ 1.71
ARF3-208ENST00000541959 ZBTB1Q9Y2K1 713 aa25.72■■□□□ 1.71
ARF3-208ENST00000541959 KDM3BQ7LBC6 1761 aa25.72■■□□□ 1.71
ARF3-208ENST00000541959 MMP10P09238 476 aa25.7■■□□□ 1.7
ARF3-208ENST00000541959 SNRPA1P09661 255 aaKnown RBP25.7■■□□□ 1.7
ARF3-208ENST00000541959 GYS1P13807 737 aa25.7■■□□□ 1.7
ARF3-208ENST00000541959 ZNF330Q9Y3S2 320 aaPredicted RBP25.7■■□□□ 1.7
ARF3-208ENST00000541959 GOLGB1Q14789 3259 aaKnown RBP25.7■■□□□ 1.7
ARF3-208ENST00000541959 PRAMEF22A3QJZ6 481 aa25.69■■□□□ 1.7
ARF3-208ENST00000541959 PELP1Q8IZL8 1130 aaKnown RBP25.69■■□□□ 1.7
ARF3-208ENST00000541959 SOS1Q07889 1333 aaPredicted RBP25.67■■□□□ 1.7
ARF3-208ENST00000541959 USP16Q9Y5T5 823 aa25.67■■□□□ 1.7
ARF3-208ENST00000541959 A1BGP04217 495 aa25.66■■□□□ 1.7
ARF3-208ENST00000541959 NPM2Q86SE8 214 aaKnown RBP25.66■■□□□ 1.7
ARF3-208ENST00000541959 SRP68Q9UHB9 627 aaKnown RBP25.66■■□□□ 1.7
ARF3-208ENST00000541959 COL15A1P39059 1388 aa25.66■■□□□ 1.7
ARF3-208ENST00000541959 EIF4A1P60842 406 aaKnown RBP25.65■■□□□ 1.7
ARF3-208ENST00000541959 DIEXFQ68CQ4 756 aaKnown RBP25.65■■□□□ 1.7
ARF3-208ENST00000541959 USP42Q9H9J4 1324 aaKnown RBP25.64■■□□□ 1.7
ARF3-208ENST00000541959 PIP4K2AP48426 406 aaPredicted RBP25.64■■□□□ 1.7
ARF3-208ENST00000541959 ZPR1O75312 459 aa25.63■■□□□ 1.69
ARF3-208ENST00000541959 SALL2Q9Y467 1007 aaPredicted RBP25.63■■□□□ 1.69
ARF3-208ENST00000541959 KIF13BQ9NQT8 1826 aa25.63■■□□□ 1.69
ARF3-208ENST00000541959 BABAM1Q9NWV8 329 aa25.62■■□□□ 1.69
ARF3-208ENST00000541959 YBX3P16989 372 aaKnown RBP eCLIP25.61■■□□□ 1.694e-6■□□□□ 11.2
ARF3-208ENST00000541959 FKBP8Q14318 412 aa25.61■■□□□ 1.69
ARF3-208ENST00000541959 PARP3Q9Y6F1 533 aa25.61■■□□□ 1.69
ARF3-208ENST00000541959 LAMB4A4D0S4 1761 aa25.61■■□□□ 1.69
ARF3-208ENST00000541959 GIGYF1O75420 1035 aaPredicted RBP25.6■■□□□ 1.69
ARF3-208ENST00000541959 CALD1Q05682 793 aaKnown RBP25.6■■□□□ 1.69
ARF3-208ENST00000541959 USPL1Q5W0Q7 1092 aa25.6■■□□□ 1.69
ARF3-208ENST00000541959 A0A087WZG4 1122 aa25.59■■□□□ 1.69
ARF3-208ENST00000541959 CHL1O00533 1208 aa25.58■■□□□ 1.69
ARF3-208ENST00000541959 GRIN3BO60391 1043 aa25.58■■□□□ 1.69
ARF3-208ENST00000541959 IL6STP40189 918 aaPredicted RBP25.58■■□□□ 1.69
ARF3-208ENST00000541959 EIF5P55010 431 aaKnown RBP25.58■■□□□ 1.69
ARF3-208ENST00000541959 NARFQ9UHQ1 456 aa25.58■■□□□ 1.69
ARF3-208ENST00000541959 CFAP44Q96MT7 982 aa25.57■■□□□ 1.68
ARF3-208ENST00000541959 N4BP2Q86UW6 1770 aaPredicted RBP25.56■■□□□ 1.68
ARF3-208ENST00000541959 EIF2S2P20042 333 aaKnown RBP25.56■■□□□ 1.68
ARF3-208ENST00000541959 TBC1D2BQ9UPU7 963 aa25.56■■□□□ 1.68
ARF3-208ENST00000541959 TM4SF1P30408 202 aa25.55■■□□□ 1.68
ARF3-208ENST00000541959 GNAI1P63096 354 aa25.55■■□□□ 1.68
ARF3-208ENST00000541959 IFT57Q9NWB7 429 aa25.55■■□□□ 1.68
ARF3-208ENST00000541959 C10orf71Q711Q0 1435 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 KIAA1551Q9HCM1 1747 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 CCER2I3L3R5 266 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 TGFB2P61812 414 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 DDR1Q08345 913 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 KRT24Q2M2I5 525 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 NGEFQ8N5V2 710 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 MBIPQ9NS73 344 aa25.54■■□□□ 1.68
ARF3-208ENST00000541959 NBPF26B4DH59 902 aa25.53■■□□□ 1.68
ARF3-208ENST00000541959 NBPF10Q6P3W6 841 aaKnown RBP25.53■■□□□ 1.68
ARF3-208ENST00000541959 DZIP3Q86Y13 1208 aaKnown RBP25.53■■□□□ 1.68
ARF3-208ENST00000541959 NBPF15Q8N660 670 aa25.53■■□□□ 1.68
ARF3-208ENST00000541959 NECTIN2Q92692 538 aa25.53■■□□□ 1.68
ARF3-208ENST00000541959 WWC3Q9ULE0 1092 aa25.53■■□□□ 1.68
ARF3-208ENST00000541959 MYL6BP14649 208 aa25.52■■□□□ 1.68
ARF3-208ENST00000541959 CCDC27Q2M243 656 aa25.52■■□□□ 1.68
ARF3-208ENST00000541959 WWC1Q8IX03 1113 aa25.52■■□□□ 1.68
ARF3-208ENST00000541959 BCL2L12Q9HB09 334 aa25.52■■□□□ 1.68
ARF3-208ENST00000541959 PXDNLA1KZ92 1463 aa25.52■■□□□ 1.68
ARF3-208ENST00000541959 AFDNP55196 1824 aaKnown RBP25.51■■□□□ 1.67
ARF3-208ENST00000541959 POLRMTO00411 1230 aaKnown RBP25.51■■□□□ 1.67
ARF3-208ENST00000541959 BICDL1Q6ZP65 573 aa25.51■■□□□ 1.67
ARF3-208ENST00000541959 A0A0G2JLW4 131 aa25.5■■□□□ 1.67
ARF3-208ENST00000541959 ZNF853P0CG23 659 aa25.5■■□□□ 1.67
ARF3-208ENST00000541959 NFIXQ14938 502 aa25.49■■□□□ 1.67
ARF3-208ENST00000541959 MIER1Q8N108 512 aa25.49■■□□□ 1.67
ARF3-208ENST00000541959 SCN7AQ01118 1682 aa25.48■■□□□ 1.67
ARF3-208ENST00000541959 ZNF784Q8NCA9 323 aaPredicted RBP25.48■■□□□ 1.67
ARF3-208ENST00000541959 BRCA1P38398 1863 aaKnown RBP25.48■■□□□ 1.67
ARF3-208ENST00000541959 DPEP1P16444 411 aa25.47■■□□□ 1.67
ARF3-208ENST00000541959 ELL2O00472 640 aaPredicted RBP25.46■■□□□ 1.67
ARF3-208ENST00000541959 CAMTA2O94983 1202 aa25.46■■□□□ 1.67
ARF3-208ENST00000541959 DUSP27Q5VZP5 1158 aa25.46■■□□□ 1.67
ARF3-208ENST00000541959 TSR2Q969E8 191 aaKnown RBP25.46■■□□□ 1.67
ARF3-208ENST00000541959 ERBB4Q15303 1308 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms