RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 KIF24Q5T7B8 1368 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 NFAT5O94916 1531 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 SOWAHBA6NEL2 793 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 FCHSD2O94868 740 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 HMOX1P09601 288 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 EN1Q05925 392 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 PAXIP1Q6ZW49 1069 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 FNBP4Q8N3X1 1017 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 RUNDC1Q96C34 613 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 ZFRQ96KR1 1074 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 CFAP44Q96MT7 982 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 BTG4Q9NY30 223 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 USP21Q9UK80 565 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 SMG6Q86US8 1419 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 MAPK8IP3Q9UPT6 1336 aa8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 CDK12Q9NYV4 1490 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-206ENST00000540896 APAF1O14727 1248 aa8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 MAP3K7O43318 606 aa8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 EVA1CP58658 441 aa8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 NBR1Q14596 966 aa8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 FAM98CQ17RN3 349 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 SULT6B1Q6IMI4 303 aa8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 UNC5CLQ8IV45 518 aa8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 COL14A1Q05707 1796 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-206ENST00000540896 RTL1A6NKG5 1358 aa8.74□□□□□ -1.01
CLTCL1-206ENST00000540896 LTN1O94822 1766 aa8.74□□□□□ -1.01
CLTCL1-206ENST00000540896 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
CLTCL1-206ENST00000540896 ZNF772Q68DY9 489 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-206ENST00000540896 ANKRD24Q8TF21 1146 aa8.74□□□□□ -1.01
CLTCL1-206ENST00000540896 BCL9LQ86UU0 1499 aa8.74□□□□□ -1.01
CLTCL1-206ENST00000540896 SLIT2O94813 1529 aa8.74□□□□□ -1.01
CLTCL1-206ENST00000540896 PLCH1Q4KWH8 1693 aa8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 CAMTA1Q9Y6Y1 1673 aa8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 COL3A1P02461 1466 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 SOCS7O14512 581 aa8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 PRKAR2BP31323 418 aa8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 NEUROD2Q15784 382 aa8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 TCP11L2Q8N4U5 519 aa8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 QTRT2Q9H974 415 aaKnown RBP8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 STRN4Q9NRL3 753 aa8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 RGS17Q9UGC6 210 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 MAP2P11137 1827 aaKnown RBP8.73□□□□□ -1.01
CLTCL1-206ENST00000540896 COL18A1P39060 1754 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 A0A0G2JS52 829 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 NGEFQ8N5V2 710 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 EYA1Q99502 592 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 NLRP2Q9NX02 1062 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 TRPC5Q9UL62 973 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 RRP7AQ9Y3A4 280 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 ZBED9Q6R2W3 1325 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
CLTCL1-206ENST00000540896 BLMP54132 1417 aaPredicted RBP8.71□□□□□ -1.01
CLTCL1-206ENST00000540896 NWD2Q9ULI1 1742 aa8.71□□□□□ -1.01
CLTCL1-206ENST00000540896 RGPD5Q99666 1765 aa8.71□□□□□ -1.01
CLTCL1-206ENST00000540896 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 BCAMP50895 628 aa8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 VPS72Q15906 364 aa8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 LARP1Q6PKG0 1096 aaKnown RBP8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 POTEAQ6S8J7 498 aa8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 AEBP1Q8IUX7 1158 aa8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 USHBP1Q8N6Y0 703 aa8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 LRCH3Q96II8 777 aa8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.71□□□□□ -1.02
CLTCL1-206ENST00000540896 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 ABCC6O95255 1503 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 RIPK4P57078 832 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 NBPF6Q5VWK0 638 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 TOM1L2Q6ZVM7 507 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 GJD4Q96KN9 370 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 PHACTR3Q96KR7 559 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 NBPF4Q96M43 638 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 SEPT9Q9UHD8 586 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 NRAPQ86VF7 1730 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 PEAK1Q9H792 1746 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 WDR17Q8IZU2 1322 aa8.7□□□□□ -1.02
CLTCL1-206ENST00000540896 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 RXRBP28702 533 aa8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 TMPOP42166 694 aaKnown RBP8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 PDE3BQ13370 1112 aa8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 NFE2L2Q16236 605 aa8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 SPATA31A5Q5VU36 1347 aa8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 SPATA31A7Q8IWB4 1347 aa8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 ATRNO75882 1429 aa8.69□□□□□ -1.02
CLTCL1-206ENST00000540896 PRSS12P56730 875 aa8.68□□□□□ -1.02
CLTCL1-206ENST00000540896 RBM6P78332 1123 aaKnown RBP8.68□□□□□ -1.02
CLTCL1-206ENST00000540896 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
CLTCL1-206ENST00000540896 SPATA31A1Q5TZJ5 1347 aa8.68□□□□□ -1.02
CLTCL1-206ENST00000540896 CRB1P82279 1406 aa8.68□□□□□ -1.02
CLTCL1-206ENST00000540896 GRXCR2A6NFK2 248 aa8.67□□□□□ -1.02
CLTCL1-206ENST00000540896 LMOD3Q0VAK6 560 aa8.67□□□□□ -1.02
CLTCL1-206ENST00000540896 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
CLTCL1-206ENST00000540896 WWC1Q8IX03 1113 aa8.67□□□□□ -1.02
CLTCL1-206ENST00000540896 RTF1Q92541 710 aaKnown RBP8.67□□□□□ -1.02
CLTCL1-206ENST00000540896 CDCA7LQ96GN5 454 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms