RNA–Protein interactions for RNA: ENST00000540115.1

ACSL3-210, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 624 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-210ENST00000540115 A0A087WZG4 1122 aa13.22□□□□□ -0.29
ACSL3-210ENST00000540115 CYP19A1P11511 503 aaPredicted RBP13.22□□□□□ -0.29
ACSL3-210ENST00000540115 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
ACSL3-210ENST00000540115 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
ACSL3-210ENST00000540115 GYS1P13807 737 aa13.21□□□□□ -0.29
ACSL3-210ENST00000540115 INTS5Q6P9B9 1019 aaKnown RBP13.21□□□□□ -0.29
ACSL3-210ENST00000540115 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.29
ACSL3-210ENST00000540115 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.3
ACSL3-210ENST00000540115 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
ACSL3-210ENST00000540115 COL24A1Q17RW2 1714 aa13.2□□□□□ -0.3
ACSL3-210ENST00000540115 PNISRQ8TF01 805 aaKnown RBP13.2□□□□□ -0.3
ACSL3-210ENST00000540115 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
ACSL3-210ENST00000540115 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
ACSL3-210ENST00000540115 TGFB2P61812 414 aa13.19□□□□□ -0.3
ACSL3-210ENST00000540115 TAF7Q15545 349 aaPredicted RBP13.19□□□□□ -0.3
ACSL3-210ENST00000540115 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
ACSL3-210ENST00000540115 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
ACSL3-210ENST00000540115 CANXP27824 592 aaKnown RBP13.18□□□□□ -0.3
ACSL3-210ENST00000540115 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
ACSL3-210ENST00000540115 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
ACSL3-210ENST00000540115 MCM10Q7L590 875 aa13.18□□□□□ -0.3
ACSL3-210ENST00000540115 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
ACSL3-210ENST00000540115 ADAMTS7Q9UKP4 1686 aa13.18□□□□□ -0.3
ACSL3-210ENST00000540115 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
ACSL3-210ENST00000540115 LMOD3Q0VAK6 560 aa13.17□□□□□ -0.3
ACSL3-210ENST00000540115 SRP68Q9UHB9 627 aaKnown RBP13.17□□□□□ -0.3
ACSL3-210ENST00000540115 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
ACSL3-210ENST00000540115 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
ACSL3-210ENST00000540115 KCPQ6ZWJ8 1503 aa13.17□□□□□ -0.3
ACSL3-210ENST00000540115 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
ACSL3-210ENST00000540115 COL15A1P39059 1388 aa13.16□□□□□ -0.3
ACSL3-210ENST00000540115 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
ACSL3-210ENST00000540115 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
ACSL3-210ENST00000540115 IL6STP40189 918 aaPredicted RBP13.15□□□□□ -0.3
ACSL3-210ENST00000540115 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
ACSL3-210ENST00000540115 FKBP8Q14318 412 aa13.15□□□□□ -0.3
ACSL3-210ENST00000540115 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
ACSL3-210ENST00000540115 ZNF330Q9Y3S2 320 aaPredicted RBP13.15□□□□□ -0.3
ACSL3-210ENST00000540115 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
ACSL3-210ENST00000540115 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.312e-11■■□□□ 12
ACSL3-210ENST00000540115 RIPK4P57078 832 aa13.13□□□□□ -0.31
ACSL3-210ENST00000540115 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
ACSL3-210ENST00000540115 TJP1Q07157 1748 aa13.13□□□□□ -0.31
ACSL3-210ENST00000540115 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
ACSL3-210ENST00000540115 KCNQ3O43525 872 aa13.12□□□□□ -0.31
ACSL3-210ENST00000540115 TM4SF1P30408 202 aa13.12□□□□□ -0.31
ACSL3-210ENST00000540115 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
ACSL3-210ENST00000540115 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
ACSL3-210ENST00000540115 NPHP1O15259 732 aa13.11□□□□□ -0.31
ACSL3-210ENST00000540115 A1BGP04217 495 aa13.11□□□□□ -0.31
ACSL3-210ENST00000540115 BABAM1Q9NWV8 329 aa13.11□□□□□ -0.31
ACSL3-210ENST00000540115 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
ACSL3-210ENST00000540115 C10orf71Q711Q0 1435 aa13.11□□□□□ -0.31
ACSL3-210ENST00000540115 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 SERPINB2P05120 415 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 DDR1Q08345 913 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 NFIXQ14938 502 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 DZIP3Q86Y13 1208 aaKnown RBP13.1□□□□□ -0.31
ACSL3-210ENST00000540115 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 BCS1LQ9Y276 419 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
ACSL3-210ENST00000540115 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
ACSL3-210ENST00000540115 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
ACSL3-210ENST00000540115 DPEP1P16444 411 aa13.09□□□□□ -0.31
ACSL3-210ENST00000540115 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
ACSL3-210ENST00000540115 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
ACSL3-210ENST00000540115 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
ACSL3-210ENST00000540115 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
ACSL3-210ENST00000540115 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
ACSL3-210ENST00000540115 TSPYL4Q9UJ04 414 aa13.09□□□□□ -0.31
ACSL3-210ENST00000540115 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
ACSL3-210ENST00000540115 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
ACSL3-210ENST00000540115 RGL2O15211 777 aa13.08□□□□□ -0.32
ACSL3-210ENST00000540115 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.32
ACSL3-210ENST00000540115 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
ACSL3-210ENST00000540115 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.32
ACSL3-210ENST00000540115 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
ACSL3-210ENST00000540115 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
ACSL3-210ENST00000540115 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
ACSL3-210ENST00000540115 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
ACSL3-210ENST00000540115 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
ACSL3-210ENST00000540115 CHD4Q14839 1912 aa13.07□□□□□ -0.32
ACSL3-210ENST00000540115 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
ACSL3-210ENST00000540115 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
ACSL3-210ENST00000540115 H0YIN7 160 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 ANP32CO43423 234 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
ACSL3-210ENST00000540115 CAMTA2O94983 1202 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 PDE6BP35913 854 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 ST5P78524 1137 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 CALD1Q05682 793 aaKnown RBP13.06□□□□□ -0.32
ACSL3-210ENST00000540115 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 ARHGAP27Q6ZUM4 889 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 THUMPD2Q9BTF0 503 aaKnown RBP13.06□□□□□ -0.32
ACSL3-210ENST00000540115 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
ACSL3-210ENST00000540115 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
ACSL3-210ENST00000540115 KIF6Q6ZMV9 814 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms