RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
SNHG1-212ENST00000539975 HSP90AB2PQ58FF8 381 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 RAPGEF4Q8WZA2 1011 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 RBM27Q9P2N5 1060 aaKnown RBP8.66□□□□□ -1.02
SNHG1-212ENST00000539975 RGS17Q9UGC6 210 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-212ENST00000539975 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 CRB1P82279 1406 aa8.65□□□□□ -1.02
SNHG1-212ENST00000539975 SPATA31A1Q5TZJ5 1347 aa8.65□□□□□ -1.02
SNHG1-212ENST00000539975 BHMG1C9JSJ3 638 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-212ENST00000539975 DIAPH1O60610 1272 aaKnown RBP8.65□□□□□ -1.02
SNHG1-212ENST00000539975 NEFMP07197 916 aa8.65□□□□□ -1.02
SNHG1-212ENST00000539975 PRSS12P56730 875 aa8.65□□□□□ -1.02
SNHG1-212ENST00000539975 NBPF3Q9H094 633 aa8.65□□□□□ -1.02
SNHG1-212ENST00000539975 PHRF1Q9P1Y6 1649 aaKnown RBP8.65□□□□□ -1.03
SNHG1-212ENST00000539975 NFAT5O94916 1531 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 ATRNO75882 1429 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 TRIM6-TRIM34B2RNG4 842 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 EXOC5O00471 708 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 IL2RBP14784 551 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 PPP2R1AP30153 589 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 DDB1Q16531 1140 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 BARGINQ6ZT62 677 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 ABCC6O95255 1503 aa8.64□□□□□ -1.03
SNHG1-212ENST00000539975 COL5A2P05997 1499 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-212ENST00000539975 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
SNHG1-212ENST00000539975 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-212ENST00000539975 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
SNHG1-212ENST00000539975 PNNQ9H307 717 aaKnown RBP8.63□□□□□ -1.03
SNHG1-212ENST00000539975 KIF20BQ96Q89 1820 aa8.63□□□□□ -1.03
SNHG1-212ENST00000539975 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
SNHG1-212ENST00000539975 MYBBP1AQ9BQG0 1328 aaKnown RBP8.62□□□□□ -1.03
SNHG1-212ENST00000539975 EIF4A2Q14240 407 aaKnown RBP8.62□□□□□ -1.03
SNHG1-212ENST00000539975 PROX2Q3B8N5 592 aa8.62□□□□□ -1.03
SNHG1-212ENST00000539975 KRT27Q7Z3Y8 459 aa8.62□□□□□ -1.03
SNHG1-212ENST00000539975 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
SNHG1-212ENST00000539975 CDCA7LQ96GN5 454 aa8.62□□□□□ -1.03
SNHG1-212ENST00000539975 PRKRIP1Q9H875 184 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-212ENST00000539975 CDHR5Q9HBB8 845 aa8.62□□□□□ -1.03
SNHG1-212ENST00000539975 NPDC1Q9NQX5 325 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-212ENST00000539975 ABCA3Q99758 1704 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 FCHSD2O94868 740 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 PTGDRQ13258 359 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 SF3B2Q13435 895 aaKnown RBP8.61□□□□□ -1.03
SNHG1-212ENST00000539975 WDR43Q15061 677 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNHG1-212ENST00000539975 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
SNHG1-212ENST00000539975 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 KIAA1468Q9P260 1216 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 SPG7Q9UQ90 795 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 USP54Q70EL1 1684 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
SNHG1-212ENST00000539975 MARF1Q9Y4F3 1742 aaKnown RBP8.6□□□□□ -1.03
SNHG1-212ENST00000539975 CDK12Q9NYV4 1490 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-212ENST00000539975 U2AF1L5P0DN76 240 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-212ENST00000539975 U2AF1Q01081 240 aaKnown RBP eCLIP8.6□□□□□ -1.036e-8■■■□□ 17.5
SNHG1-212ENST00000539975 SULT6B1Q6IMI4 303 aa8.6□□□□□ -1.03
SNHG1-212ENST00000539975 USHBP1Q8N6Y0 703 aa8.6□□□□□ -1.03
SNHG1-212ENST00000539975 ZCRB1Q8TBF4 217 aaKnown RBP8.6□□□□□ -1.03
SNHG1-212ENST00000539975 DDX54Q8TDD1 881 aaKnown RBP8.6□□□□□ -1.03
SNHG1-212ENST00000539975 RNF166Q96A37 237 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-212ENST00000539975 EYA1Q99502 592 aa8.6□□□□□ -1.03
SNHG1-212ENST00000539975 CRYBG1Q9Y4K1 1723 aa8.6□□□□□ -1.03
SNHG1-212ENST00000539975 PLCH1Q4KWH8 1693 aa8.59□□□□□ -1.03
SNHG1-212ENST00000539975 IL13P35225 146 aa8.59□□□□□ -1.03
SNHG1-212ENST00000539975 AMOTQ4VCS5 1084 aa8.59□□□□□ -1.03
SNHG1-212ENST00000539975 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-212ENST00000539975 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
SNHG1-212ENST00000539975 DIEXFQ68CQ4 756 aaKnown RBP8.59□□□□□ -1.03
SNHG1-212ENST00000539975 FAM196AQ6ZSG2 479 aa8.59□□□□□ -1.03
SNHG1-212ENST00000539975 TTC13Q8NBP0 860 aa8.59□□□□□ -1.03
SNHG1-212ENST00000539975 TSKSQ9UJT2 592 aa8.59□□□□□ -1.03
SNHG1-212ENST00000539975 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
SNHG1-212ENST00000539975 C1orf141Q5JVX7 400 aa8.58□□□□□ -1.04
SNHG1-212ENST00000539975 LMO7Q8WWI1 1683 aa8.58□□□□□ -1.04
SNHG1-212ENST00000539975 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.57□□□□□ -1.04
SNHG1-212ENST00000539975 NBPF26B4DH59 902 aa8.57□□□□□ -1.04
SNHG1-212ENST00000539975 HSP90AB1P08238 724 aaKnown RBP8.57□□□□□ -1.04
SNHG1-212ENST00000539975 HMOX1P09601 288 aa8.57□□□□□ -1.04
SNHG1-212ENST00000539975 HIC1Q14526 733 aa8.57□□□□□ -1.04
SNHG1-212ENST00000539975 CCDC125Q86Z20 511 aa8.57□□□□□ -1.04
SNHG1-212ENST00000539975 ANKRD26Q9UPS8 1709 aa8.57□□□□□ -1.04
SNHG1-212ENST00000539975 IGSF1Q8N6C5 1336 aa8.56□□□□□ -1.04
SNHG1-212ENST00000539975 PCDH11XQ9BZA7 1347 aa8.56□□□□□ -1.04
SNHG1-212ENST00000539975 PCDH11YQ9BZA8 1340 aa8.56□□□□□ -1.04
SNHG1-212ENST00000539975 MAPK8IP3Q9UPT6 1336 aa8.56□□□□□ -1.04
SNHG1-212ENST00000539975 LTN1O94822 1766 aa8.56□□□□□ -1.04
SNHG1-212ENST00000539975 IFNL2Q8IZJ0 200 aa8.56□□□□□ -1.04
SNHG1-212ENST00000539975 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
SNHG1-212ENST00000539975 OVOS2A0A0G2JMS6 1433 aa8.55□□□□□ -1.04
SNHG1-212ENST00000539975 RGS12O14924 1447 aa8.55□□□□□ -1.04
SNHG1-212ENST00000539975 ILDR2Q71H61 639 aa8.55□□□□□ -1.04
SNHG1-212ENST00000539975 GPIHBP1Q8IV16 184 aa8.55□□□□□ -1.04
SNHG1-212ENST00000539975 SYTL4Q96C24 671 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-212ENST00000539975 NRAPQ86VF7 1730 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 COL18A1P39060 1754 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 GLI3P10071 1580 aa8.54□□□□□ -1.04
SNHG1-212ENST00000539975 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms