RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
LDHB-208ENST00000539782 RNMTO43148 476 aaKnown RBP9.74□□□□□ -0.85
LDHB-208ENST00000539782 HMOX1P09601 288 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 CYP19A1P11511 503 aaPredicted RBP9.74□□□□□ -0.85
LDHB-208ENST00000539782 TM4SF1P30408 202 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 HTRA3P83110 453 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 RASSF7Q02833 373 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 SLC39A6Q13433 755 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 NPM2Q86SE8 214 aaKnown RBP9.74□□□□□ -0.85
LDHB-208ENST00000539782 DNAJC5GQ8N7S2 189 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 KLRG1Q96E93 195 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 LGR6Q9HBX8 967 aa9.74□□□□□ -0.85
LDHB-208ENST00000539782 MRC1P22897 1456 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 A0A087WZG4 1122 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 H0YIN7 160 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 SERPINB2P05120 415 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 LMNB1P20700 586 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 CANXP27824 592 aaKnown RBP9.73□□□□□ -0.85
LDHB-208ENST00000539782 NFIXQ14938 502 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 BICDL1Q6ZP65 573 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 C2CD5Q86YS7 1000 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 TTLL6Q8N841 843 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 ZBTB1Q9Y2K1 713 aa9.73□□□□□ -0.85
LDHB-208ENST00000539782 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
LDHB-208ENST00000539782 NPHP1O15259 732 aa9.72□□□□□ -0.85
LDHB-208ENST00000539782 DIAPH1O60610 1272 aaKnown RBP9.72□□□□□ -0.85
LDHB-208ENST00000539782 STARD3NLO95772 234 aa9.72□□□□□ -0.85
LDHB-208ENST00000539782 VSIG10Q8N0Z9 540 aa9.72□□□□□ -0.85
LDHB-208ENST00000539782 GLTPD2A6NH11 291 aa9.71□□□□□ -0.86
LDHB-208ENST00000539782 VEGFAP15692 232 aaPredicted RBP9.71□□□□□ -0.86
LDHB-208ENST00000539782 TEFQ10587 303 aa9.71□□□□□ -0.86
LDHB-208ENST00000539782 MTHFSDQ2M296 383 aaKnown RBP9.71□□□□□ -0.86
LDHB-208ENST00000539782 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
LDHB-208ENST00000539782 ADAMTS7Q9UKP4 1686 aa9.71□□□□□ -0.86
LDHB-208ENST00000539782 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
LDHB-208ENST00000539782 JMYQ8N9B5 988 aa9.7□□□□□ -0.86
LDHB-208ENST00000539782 ZNF622Q969S3 477 aaKnown RBP eCLIP9.7□□□□□ -0.86
LDHB-208ENST00000539782 ZNF219Q9P2Y4 722 aaPredicted RBP9.7□□□□□ -0.86
LDHB-208ENST00000539782 PDZRN3Q9UPQ7 1066 aa9.7□□□□□ -0.86
LDHB-208ENST00000539782 U2SURPO15042 1029 aaKnown RBP9.69□□□□□ -0.86
LDHB-208ENST00000539782 CAPN15O75808 1086 aa9.69□□□□□ -0.86
LDHB-208ENST00000539782 PDE6BP35913 854 aa9.69□□□□□ -0.86
LDHB-208ENST00000539782 AFDNP55196 1824 aaKnown RBP9.69□□□□□ -0.86
LDHB-208ENST00000539782 CNGB1Q14028 1251 aaPredicted RBP9.69□□□□□ -0.86
LDHB-208ENST00000539782 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
LDHB-208ENST00000539782 DPY19L2Q6NUT2 758 aa9.69□□□□□ -0.86
LDHB-208ENST00000539782 TIAM2Q8IVF5 1701 aa9.69□□□□□ -0.86
LDHB-208ENST00000539782 TNS4Q8IZW8 715 aa9.69□□□□□ -0.86
LDHB-208ENST00000539782 CARMIL3Q8ND23 1372 aa9.69□□□□□ -0.86
LDHB-208ENST00000539782 TEX13AQ9BXU3 409 aaPredicted RBP9.69□□□□□ -0.86
LDHB-208ENST00000539782 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
LDHB-208ENST00000539782 DLEC1Q9Y238 1755 aa9.68□□□□□ -0.86
LDHB-208ENST00000539782 NRXN2Q9P2S2 1712 aa9.68□□□□□ -0.86
LDHB-208ENST00000539782 KIF7Q2M1P5 1343 aa9.68□□□□□ -0.86
LDHB-208ENST00000539782 ST5P78524 1137 aa9.68□□□□□ -0.86
LDHB-208ENST00000539782 COL13A1Q5TAT6 717 aaPredicted RBP9.68□□□□□ -0.86
LDHB-208ENST00000539782 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
LDHB-208ENST00000539782 SBF1O95248 1867 aa9.68□□□□□ -0.86
LDHB-208ENST00000539782 HEG1Q9ULI3 1381 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 GNAT3A8MTJ3 354 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 NFKBIEO00221 500 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 C21orf2O43822 256 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 EIF5P55010 431 aaKnown RBP9.67□□□□□ -0.86
LDHB-208ENST00000539782 ERFEQ4G0M1 354 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 TBC1D9BQ66K14 1250 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 CNBD1Q8NA66 436 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 BRIP1Q9BX63 1249 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 UBR2Q8IWV8 1755 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 SCN7AQ01118 1682 aa9.67□□□□□ -0.86
LDHB-208ENST00000539782 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
LDHB-208ENST00000539782 IL6STP40189 918 aaPredicted RBP9.66□□□□□ -0.86
LDHB-208ENST00000539782 SOGA3Q5TF21 947 aa9.66□□□□□ -0.86
LDHB-208ENST00000539782 PRR5LQ6MZQ0 368 aa9.66□□□□□ -0.86
LDHB-208ENST00000539782 ZNF790Q6PG37 636 aa9.66□□□□□ -0.86
LDHB-208ENST00000539782 CCDC24Q8N4L8 307 aa9.66□□□□□ -0.86
LDHB-208ENST00000539782 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
LDHB-208ENST00000539782 ZNF496Q96IT1 587 aaPredicted RBP9.66□□□□□ -0.86
LDHB-208ENST00000539782 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
LDHB-208ENST00000539782 TAOK3Q9H2K8 898 aa9.66□□□□□ -0.86
LDHB-208ENST00000539782 HSPA1AP0DMV8 641 aaKnown RBP9.65□□□□□ -0.86
LDHB-208ENST00000539782 HSPA1BP0DMV9 641 aaKnown RBP9.65□□□□□ -0.86
LDHB-208ENST00000539782 PRELPP51888 382 aa9.65□□□□□ -0.86
LDHB-208ENST00000539782 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
LDHB-208ENST00000539782 BTBD11A6QL63 1104 aa9.64□□□□□ -0.87
LDHB-208ENST00000539782 CHADLQ6NUI6 762 aa9.64□□□□□ -0.87
LDHB-208ENST00000539782 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
LDHB-208ENST00000539782 ZNF652Q9Y2D9 606 aa9.64□□□□□ -0.87
LDHB-208ENST00000539782 LTBP3Q9NS15 1303 aa9.63□□□□□ -0.87
LDHB-208ENST00000539782 COL11A2P13942 1736 aaPredicted RBP9.63□□□□□ -0.87
LDHB-208ENST00000539782 IQCA1LA6NCM1 817 aa9.63□□□□□ -0.87
LDHB-208ENST00000539782 A1BGP04217 495 aa9.63□□□□□ -0.87
LDHB-208ENST00000539782 STYK1Q6J9G0 422 aa9.63□□□□□ -0.87
LDHB-208ENST00000539782 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
LDHB-208ENST00000539782 NBPF5PQ86XG9 351 aaPredicted RBP9.63□□□□□ -0.87
LDHB-208ENST00000539782 IL17REQ8NFR9 667 aa9.63□□□□□ -0.87
LDHB-208ENST00000539782 RTF1Q92541 710 aaKnown RBP9.63□□□□□ -0.87
LDHB-208ENST00000539782 MASTLQ96GX5 879 aa9.63□□□□□ -0.87
LDHB-208ENST00000539782 COL3A1P02461 1466 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms