RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
CCDC144NL-203ENST00000539484 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
CCDC144NL-203ENST00000539484 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
CCDC144NL-203ENST00000539484 ACSBG1Q96GR2 724 aa12.7□□□□□ -0.38
CCDC144NL-203ENST00000539484 SLC12A5Q9H2X9 1139 aa12.7□□□□□ -0.38
CCDC144NL-203ENST00000539484 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
CCDC144NL-203ENST00000539484 CHD4Q14839 1912 aa12.69□□□□□ -0.38
CCDC144NL-203ENST00000539484 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
CCDC144NL-203ENST00000539484 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
CCDC144NL-203ENST00000539484 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
CCDC144NL-203ENST00000539484 CD163L1Q9NR16 1453 aa12.68□□□□□ -0.38
CCDC144NL-203ENST00000539484 GFRA3O60609 400 aa12.68□□□□□ -0.38
CCDC144NL-203ENST00000539484 COL9A1P20849 921 aa12.68□□□□□ -0.38
CCDC144NL-203ENST00000539484 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
CCDC144NL-203ENST00000539484 PUS7Q96PZ0 661 aaKnown RBP12.68□□□□□ -0.38
CCDC144NL-203ENST00000539484 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
CCDC144NL-203ENST00000539484 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
CCDC144NL-203ENST00000539484 MYOM1P52179 1685 aa12.67□□□□□ -0.38
CCDC144NL-203ENST00000539484 LCE2BO14633 110 aa12.66□□□□□ -0.38
CCDC144NL-203ENST00000539484 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
CCDC144NL-203ENST00000539484 COG3Q96JB2 828 aa12.66□□□□□ -0.38
CCDC144NL-203ENST00000539484 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
CCDC144NL-203ENST00000539484 KIAA1468Q9P260 1216 aa12.66□□□□□ -0.38
CCDC144NL-203ENST00000539484 PCDHGA10Q9Y5H3 936 aa12.66□□□□□ -0.38
CCDC144NL-203ENST00000539484 AMPHP49418 695 aa12.65□□□□□ -0.38
CCDC144NL-203ENST00000539484 IP6K1Q92551 441 aa12.65□□□□□ -0.38
CCDC144NL-203ENST00000539484 PDGFDQ9GZP0 370 aaPredicted RBP12.65□□□□□ -0.38
CCDC144NL-203ENST00000539484 RGPD2P0DJD1 1756 aa12.65□□□□□ -0.38
CCDC144NL-203ENST00000539484 DDX54Q8TDD1 881 aaKnown RBP12.64□□□□□ -0.39
CCDC144NL-203ENST00000539484 ST20-MTHFSA0A0A6YYL1 179 aa12.63□□□□□ -0.39
CCDC144NL-203ENST00000539484 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
CCDC144NL-203ENST00000539484 FHDC1Q9C0D6 1143 aaPredicted RBP12.62□□□□□ -0.39
CCDC144NL-203ENST00000539484 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
CCDC144NL-203ENST00000539484 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
CCDC144NL-203ENST00000539484 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
CCDC144NL-203ENST00000539484 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
CCDC144NL-203ENST00000539484 QSER1Q2KHR3 1735 aa12.61□□□□□ -0.39
CCDC144NL-203ENST00000539484 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
CCDC144NL-203ENST00000539484 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 PAPPAQ13219 1627 aa12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 HOXC9P31274 260 aa12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 TMF1P82094 1093 aa12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 ARXQ96QS3 562 aa12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 SEPT9Q9UHD8 586 aaPredicted RBP12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
CCDC144NL-203ENST00000539484 ANKRD36BQ8N2N9 1353 aa12.59□□□□□ -0.39
CCDC144NL-203ENST00000539484 POLD1P28340 1107 aa12.59□□□□□ -0.39
CCDC144NL-203ENST00000539484 TESK2Q96S53 571 aa12.59□□□□□ -0.39
CCDC144NL-203ENST00000539484 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
CCDC144NL-203ENST00000539484 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 LY75O60449 1722 aa12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 CDCA8Q53HL2 280 aa12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 DDX27Q96GQ7 796 aaKnown RBP12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 TFCP2L1Q9NZI6 479 aa12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
CCDC144NL-203ENST00000539484 RTL1A6NKG5 1358 aa12.57□□□□□ -0.4
CCDC144NL-203ENST00000539484 SHANK3Q9BYB0 1731 aa12.57□□□□□ -0.4
CCDC144NL-203ENST00000539484 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
CCDC144NL-203ENST00000539484 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
CCDC144NL-203ENST00000539484 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
CCDC144NL-203ENST00000539484 LRRC4BQ9NT99 713 aa12.57□□□□□ -0.4
CCDC144NL-203ENST00000539484 PHF14O94880 888 aa12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 FBLN1P23142 703 aa12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 RRS1Q15050 365 aaKnown RBP12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 HPS5Q9UPZ3 1129 aa12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
CCDC144NL-203ENST00000539484 GPR162Q16538 588 aa12.55□□□□□ -0.4
CCDC144NL-203ENST00000539484 USP47Q96K76 1375 aa12.55□□□□□ -0.4
CCDC144NL-203ENST00000539484 MAP2P11137 1827 aaKnown RBP12.54□□□□□ -0.4
CCDC144NL-203ENST00000539484 FYB1O15117 783 aa12.54□□□□□ -0.4
CCDC144NL-203ENST00000539484 LRCH3Q96II8 777 aa12.54□□□□□ -0.4
CCDC144NL-203ENST00000539484 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
CCDC144NL-203ENST00000539484 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
CCDC144NL-203ENST00000539484 MEGF6O75095 1541 aa12.53□□□□□ -0.4
CCDC144NL-203ENST00000539484 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
CCDC144NL-203ENST00000539484 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
CCDC144NL-203ENST00000539484 PRKD2Q9BZL6 878 aa12.53□□□□□ -0.4
CCDC144NL-203ENST00000539484 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
CCDC144NL-203ENST00000539484 ITGB4P16144 1822 aa12.53□□□□□ -0.4
CCDC144NL-203ENST00000539484 COL24A1Q17RW2 1714 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 KCNQ4P56696 695 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 NBPF6Q5VWK0 638 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 NBPF4Q96M43 638 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 EMILIN3Q9NT22 766 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.41
CCDC144NL-203ENST00000539484 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
CCDC144NL-203ENST00000539484 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
CCDC144NL-203ENST00000539484 C6orf132Q5T0Z8 1188 aa12.51□□□□□ -0.41
CCDC144NL-203ENST00000539484 FLT4P35916 1363 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms