RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
NPIPB4-211ENST00000539318 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
NPIPB4-211ENST00000539318 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
NPIPB4-211ENST00000539318 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
NPIPB4-211ENST00000539318 C4BP0C0L5 1744 aa11.65□□□□□ -0.54
NPIPB4-211ENST00000539318 UBR3Q6ZT12 1888 aa11.65□□□□□ -0.54
NPIPB4-211ENST00000539318 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
NPIPB4-211ENST00000539318 RPS6KA4O75676 772 aa11.64□□□□□ -0.55
NPIPB4-211ENST00000539318 CRKLP46109 303 aaKnown RBP11.64□□□□□ -0.55
NPIPB4-211ENST00000539318 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
NPIPB4-211ENST00000539318 C8orf58Q8NAV2 365 aa11.64□□□□□ -0.55
NPIPB4-211ENST00000539318 TUBGCP6Q96RT7 1819 aa11.63□□□□□ -0.55
NPIPB4-211ENST00000539318 STARD3NLO95772 234 aa11.63□□□□□ -0.55
NPIPB4-211ENST00000539318 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
NPIPB4-211ENST00000539318 TSR2Q969E8 191 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-211ENST00000539318 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
NPIPB4-211ENST00000539318 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
NPIPB4-211ENST00000539318 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
NPIPB4-211ENST00000539318 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 A1BGP04217 495 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 HOXB7P09629 217 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 R3HDM1Q15032 1099 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 PDIA6Q15084 440 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 NBPF10Q6P3W6 841 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 SMIM5Q71RC9 77 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 NBPF15Q8N660 670 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 TSPYL6Q8N831 410 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 PDGFDQ9GZP0 370 aaPredicted RBP11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 CCDC87Q9NVE4 849 aa11.62□□□□□ -0.55
NPIPB4-211ENST00000539318 PNPLA7Q6ZV29 1317 aa11.61□□□□□ -0.55
NPIPB4-211ENST00000539318 FANCIQ9NVI1 1328 aa11.61□□□□□ -0.55
NPIPB4-211ENST00000539318 EIF5P55010 431 aaKnown RBP11.61□□□□□ -0.55
NPIPB4-211ENST00000539318 LRP10Q7Z4F1 713 aa11.61□□□□□ -0.55
NPIPB4-211ENST00000539318 COL23A1Q86Y22 540 aaPredicted RBP11.61□□□□□ -0.55
NPIPB4-211ENST00000539318 TFCP2L1Q9NZI6 479 aa11.61□□□□□ -0.55
NPIPB4-211ENST00000539318 ZBTB1Q9Y2K1 713 aa11.61□□□□□ -0.55
NPIPB4-211ENST00000539318 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 E9PSI1 815 aa11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 VAMP4O75379 141 aa11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 SSFA2P28290 1259 aa11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 AK7Q96M32 723 aa11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 RTCBQ9Y3I0 505 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
NPIPB4-211ENST00000539318 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 ELL2O00472 640 aaPredicted RBP11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 GNPATO15228 680 aa11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 IL6STP40189 918 aaPredicted RBP11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 EXOSC9Q06265 439 aaKnown RBP11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 CASZ1Q86V15 1759 aa11.59□□□□□ -0.55
NPIPB4-211ENST00000539318 EIF2S2P20042 333 aaKnown RBP11.58□□□□□ -0.56
NPIPB4-211ENST00000539318 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
NPIPB4-211ENST00000539318 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
NPIPB4-211ENST00000539318 ERBB4Q15303 1308 aa11.58□□□□□ -0.56
NPIPB4-211ENST00000539318 PIP4K2AP48426 406 aaPredicted RBP11.57□□□□□ -0.56
NPIPB4-211ENST00000539318 PROSER3Q2NL68 480 aa11.57□□□□□ -0.56
NPIPB4-211ENST00000539318 TWISTNBQ3B726 338 aaPredicted RBP11.57□□□□□ -0.56
NPIPB4-211ENST00000539318 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
NPIPB4-211ENST00000539318 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
NPIPB4-211ENST00000539318 HDGFL1Q5TGJ6 251 aa11.56□□□□□ -0.56
NPIPB4-211ENST00000539318 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
NPIPB4-211ENST00000539318 NARFQ9UHQ1 456 aa11.56□□□□□ -0.56
NPIPB4-211ENST00000539318 SRCAPQ6ZRS2 3230 aa11.56□□□□□ -0.56
NPIPB4-211ENST00000539318 PHF14O94880 888 aa11.55□□□□□ -0.56
NPIPB4-211ENST00000539318 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
NPIPB4-211ENST00000539318 BCL2L12Q9HB09 334 aa11.55□□□□□ -0.56
NPIPB4-211ENST00000539318 DBF4Q9UBU7 674 aaPredicted RBP11.55□□□□□ -0.56
NPIPB4-211ENST00000539318 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
NPIPB4-211ENST00000539318 COL15A1P39059 1388 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 A0A087WZG4 1122 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 ANXA1P04083 346 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 GYS1P13807 737 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 RFC4P35249 363 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 CCDC30Q5VVM6 783 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 CHMP4AQ9BY43 222 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 CHPF2Q9P2E5 772 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 SRP68Q9UHB9 627 aaKnown RBP11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 TBC1D2BQ9UPU7 963 aa11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 USP42Q9H9J4 1324 aaKnown RBP11.54□□□□□ -0.56
NPIPB4-211ENST00000539318 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
NPIPB4-211ENST00000539318 CAMTA2O94983 1202 aa11.53□□□□□ -0.56
NPIPB4-211ENST00000539318 MYL6BP14649 208 aa11.53□□□□□ -0.56
NPIPB4-211ENST00000539318 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
NPIPB4-211ENST00000539318 TTLL7Q6ZT98 887 aa11.53□□□□□ -0.56
NPIPB4-211ENST00000539318 MTFR1LQ9H019 292 aa11.53□□□□□ -0.56
NPIPB4-211ENST00000539318 NUP98P52948 1817 aa11.52□□□□□ -0.57
NPIPB4-211ENST00000539318 ERVV-1B6SEH8 477 aa11.52□□□□□ -0.57
NPIPB4-211ENST00000539318 RGL2O15211 777 aa11.52□□□□□ -0.57
NPIPB4-211ENST00000539318 ZBTB7AO95365 584 aa11.52□□□□□ -0.57
NPIPB4-211ENST00000539318 CT47B1P0C2W7 299 aaPredicted RBP11.52□□□□□ -0.57
NPIPB4-211ENST00000539318 TM4SF1P30408 202 aa11.52□□□□□ -0.57
NPIPB4-211ENST00000539318 PTGER2P43116 358 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms