RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 SMC3Q9UQE7 1217 aa20.65■□□□□ 0.9
C2CD3-213ENST00000539061 TUBGCP6Q96RT7 1819 aa20.65■□□□□ 0.9
C2CD3-213ENST00000539061 LIMCH1Q9UPQ0 1083 aa20.65■□□□□ 0.9
C2CD3-213ENST00000539061 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.9
C2CD3-213ENST00000539061 SPC24Q8NBT2 197 aa20.64■□□□□ 0.89
C2CD3-213ENST00000539061 TTC14Q96N46 770 aa20.64■□□□□ 0.89
C2CD3-213ENST00000539061 EIF4A2Q14240 407 aaKnown RBP20.63■□□□□ 0.89
C2CD3-213ENST00000539061 FEZ1Q99689 392 aa20.63■□□□□ 0.89
C2CD3-213ENST00000539061 CCDC192P0DO97 292 aa20.63■□□□□ 0.89
C2CD3-213ENST00000539061 AK2P54819 239 aa20.63■□□□□ 0.89
C2CD3-213ENST00000539061 IL25Q9H293 177 aa20.63■□□□□ 0.89
C2CD3-213ENST00000539061 DLC1Q96QB1 1528 aa20.63■□□□□ 0.89
C2CD3-213ENST00000539061 U2AF2P26368 475 aaKnown RBP eCLIP20.62■□□□□ 0.89
C2CD3-213ENST00000539061 SNX14Q9Y5W7 946 aa20.62■□□□□ 0.89
C2CD3-213ENST00000539061 RAD50Q92878 1312 aa20.62■□□□□ 0.89
C2CD3-213ENST00000539061 CRB1P82279 1406 aa20.62■□□□□ 0.89
C2CD3-213ENST00000539061 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
C2CD3-213ENST00000539061 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
C2CD3-213ENST00000539061 RUFY3Q7L099 469 aa20.61■□□□□ 0.89
C2CD3-213ENST00000539061 STK31Q9BXU1 1019 aa20.6■□□□□ 0.89
C2CD3-213ENST00000539061 SGSM2O43147 1006 aa20.6■□□□□ 0.89
C2CD3-213ENST00000539061 TSPYL4Q9UJ04 414 aa20.6■□□□□ 0.89
C2CD3-213ENST00000539061 ARHGEF10O15013 1369 aa20.6■□□□□ 0.89
C2CD3-213ENST00000539061 DNM1Q05193 864 aaKnown RBP20.59■□□□□ 0.89
C2CD3-213ENST00000539061 STAG3Q9UJ98 1225 aa20.59■□□□□ 0.89
C2CD3-213ENST00000539061 FAM200AQ8TCP9 573 aa20.59■□□□□ 0.89
C2CD3-213ENST00000539061 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
C2CD3-213ENST00000539061 OGFRQ9NZT2 677 aa20.59■□□□□ 0.89
C2CD3-213ENST00000539061 SYCP1Q15431 976 aa20.58■□□□□ 0.89
C2CD3-213ENST00000539061 CPS1P31327 1500 aa20.58■□□□□ 0.89
C2CD3-213ENST00000539061 LARP6Q9BRS8 491 aaKnown RBP20.58■□□□□ 0.88
C2CD3-213ENST00000539061 NUDT16Q96DE0 195 aaKnown RBP20.57■□□□□ 0.88
C2CD3-213ENST00000539061 MTMR6Q9Y217 621 aa20.57■□□□□ 0.88
C2CD3-213ENST00000539061 A0A0U1RQG5 324 aaPredicted RBP20.57■□□□□ 0.88
C2CD3-213ENST00000539061 PTGS1P23219 599 aa20.57■□□□□ 0.88
C2CD3-213ENST00000539061 RASEFQ8IZ41 740 aa20.57■□□□□ 0.88
C2CD3-213ENST00000539061 LSG1Q9H089 658 aaKnown RBP20.57■□□□□ 0.88
C2CD3-213ENST00000539061 IL1RAPL2Q9NP60 686 aa20.57■□□□□ 0.88
C2CD3-213ENST00000539061 LRRFIP2Q9Y608 721 aaKnown RBP20.57■□□□□ 0.88
C2CD3-213ENST00000539061 GJB2P29033 226 aa20.56■□□□□ 0.88
C2CD3-213ENST00000539061 CCDC61Q9Y6R9 512 aa20.56■□□□□ 0.88
C2CD3-213ENST00000539061 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
C2CD3-213ENST00000539061 NRKQ7Z2Y5 1582 aa20.56■□□□□ 0.88
C2CD3-213ENST00000539061 FLIIQ13045 1269 aa20.56■□□□□ 0.88
C2CD3-213ENST00000539061 NCBP1Q09161 790 aaKnown RBP20.55■□□□□ 0.88
C2CD3-213ENST00000539061 NUTM1Q86Y26 1132 aa20.55■□□□□ 0.88
C2CD3-213ENST00000539061 FBXO31Q5XUX0 539 aaPredicted RBP20.55■□□□□ 0.88
C2CD3-213ENST00000539061 SMTNL1A8MU46 457 aa20.55■□□□□ 0.88
C2CD3-213ENST00000539061 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
C2CD3-213ENST00000539061 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
C2CD3-213ENST00000539061 MAP4K4O95819 1239 aaPredicted RBP20.54■□□□□ 0.88
C2CD3-213ENST00000539061 MAP3K11Q16584 847 aa20.54■□□□□ 0.88
C2CD3-213ENST00000539061 CCDC83Q8IWF9 413 aa20.54■□□□□ 0.88
C2CD3-213ENST00000539061 ZSCAN31Q96LW9 406 aaPredicted RBP20.54■□□□□ 0.88
C2CD3-213ENST00000539061 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
C2CD3-213ENST00000539061 CASTP20810 708 aaKnown RBP20.54■□□□□ 0.88
C2CD3-213ENST00000539061 CNTROBQ8N137 903 aa20.54■□□□□ 0.88
C2CD3-213ENST00000539061 HYPKQ9NX55 129 aa20.54■□□□□ 0.88
C2CD3-213ENST00000539061 TAF3Q5VWG9 929 aa20.53■□□□□ 0.88
C2CD3-213ENST00000539061 CCDC186Q7Z3E2 898 aa20.53■□□□□ 0.88
C2CD3-213ENST00000539061 SH2B1Q9NRF2 756 aaPredicted RBP20.53■□□□□ 0.88
C2CD3-213ENST00000539061 LARGE1O95461 756 aa20.53■□□□□ 0.88
C2CD3-213ENST00000539061 CCDC30Q5VVM6 783 aa20.53■□□□□ 0.88
C2CD3-213ENST00000539061 PI4K2BQ8TCG2 481 aa20.53■□□□□ 0.88
C2CD3-213ENST00000539061 NUP62CLQ9H1M0 184 aa20.53■□□□□ 0.88
C2CD3-213ENST00000539061 TYRO3Q06418 890 aa20.52■□□□□ 0.88
C2CD3-213ENST00000539061 SSH3Q8TE77 659 aa20.52■□□□□ 0.88
C2CD3-213ENST00000539061 MRVI1Q9Y6F6 885 aa20.52■□□□□ 0.88
C2CD3-213ENST00000539061 NCKAP5LQ9HCH0 1330 aa20.52■□□□□ 0.88
C2CD3-213ENST00000539061 VPS37CA5D8V6 355 aaPredicted RBP20.52■□□□□ 0.87
C2CD3-213ENST00000539061 CTNNA3Q9UI47 895 aa20.52■□□□□ 0.87
C2CD3-213ENST00000539061 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
C2CD3-213ENST00000539061 VPS53Q5VIR6 699 aa20.51■□□□□ 0.87
C2CD3-213ENST00000539061 DRC7Q8IY82 874 aa20.51■□□□□ 0.87
C2CD3-213ENST00000539061 CGNQ9P2M7 1197 aaKnown RBP20.51■□□□□ 0.87
C2CD3-213ENST00000539061 PAXBP1Q9Y5B6 917 aa20.51■□□□□ 0.87
C2CD3-213ENST00000539061 LUZP1Q86V48 1076 aa20.51■□□□□ 0.87
C2CD3-213ENST00000539061 C16orf45Q96MC5 204 aaPredicted RBP20.51■□□□□ 0.87
C2CD3-213ENST00000539061 PDRG1Q9NUG6 133 aa20.51■□□□□ 0.87
C2CD3-213ENST00000539061 TNNT1P13805 278 aa20.5■□□□□ 0.87
C2CD3-213ENST00000539061 KRT85P78386 507 aa20.5■□□□□ 0.87
C2CD3-213ENST00000539061 GABPB1Q06547 395 aaPredicted RBP20.5■□□□□ 0.87
C2CD3-213ENST00000539061 ZNF771Q7L3S4 317 aaPredicted RBP20.5■□□□□ 0.87
C2CD3-213ENST00000539061 IGSF3O75054 1194 aa20.5■□□□□ 0.87
C2CD3-213ENST00000539061 SURF6O75683 361 aaKnown RBP20.5■□□□□ 0.87
C2CD3-213ENST00000539061 PDIA4P13667 645 aaKnown RBP20.5■□□□□ 0.87
C2CD3-213ENST00000539061 CPA1P15085 419 aa20.5■□□□□ 0.87
C2CD3-213ENST00000539061 USP44Q9H0E7 712 aa20.5■□□□□ 0.87
C2CD3-213ENST00000539061 MON2Q7Z3U7 1717 aa20.5■□□□□ 0.87
C2CD3-213ENST00000539061 FOXO3O43524 673 aa20.49■□□□□ 0.87
C2CD3-213ENST00000539061 HSP90AB2PQ58FF8 381 aa20.49■□□□□ 0.87
C2CD3-213ENST00000539061 CWC27Q6UX04 472 aaKnown RBP20.49■□□□□ 0.87
C2CD3-213ENST00000539061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.49■□□□□ 0.87
C2CD3-213ENST00000539061 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
C2CD3-213ENST00000539061 RHPN1Q8TCX5 695 aa20.49■□□□□ 0.87
C2CD3-213ENST00000539061 SPG7Q9UQ90 795 aa20.49■□□□□ 0.87
C2CD3-213ENST00000539061 ELP1O95163 1332 aa20.49■□□□□ 0.87
C2CD3-213ENST00000539061 LRMPQ12912 555 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 CAMK4Q16566 473 aa20.48■□□□□ 0.87
C2CD3-213ENST00000539061 TTC6Q86TZ1 520 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms