RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 RFC4P35249 363 aa13.73□□□□□ -0.21
PTPN6-212ENST00000539029 EIF4G2P78344 907 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPN6-212ENST00000539029 ITPK1Q13572 414 aa13.73□□□□□ -0.21
PTPN6-212ENST00000539029 CIAPIN1Q6FI81 312 aa13.73□□□□□ -0.21
PTPN6-212ENST00000539029 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
PTPN6-212ENST00000539029 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
PTPN6-212ENST00000539029 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
PTPN6-212ENST00000539029 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
PTPN6-212ENST00000539029 CTU1Q7Z7A3 348 aaKnown RBP13.72□□□□□ -0.21
PTPN6-212ENST00000539029 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
PTPN6-212ENST00000539029 EPHX2P34913 555 aa13.71□□□□□ -0.21
PTPN6-212ENST00000539029 DDR1Q08345 913 aa13.71□□□□□ -0.21
PTPN6-212ENST00000539029 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
PTPN6-212ENST00000539029 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
PTPN6-212ENST00000539029 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
PTPN6-212ENST00000539029 CST9Q5W186 159 aa13.69□□□□□ -0.22
PTPN6-212ENST00000539029 PIGBQ92521 554 aa13.69□□□□□ -0.22
PTPN6-212ENST00000539029 LTV1Q96GA3 475 aaPredicted RBP13.69□□□□□ -0.22
PTPN6-212ENST00000539029 ZEB1P37275 1124 aaPredicted RBP13.68□□□□□ -0.22
PTPN6-212ENST00000539029 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN6-212ENST00000539029 CEP290O15078 2479 aa13.68□□□□□ -0.22
PTPN6-212ENST00000539029 CGNL1Q0VF96 1302 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 LTBP3Q9NS15 1303 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
PTPN6-212ENST00000539029 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 HHIPL1Q96JK4 782 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 RGPD2P0DJD1 1756 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 SAPCD2Q86UD0 394 aa13.66□□□□□ -0.22
PTPN6-212ENST00000539029 SAGE1Q9NXZ1 904 aa13.66□□□□□ -0.22
PTPN6-212ENST00000539029 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
PTPN6-212ENST00000539029 FKBP8Q14318 412 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
PTPN6-212ENST00000539029 IP6K1Q92551 441 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 TAOK3Q9H2K8 898 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 INSRP06213 1382 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 NOGQ13253 232 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 RC3H1Q5TC82 1133 aaKnown RBP13.64□□□□□ -0.23
PTPN6-212ENST00000539029 COL25A1Q9BXS0 654 aaPredicted RBP13.64□□□□□ -0.23
PTPN6-212ENST00000539029 AKAP4Q5JQC9 854 aa13.63□□□□□ -0.23
PTPN6-212ENST00000539029 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
PTPN6-212ENST00000539029 C21orf2O43822 256 aa13.62□□□□□ -0.23
PTPN6-212ENST00000539029 RNF123Q5XPI4 1314 aa13.62□□□□□ -0.23
PTPN6-212ENST00000539029 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 TRAF5O00463 557 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 TM4SF1P30408 202 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 SLC12A5Q9H2X9 1139 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 SRP68Q9UHB9 627 aaKnown RBP13.61□□□□□ -0.23
PTPN6-212ENST00000539029 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 CNTNAP4Q9C0A0 1308 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 H0YIN7 160 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 ZNF541Q9H0D2 1346 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 USP42Q9H9J4 1324 aaKnown RBP13.6□□□□□ -0.23
PTPN6-212ENST00000539029 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
PTPN6-212ENST00000539029 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
PTPN6-212ENST00000539029 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 CYP27B1O15528 508 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 NRXN2Q9P2S2 1712 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 TRPA1O75762 1119 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
PTPN6-212ENST00000539029 HDGFL2Q7Z4V5 671 aaPredicted RBP13.58□□□□□ -0.24
PTPN6-212ENST00000539029 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 PRDM6Q9NQX0 595 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
PTPN6-212ENST00000539029 RNF186Q9NXI6 227 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 UNC80Q8N2C7 3258 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 KDRP35968 1356 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 SCN11AQ9UI33 1791 aa13.56□□□□□ -0.24
PTPN6-212ENST00000539029 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
PTPN6-212ENST00000539029 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
PTPN6-212ENST00000539029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPN6-212ENST00000539029 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
PTPN6-212ENST00000539029 KIAA0100Q14667 2235 aaKnown RBP13.55□□□□□ -0.24
PTPN6-212ENST00000539029 NME9Q86XW9 330 aa13.55□□□□□ -0.24
PTPN6-212ENST00000539029 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
PTPN6-212ENST00000539029 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN6-212ENST00000539029 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-212ENST00000539029 FBXO46Q6PJ61 603 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-212ENST00000539029 USHBP1Q8N6Y0 703 aa13.53□□□□□ -0.24
PTPN6-212ENST00000539029 RANBP2P49792 3224 aaKnown RBP13.53□□□□□ -0.24
PTPN6-212ENST00000539029 POTEFA5A3E0 1075 aa13.52□□□□□ -0.25
PTPN6-212ENST00000539029 HOXC9P31274 260 aa13.52□□□□□ -0.25
PTPN6-212ENST00000539029 GPC2Q8N158 579 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms