RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 LGR6Q9HBX8 967 aa12.04□□□□□ -0.48
SMAD3-203ENST00000537194 NMRK2Q9NPI5 230 aa12.04□□□□□ -0.48
SMAD3-203ENST00000537194 SOS1Q07889 1333 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-203ENST00000537194 COL15A1P39059 1388 aa12.04□□□□□ -0.48
SMAD3-203ENST00000537194 TJP1Q07157 1748 aa12.03□□□□□ -0.48
SMAD3-203ENST00000537194 NPHP1O15259 732 aa12.03□□□□□ -0.48
SMAD3-203ENST00000537194 CYP19A1P11511 503 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-203ENST00000537194 KCNA3P22001 575 aa12.03□□□□□ -0.48
SMAD3-203ENST00000537194 CHRNA5P30532 468 aa12.03□□□□□ -0.48
SMAD3-203ENST00000537194 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
SMAD3-203ENST00000537194 CC2D1BQ5T0F9 858 aaKnown RBP12.03□□□□□ -0.48
SMAD3-203ENST00000537194 TEX13AQ9BXU3 409 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-203ENST00000537194 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
SMAD3-203ENST00000537194 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
SMAD3-203ENST00000537194 H0YIN7 160 aa12.02□□□□□ -0.49
SMAD3-203ENST00000537194 U2SURPO15042 1029 aaKnown RBP12.02□□□□□ -0.49
SMAD3-203ENST00000537194 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
SMAD3-203ENST00000537194 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.49
SMAD3-203ENST00000537194 TTLL6Q8N841 843 aa12.02□□□□□ -0.49
SMAD3-203ENST00000537194 GAS2L2Q8NHY3 880 aa12.02□□□□□ -0.49
SMAD3-203ENST00000537194 SBF1O95248 1867 aa12.02□□□□□ -0.49
SMAD3-203ENST00000537194 SERPINB2P05120 415 aa12.01□□□□□ -0.49
SMAD3-203ENST00000537194 NFIXQ14938 502 aa12.01□□□□□ -0.49
SMAD3-203ENST00000537194 CFAP53Q96M91 514 aa12.01□□□□□ -0.49
SMAD3-203ENST00000537194 ZBTB1Q9Y2K1 713 aa12.01□□□□□ -0.49
SMAD3-203ENST00000537194 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-203ENST00000537194 KIF7Q2M1P5 1343 aa12.01□□□□□ -0.49
SMAD3-203ENST00000537194 AFDNP55196 1824 aaKnown RBP12□□□□□ -0.49
SMAD3-203ENST00000537194 GNAT3A8MTJ3 354 aa12□□□□□ -0.49
SMAD3-203ENST00000537194 LMNB1P20700 586 aa12□□□□□ -0.49
SMAD3-203ENST00000537194 C2CD5Q86YS7 1000 aa12□□□□□ -0.49
SMAD3-203ENST00000537194 SMC1BQ8NDV3 1235 aa12□□□□□ -0.49
SMAD3-203ENST00000537194 RRAGCQ9HB90 399 aa12□□□□□ -0.49
SMAD3-203ENST00000537194 MRC1P22897 1456 aa12□□□□□ -0.49
SMAD3-203ENST00000537194 PDE6BP35913 854 aa11.99□□□□□ -0.49
SMAD3-203ENST00000537194 CNGB1Q14028 1251 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-203ENST00000537194 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
SMAD3-203ENST00000537194 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
SMAD3-203ENST00000537194 KCPQ6ZWJ8 1503 aa11.99□□□□□ -0.49
SMAD3-203ENST00000537194 TNRC6CQ9HCJ0 1690 aaKnown RBP11.99□□□□□ -0.49
SMAD3-203ENST00000537194 CCDC88AQ3V6T2 1871 aa11.99□□□□□ -0.49
SMAD3-203ENST00000537194 VEGFAP15692 232 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-203ENST00000537194 ZNF622Q969S3 477 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMAD3-203ENST00000537194 FMNL2Q96PY5 1086 aa11.98□□□□□ -0.49
SMAD3-203ENST00000537194 NUDCQ9Y266 331 aa11.98□□□□□ -0.49
SMAD3-203ENST00000537194 WDR90Q96KV7 1748 aa11.97□□□□□ -0.49
SMAD3-203ENST00000537194 EIF5P55010 431 aaKnown RBP11.97□□□□□ -0.49
SMAD3-203ENST00000537194 ZNF790Q6PG37 636 aa11.97□□□□□ -0.49
SMAD3-203ENST00000537194 RTF1Q92541 710 aaKnown RBP11.97□□□□□ -0.49
SMAD3-203ENST00000537194 SETDB2Q96T68 719 aa11.97□□□□□ -0.49
SMAD3-203ENST00000537194 GLTPD2A6NH11 291 aa11.96□□□□□ -0.49
SMAD3-203ENST00000537194 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-203ENST00000537194 ST5P78524 1137 aa11.96□□□□□ -0.49
SMAD3-203ENST00000537194 RASSF7Q02833 373 aa11.96□□□□□ -0.49
SMAD3-203ENST00000537194 KLRG1Q96E93 195 aa11.96□□□□□ -0.49
SMAD3-203ENST00000537194 CARMIL3Q8ND23 1372 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 NPC1L1Q9UHC9 1359 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 HEG1Q9ULI3 1381 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 NRXN2Q9P2S2 1712 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 ADAMTS7Q9UKP4 1686 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 BTBD11A6QL63 1104 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 NEFMP07197 916 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 IL6STP40189 918 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-203ENST00000537194 SOGA3Q5TF21 947 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 CNKSR1Q969H4 720 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 ZNF496Q96IT1 587 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-203ENST00000537194 BRIP1Q9BX63 1249 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 DLEC1Q9Y238 1755 aa11.95□□□□□ -0.5
SMAD3-203ENST00000537194 TBC1D9BQ66K14 1250 aa11.94□□□□□ -0.5
SMAD3-203ENST00000537194 CNBD1Q8NA66 436 aa11.94□□□□□ -0.5
SMAD3-203ENST00000537194 TBC1D2BQ9UPU7 963 aa11.94□□□□□ -0.5
SMAD3-203ENST00000537194 ERFEQ4G0M1 354 aa11.93□□□□□ -0.5
SMAD3-203ENST00000537194 IL17REQ8NFR9 667 aa11.93□□□□□ -0.5
SMAD3-203ENST00000537194 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-203ENST00000537194 C21orf2O43822 256 aa11.92□□□□□ -0.5
SMAD3-203ENST00000537194 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
SMAD3-203ENST00000537194 DZIP3Q86Y13 1208 aaKnown RBP11.92□□□□□ -0.5
SMAD3-203ENST00000537194 TAOK3Q9H2K8 898 aa11.92□□□□□ -0.5
SMAD3-203ENST00000537194 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
SMAD3-203ENST00000537194 A1BGP04217 495 aa11.91□□□□□ -0.5
SMAD3-203ENST00000537194 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-203ENST00000537194 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMAD3-203ENST00000537194 STYK1Q6J9G0 422 aa11.91□□□□□ -0.5
SMAD3-203ENST00000537194 PRR5LQ6MZQ0 368 aa11.91□□□□□ -0.5
SMAD3-203ENST00000537194 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
SMAD3-203ENST00000537194 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-203ENST00000537194 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
SMAD3-203ENST00000537194 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
SMAD3-203ENST00000537194 SNRPA1P09661 255 aaKnown RBP11.9□□□□□ -0.5
SMAD3-203ENST00000537194 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-203ENST00000537194 HTRA3P83110 453 aa11.9□□□□□ -0.5
SMAD3-203ENST00000537194 TIAM2Q8IVF5 1701 aa11.9□□□□□ -0.5
SMAD3-203ENST00000537194 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.51
SMAD3-203ENST00000537194 NFKBIEO00221 500 aa11.89□□□□□ -0.51
SMAD3-203ENST00000537194 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
SMAD3-203ENST00000537194 SCN7AQ01118 1682 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms