RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 USP35Q9P2H5 1018 aa8.6□□□□□ -1.03
IFT88-207ENST00000537103 IBTKQ9P2D0 1353 aaPredicted RBP8.6□□□□□ -1.03
IFT88-207ENST00000537103 SEMA3EO15041 775 aa8.6□□□□□ -1.03
IFT88-207ENST00000537103 CABP4P57796 275 aa8.6□□□□□ -1.03
IFT88-207ENST00000537103 RC3H1Q5TC82 1133 aaKnown RBP8.6□□□□□ -1.03
IFT88-207ENST00000537103 UPF1Q92900 1129 aaKnown RBP eCLIP8.6□□□□□ -1.03
IFT88-207ENST00000537103 WDR70Q9NW82 654 aa8.6□□□□□ -1.03
IFT88-207ENST00000537103 TAF1LQ8IZX4 1826 aa8.59□□□□□ -1.03
IFT88-207ENST00000537103 SOCS7O14512 581 aa8.59□□□□□ -1.03
IFT88-207ENST00000537103 RBM25P49756 843 aaKnown RBP8.59□□□□□ -1.03
IFT88-207ENST00000537103 GNAI1P63096 354 aa8.59□□□□□ -1.03
IFT88-207ENST00000537103 RIPK4P57078 832 aa8.59□□□□□ -1.03
IFT88-207ENST00000537103 IL17REQ8NFR9 667 aa8.59□□□□□ -1.03
IFT88-207ENST00000537103 CNTNAP4Q9C0A0 1308 aa8.59□□□□□ -1.03
IFT88-207ENST00000537103 TRIM35Q9UPQ4 493 aa8.59□□□□□ -1.03
IFT88-207ENST00000537103 PALLDQ8WX93 1383 aa8.58□□□□□ -1.04
IFT88-207ENST00000537103 A0A0G2JS52 829 aa8.58□□□□□ -1.04
IFT88-207ENST00000537103 CHL1O00533 1208 aa8.58□□□□□ -1.04
IFT88-207ENST00000537103 TEFQ10587 303 aa8.58□□□□□ -1.04
IFT88-207ENST00000537103 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
IFT88-207ENST00000537103 FLAD1Q8NFF5 587 aa8.58□□□□□ -1.04
IFT88-207ENST00000537103 CAMKK2Q96RR4 588 aa8.58□□□□□ -1.04
IFT88-207ENST00000537103 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
IFT88-207ENST00000537103 CCDC184Q52MB2 194 aa8.57□□□□□ -1.04
IFT88-207ENST00000537103 PIGBQ92521 554 aa8.57□□□□□ -1.04
IFT88-207ENST00000537103 ZBED9Q6R2W3 1325 aa8.56□□□□□ -1.04
IFT88-207ENST00000537103 PRIM1P49642 420 aaKnown RBP8.56□□□□□ -1.04
IFT88-207ENST00000537103 FMNL2Q96PY5 1086 aa8.56□□□□□ -1.04
IFT88-207ENST00000537103 MYH16Q9H6N6 1097 aa8.56□□□□□ -1.04
IFT88-207ENST00000537103 ATG3Q9NT62 314 aa8.56□□□□□ -1.04
IFT88-207ENST00000537103 CASZ1Q86V15 1759 aa8.56□□□□□ -1.04
IFT88-207ENST00000537103 E9PSI1 815 aa8.56□□□□□ -1.04
IFT88-207ENST00000537103 WWC1Q8IX03 1113 aa8.56□□□□□ -1.04
IFT88-207ENST00000537103 APAF1O14727 1248 aa8.55□□□□□ -1.04
IFT88-207ENST00000537103 ZNF790Q6PG37 636 aa8.55□□□□□ -1.04
IFT88-207ENST00000537103 TRMT2AQ8IZ69 625 aaKnown RBP8.55□□□□□ -1.04
IFT88-207ENST00000537103 RNF39Q9H2S5 420 aa8.55□□□□□ -1.04
IFT88-207ENST00000537103 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
IFT88-207ENST00000537103 ILDR2Q71H61 639 aa8.55□□□□□ -1.04
IFT88-207ENST00000537103 TTC5Q8N0Z6 440 aa8.55□□□□□ -1.04
IFT88-207ENST00000537103 BTBD11A6QL63 1104 aa8.54□□□□□ -1.04
IFT88-207ENST00000537103 KDM4CQ9H3R0 1056 aa8.54□□□□□ -1.04
IFT88-207ENST00000537103 SCN7AQ01118 1682 aa8.54□□□□□ -1.04
IFT88-207ENST00000537103 BCORQ6W2J9 1755 aa8.54□□□□□ -1.04
IFT88-207ENST00000537103 A0A087WZG4 1122 aa8.54□□□□□ -1.04
IFT88-207ENST00000537103 APBA3O96018 575 aa8.54□□□□□ -1.04
IFT88-207ENST00000537103 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
IFT88-207ENST00000537103 HSP90B1P14625 803 aaKnown RBP8.54□□□□□ -1.04
IFT88-207ENST00000537103 LGR6Q9HBX8 967 aa8.54□□□□□ -1.04
IFT88-207ENST00000537103 LRP5O75197 1615 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 TRIM37O94972 964 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 EIF4A1P60842 406 aaKnown RBP8.53□□□□□ -1.04
IFT88-207ENST00000537103 NBPF14Q5TI25 921 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 UBR3Q6ZT12 1888 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 RIOK3O14730 519 aaKnown RBP8.53□□□□□ -1.04
IFT88-207ENST00000537103 SIK1P57059 783 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 TXNRD1Q16881 649 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 NFATC2IPQ8NCF5 419 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 AKT1S1Q96B36 256 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 CACNA1FO60840 1977 aa8.53□□□□□ -1.04
IFT88-207ENST00000537103 SSFA2P28290 1259 aa8.52□□□□□ -1.05
IFT88-207ENST00000537103 GOLGA2Q08379 1002 aa8.52□□□□□ -1.05
IFT88-207ENST00000537103 CCDC146Q8IYE0 955 aa8.52□□□□□ -1.05
IFT88-207ENST00000537103 STARD3NLO95772 234 aa8.52□□□□□ -1.05
IFT88-207ENST00000537103 SLFN5Q08AF3 891 aa8.51□□□□□ -1.05
IFT88-207ENST00000537103 CNGB1Q14028 1251 aaPredicted RBP8.51□□□□□ -1.05
IFT88-207ENST00000537103 FAM9BQ8IZU0 186 aa8.51□□□□□ -1.05
IFT88-207ENST00000537103 TSPYL4Q9UJ04 414 aa8.51□□□□□ -1.05
IFT88-207ENST00000537103 N4BP2Q86UW6 1770 aaPredicted RBP8.51□□□□□ -1.05
IFT88-207ENST00000537103 KCNQ2O43526 872 aa8.51□□□□□ -1.05
IFT88-207ENST00000537103 MCM10Q7L590 875 aa8.51□□□□□ -1.05
IFT88-207ENST00000537103 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
IFT88-207ENST00000537103 CCNL1Q9UK58 526 aaPredicted RBP8.51□□□□□ -1.05
IFT88-207ENST00000537103 TUBGCP6Q96RT7 1819 aa8.5□□□□□ -1.05
IFT88-207ENST00000537103 IL6STP40189 918 aaPredicted RBP8.5□□□□□ -1.05
IFT88-207ENST00000537103 RIC1Q4ADV7 1423 aa8.5□□□□□ -1.05
IFT88-207ENST00000537103 STK32BQ9NY57 414 aa8.5□□□□□ -1.05
IFT88-207ENST00000537103 GIGYF1O75420 1035 aaPredicted RBP8.5□□□□□ -1.05
IFT88-207ENST00000537103 RPS6KA4O75676 772 aa8.5□□□□□ -1.05
IFT88-207ENST00000537103 HMGB1P09429 215 aaKnown RBP8.5□□□□□ -1.05
IFT88-207ENST00000537103 TMCO4Q5TGY1 634 aa8.5□□□□□ -1.05
IFT88-207ENST00000537103 ACSBG1Q96GR2 724 aa8.5□□□□□ -1.05
IFT88-207ENST00000537103 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
IFT88-207ENST00000537103 CYP19A1P11511 503 aaPredicted RBP8.49□□□□□ -1.05
IFT88-207ENST00000537103 MFAP1P55081 439 aaKnown RBP8.49□□□□□ -1.05
IFT88-207ENST00000537103 ALDH1L2Q3SY69 923 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 ASAP1Q9ULH1 1129 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 PXDNLA1KZ92 1463 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 C4AP0C0L4 1744 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 RNF123Q5XPI4 1314 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 CCDC87Q9NVE4 849 aa8.49□□□□□ -1.05
IFT88-207ENST00000537103 ZBTB12Q9Y330 459 aaPredicted RBP8.48□□□□□ -1.05
IFT88-207ENST00000537103 FANCIQ9NVI1 1328 aa8.48□□□□□ -1.05
IFT88-207ENST00000537103 ERVV-1B6SEH8 477 aa8.48□□□□□ -1.05
IFT88-207ENST00000537103 ATP6V1AP38606 617 aa8.48□□□□□ -1.05
IFT88-207ENST00000537103 SLC15A2Q16348 729 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 2874.8 ms