RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
CDH20-202ENST00000536675 EPB41L2O43491 1005 aaKnown RBP17.4■□□□□ 0.38
CDH20-202ENST00000536675 FOXO3O43524 673 aa17.4■□□□□ 0.38
CDH20-202ENST00000536675 F13A1P00488 732 aa17.4■□□□□ 0.38
CDH20-202ENST00000536675 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
CDH20-202ENST00000536675 AK2P54819 239 aa17.4■□□□□ 0.38
CDH20-202ENST00000536675 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
CDH20-202ENST00000536675 AOX1Q06278 1338 aa17.39■□□□□ 0.38
CDH20-202ENST00000536675 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
CDH20-202ENST00000536675 RUFY3Q7L099 469 aa17.39■□□□□ 0.37
CDH20-202ENST00000536675 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
CDH20-202ENST00000536675 HSP90AB2PQ58FF8 381 aa17.39■□□□□ 0.37
CDH20-202ENST00000536675 NUTM1Q86Y26 1132 aa17.39■□□□□ 0.37
CDH20-202ENST00000536675 LRRFIP2Q9Y608 721 aaKnown RBP17.39■□□□□ 0.37
CDH20-202ENST00000536675 RAD50Q92878 1312 aa17.39■□□□□ 0.37
CDH20-202ENST00000536675 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
CDH20-202ENST00000536675 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
CDH20-202ENST00000536675 FLIIQ13045 1269 aa17.38■□□□□ 0.37
CDH20-202ENST00000536675 LIMCH1Q9UPQ0 1083 aa17.38■□□□□ 0.37
CDH20-202ENST00000536675 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
CDH20-202ENST00000536675 TXNDC2Q86VQ3 553 aa17.38■□□□□ 0.37
CDH20-202ENST00000536675 RASEFQ8IZ41 740 aa17.38■□□□□ 0.37
CDH20-202ENST00000536675 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
CDH20-202ENST00000536675 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
CDH20-202ENST00000536675 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.38■□□□□ 0.37
CDH20-202ENST00000536675 PDCL2Q8N4E4 241 aa17.37■□□□□ 0.37
CDH20-202ENST00000536675 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
CDH20-202ENST00000536675 SGSM2O43147 1006 aa17.37■□□□□ 0.37
CDH20-202ENST00000536675 ATP6V1DQ9Y5K8 247 aa17.37■□□□□ 0.37
CDH20-202ENST00000536675 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
CDH20-202ENST00000536675 GTPBP4Q9BZE4 634 aaKnown RBP17.36■□□□□ 0.37
CDH20-202ENST00000536675 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
CDH20-202ENST00000536675 DIAPH3Q9NSV4 1193 aa17.36■□□□□ 0.37
CDH20-202ENST00000536675 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
CDH20-202ENST00000536675 A2ML1A8K2U0 1454 aa17.36■□□□□ 0.37
CDH20-202ENST00000536675 DTNBO60941 627 aa17.36■□□□□ 0.37
CDH20-202ENST00000536675 LARGE1O95461 756 aa17.36■□□□□ 0.37
CDH20-202ENST00000536675 DNM1Q05193 864 aaKnown RBP17.36■□□□□ 0.37
CDH20-202ENST00000536675 RTF1Q92541 710 aaKnown RBP17.36■□□□□ 0.37
CDH20-202ENST00000536675 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
CDH20-202ENST00000536675 CACNA1FO60840 1977 aa17.35■□□□□ 0.37
CDH20-202ENST00000536675 TPM3P06753 285 aa17.35■□□□□ 0.37
CDH20-202ENST00000536675 CPA1P15085 419 aa17.35■□□□□ 0.37
CDH20-202ENST00000536675 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
CDH20-202ENST00000536675 PI4K2BQ8TCG2 481 aa17.35■□□□□ 0.37
CDH20-202ENST00000536675 ANKRD7Q92527 254 aa17.35■□□□□ 0.37
CDH20-202ENST00000536675 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
CDH20-202ENST00000536675 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
CDH20-202ENST00000536675 KLHL34Q8N239 644 aa17.34■□□□□ 0.37
CDH20-202ENST00000536675 PRR36Q9H6K5 1346 aa17.34■□□□□ 0.37
CDH20-202ENST00000536675 METP08581 1390 aa17.34■□□□□ 0.37
CDH20-202ENST00000536675 MTMR6Q9Y217 621 aa17.34■□□□□ 0.37
CDH20-202ENST00000536675 NRXN3Q9Y4C0 1643 aa17.34■□□□□ 0.37
CDH20-202ENST00000536675 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
CDH20-202ENST00000536675 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
CDH20-202ENST00000536675 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
CDH20-202ENST00000536675 CTIFO43310 598 aaKnown RBP17.33■□□□□ 0.36
CDH20-202ENST00000536675 GJB2P29033 226 aa17.33■□□□□ 0.36
CDH20-202ENST00000536675 CCDC83Q8IWF9 413 aa17.33■□□□□ 0.36
CDH20-202ENST00000536675 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
CDH20-202ENST00000536675 GOLGA6L6A8MZA4 724 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 CASTP20810 708 aaKnown RBP17.32■□□□□ 0.36
CDH20-202ENST00000536675 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 SSH3Q8TE77 659 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 SPATA31D1Q6ZQQ2 1576 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 CCDC192P0DO97 292 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 U2AF2P26368 475 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDH20-202ENST00000536675 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
CDH20-202ENST00000536675 UBTFL1P0CB47 393 aaPredicted RBP17.31■□□□□ 0.36
CDH20-202ENST00000536675 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
CDH20-202ENST00000536675 SOX12O15370 315 aa17.31■□□□□ 0.36
CDH20-202ENST00000536675 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
CDH20-202ENST00000536675 PTGS1P23219 599 aa17.31■□□□□ 0.36
CDH20-202ENST00000536675 CWC27Q6UX04 472 aaKnown RBP17.31■□□□□ 0.36
CDH20-202ENST00000536675 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
CDH20-202ENST00000536675 RAB11FIP3O75154 756 aa17.3■□□□□ 0.36
CDH20-202ENST00000536675 RHPN1Q8TCX5 695 aa17.3■□□□□ 0.36
CDH20-202ENST00000536675 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
CDH20-202ENST00000536675 PPP1R42Q7Z4L9 355 aa17.3■□□□□ 0.36
CDH20-202ENST00000536675 CNTROBQ8N137 903 aa17.3■□□□□ 0.36
CDH20-202ENST00000536675 KIF20AO95235 890 aa17.29■□□□□ 0.36
CDH20-202ENST00000536675 FAM200AQ8TCP9 573 aa17.29■□□□□ 0.36
CDH20-202ENST00000536675 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
CDH20-202ENST00000536675 ST3GAL1Q11201 340 aa17.28■□□□□ 0.36
CDH20-202ENST00000536675 PDRG1Q9NUG6 133 aa17.28■□□□□ 0.36
CDH20-202ENST00000536675 MRVI1Q9Y6F6 885 aa17.28■□□□□ 0.36
CDH20-202ENST00000536675 POLA2Q14181 598 aa17.28■□□□□ 0.36
CDH20-202ENST00000536675 PODXL2Q9NZ53 605 aa17.28■□□□□ 0.36
CDH20-202ENST00000536675 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
CDH20-202ENST00000536675 ADCK5Q3MIX3 580 aa17.27■□□□□ 0.36
CDH20-202ENST00000536675 LUZP1Q86V48 1076 aa17.27■□□□□ 0.36
CDH20-202ENST00000536675 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
CDH20-202ENST00000536675 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
CDH20-202ENST00000536675 TYRO3Q06418 890 aa17.27■□□□□ 0.36
CDH20-202ENST00000536675 VPS53Q5VIR6 699 aa17.27■□□□□ 0.36
CDH20-202ENST00000536675 TTC6Q86TZ1 520 aa17.27■□□□□ 0.36
CDH20-202ENST00000536675 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.36
CDH20-202ENST00000536675 ACEP12821 1306 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms