RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
CHD4-204ENST00000535810 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
CHD4-204ENST00000535810 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
CHD4-204ENST00000535810 MIER1Q8N108 512 aa11.82□□□□□ -0.52
CHD4-204ENST00000535810 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
CHD4-204ENST00000535810 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
CHD4-204ENST00000535810 CEMIPQ8WUJ3 1361 aa11.81□□□□□ -0.52
CHD4-204ENST00000535810 FCHSD2O94868 740 aa11.81□□□□□ -0.52
CHD4-204ENST00000535810 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
CHD4-204ENST00000535810 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
CHD4-204ENST00000535810 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
CHD4-204ENST00000535810 SIPA1L3O60292 1781 aaPredicted RBP11.8□□□□□ -0.52
CHD4-204ENST00000535810 UBR2Q8IWV8 1755 aa11.8□□□□□ -0.52
CHD4-204ENST00000535810 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
CHD4-204ENST00000535810 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
CHD4-204ENST00000535810 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
CHD4-204ENST00000535810 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
CHD4-204ENST00000535810 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
CHD4-204ENST00000535810 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
CHD4-204ENST00000535810 TEFQ10587 303 aa11.79□□□□□ -0.52
CHD4-204ENST00000535810 RALBP1Q15311 655 aa11.79□□□□□ -0.52
CHD4-204ENST00000535810 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
CHD4-204ENST00000535810 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
CHD4-204ENST00000535810 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD4-204ENST00000535810 RFC4P35249 363 aa11.78□□□□□ -0.52
CHD4-204ENST00000535810 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
CHD4-204ENST00000535810 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
CHD4-204ENST00000535810 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
CHD4-204ENST00000535810 MMP10P09238 476 aa11.77□□□□□ -0.53
CHD4-204ENST00000535810 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
CHD4-204ENST00000535810 GYS1P13807 737 aa11.77□□□□□ -0.53
CHD4-204ENST00000535810 ZNF790Q6PG37 636 aa11.77□□□□□ -0.53
CHD4-204ENST00000535810 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.53
CHD4-204ENST00000535810 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
CHD4-204ENST00000535810 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
CHD4-204ENST00000535810 MCM10Q7L590 875 aa11.76□□□□□ -0.53
CHD4-204ENST00000535810 NLGN1Q8N2Q7 840 aa11.76□□□□□ -0.53
CHD4-204ENST00000535810 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
CHD4-204ENST00000535810 ZBTB1Q9Y2K1 713 aa11.76□□□□□ -0.53
CHD4-204ENST00000535810 APLP1P51693 650 aa11.75□□□□□ -0.53
CHD4-204ENST00000535810 RTF1Q92541 710 aaKnown RBP11.75□□□□□ -0.53
CHD4-204ENST00000535810 PLEKHF1Q96S99 279 aa11.75□□□□□ -0.53
CHD4-204ENST00000535810 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
CHD4-204ENST00000535810 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
CHD4-204ENST00000535810 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
CHD4-204ENST00000535810 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
CHD4-204ENST00000535810 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
CHD4-204ENST00000535810 KCNQ3O43525 872 aa11.74□□□□□ -0.53
CHD4-204ENST00000535810 HTATSF1O43719 755 aaKnown RBP11.74□□□□□ -0.53
CHD4-204ENST00000535810 DCTN1Q14203 1278 aa11.74□□□□□ -0.53
CHD4-204ENST00000535810 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
CHD4-204ENST00000535810 COL15A1P39059 1388 aa11.74□□□□□ -0.53
CHD4-204ENST00000535810 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
CHD4-204ENST00000535810 ADCY9O60503 1353 aa11.73□□□□□ -0.53
CHD4-204ENST00000535810 STARD3NLO95772 234 aa11.73□□□□□ -0.53
CHD4-204ENST00000535810 NEFMP07197 916 aa11.73□□□□□ -0.53
CHD4-204ENST00000535810 DNAJC5GQ8N7S2 189 aa11.73□□□□□ -0.53
CHD4-204ENST00000535810 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
CHD4-204ENST00000535810 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
CHD4-204ENST00000535810 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
CHD4-204ENST00000535810 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
CHD4-204ENST00000535810 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
CHD4-204ENST00000535810 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
CHD4-204ENST00000535810 DLG5Q8TDM6 1919 aa11.72□□□□□ -0.53
CHD4-204ENST00000535810 PXDNLA1KZ92 1463 aa11.71□□□□□ -0.53
CHD4-204ENST00000535810 ZPR1O75312 459 aa11.71□□□□□ -0.53
CHD4-204ENST00000535810 CANXP27824 592 aaKnown RBP11.71□□□□□ -0.53
CHD4-204ENST00000535810 DDR1Q08345 913 aa11.71□□□□□ -0.53
CHD4-204ENST00000535810 NFE2L2Q16236 605 aa11.71□□□□□ -0.53
CHD4-204ENST00000535810 ZNF526Q8TF50 670 aaPredicted RBP11.71□□□□□ -0.53
CHD4-204ENST00000535810 TEX13AQ9BXU3 409 aaPredicted RBP11.71□□□□□ -0.53
CHD4-204ENST00000535810 NARFQ9UHQ1 456 aa11.71□□□□□ -0.53
CHD4-204ENST00000535810 PARP3Q9Y6F1 533 aa11.71□□□□□ -0.53
CHD4-204ENST00000535810 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
CHD4-204ENST00000535810 PCNTO95613 3336 aa11.7□□□□□ -0.54
CHD4-204ENST00000535810 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
CHD4-204ENST00000535810 PNNQ9H307 717 aaKnown RBP11.7□□□□□ -0.54
CHD4-204ENST00000535810 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
CHD4-204ENST00000535810 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
CHD4-204ENST00000535810 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
CHD4-204ENST00000535810 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
CHD4-204ENST00000535810 KIF3CO14782 793 aa11.69□□□□□ -0.54
CHD4-204ENST00000535810 PRELPP51888 382 aa11.69□□□□□ -0.54
CHD4-204ENST00000535810 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
CHD4-204ENST00000535810 COL13A1Q5TAT6 717 aaPredicted RBP11.69□□□□□ -0.54
CHD4-204ENST00000535810 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
CHD4-204ENST00000535810 WWC3Q9ULE0 1092 aa11.69□□□□□ -0.54
CHD4-204ENST00000535810 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 A0A087WZG4 1122 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 A1BGP04217 495 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
CHD4-204ENST00000535810 TM4SF1P30408 202 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 IL6STP40189 918 aaPredicted RBP11.68□□□□□ -0.54
CHD4-204ENST00000535810 TGFB2P61812 414 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 NFIXQ14938 502 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
CHD4-204ENST00000535810 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
CHD4-204ENST00000535810 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
CHD4-204ENST00000535810 N4BP2Q86UW6 1770 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms