RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 MMP10P09238 476 aa30.91■■■□□ 2.54
VPS37B-203ENST00000535765 RIPK4P57078 832 aa30.91■■■□□ 2.54
VPS37B-203ENST00000535765 GPR162Q16538 588 aa30.91■■■□□ 2.54
VPS37B-203ENST00000535765 PNISRQ8TF01 805 aaKnown RBP30.91■■■□□ 2.54
VPS37B-203ENST00000535765 GYS1P13807 737 aa30.9■■■□□ 2.54
VPS37B-203ENST00000535765 LMOD3Q0VAK6 560 aa30.9■■■□□ 2.54
VPS37B-203ENST00000535765 PELP1Q8IZL8 1130 aaKnown RBP30.9■■■□□ 2.54
VPS37B-203ENST00000535765 KDM3BQ7LBC6 1761 aa30.89■■■□□ 2.54
VPS37B-203ENST00000535765 KCNQ3O43525 872 aa30.88■■■□□ 2.53
VPS37B-203ENST00000535765 YY1P25490 414 aa30.87■■■□□ 2.53
VPS37B-203ENST00000535765 SRP68Q9UHB9 627 aaKnown RBP30.87■■■□□ 2.53
VPS37B-203ENST00000535765 ZBTB1Q9Y2K1 713 aa30.87■■■□□ 2.53
VPS37B-203ENST00000535765 SOS1Q07889 1333 aaPredicted RBP30.87■■■□□ 2.53
VPS37B-203ENST00000535765 CCDC146Q8IYE0 955 aa30.86■■■□□ 2.53
VPS37B-203ENST00000535765 USP42Q9H9J4 1324 aaKnown RBP30.86■■■□□ 2.53
VPS37B-203ENST00000535765 ZPR1O75312 459 aa30.84■■■□□ 2.53
VPS37B-203ENST00000535765 CANXP27824 592 aaKnown RBP30.84■■■□□ 2.53
VPS37B-203ENST00000535765 SNRPA1P09661 255 aaKnown RBP30.83■■■□□ 2.53
VPS37B-203ENST00000535765 BABAM1Q9NWV8 329 aa30.83■■■□□ 2.53
VPS37B-203ENST00000535765 PARP3Q9Y6F1 533 aa30.82■■■□□ 2.52
VPS37B-203ENST00000535765 FKBP8Q14318 412 aa30.81■■■□□ 2.52
VPS37B-203ENST00000535765 CCDC184Q52MB2 194 aa30.81■■■□□ 2.52
VPS37B-203ENST00000535765 THUMPD2Q9BTF0 503 aaKnown RBP30.81■■■□□ 2.52
VPS37B-203ENST00000535765 COL15A1P39059 1388 aa30.8■■■□□ 2.52
VPS37B-203ENST00000535765 EIF5P55010 431 aaKnown RBP30.79■■■□□ 2.52
VPS37B-203ENST00000535765 USPL1Q5W0Q7 1092 aa30.79■■■□□ 2.52
VPS37B-203ENST00000535765 MIS18AQ9NYP9 233 aa30.79■■■□□ 2.52
VPS37B-203ENST00000535765 NARFQ9UHQ1 456 aa30.78■■■□□ 2.52
VPS37B-203ENST00000535765 USP16Q9Y5T5 823 aa30.78■■■□□ 2.52
VPS37B-203ENST00000535765 LAMB4A4D0S4 1761 aa30.77■■■□□ 2.52
VPS37B-203ENST00000535765 IL6STP40189 918 aaPredicted RBP30.77■■■□□ 2.52
VPS37B-203ENST00000535765 TRIM35Q9UPQ4 493 aa30.77■■■□□ 2.52
VPS37B-203ENST00000535765 RRP7AQ9Y3A4 280 aaKnown RBP30.77■■■□□ 2.52
VPS37B-203ENST00000535765 A0A087WZG4 1122 aa30.76■■■□□ 2.51
VPS37B-203ENST00000535765 NEUROD2Q15784 382 aa30.76■■■□□ 2.51
VPS37B-203ENST00000535765 ZNF330Q9Y3S2 320 aaPredicted RBP30.76■■■□□ 2.51
VPS37B-203ENST00000535765 YBX3P16989 372 aaKnown RBP eCLIP30.75■■■□□ 2.51
VPS37B-203ENST00000535765 EIF4A1P60842 406 aaKnown RBP30.75■■■□□ 2.51
VPS37B-203ENST00000535765 GRIN3BO60391 1043 aa30.74■■■□□ 2.51
VPS37B-203ENST00000535765 A1BGP04217 495 aa30.74■■■□□ 2.51
VPS37B-203ENST00000535765 NPM2Q86SE8 214 aaKnown RBP30.74■■■□□ 2.51
VPS37B-203ENST00000535765 MRS2Q9HD23 443 aa30.74■■■□□ 2.51
VPS37B-203ENST00000535765 KIF13BQ9NQT8 1826 aa30.73■■■□□ 2.51
VPS37B-203ENST00000535765 PRAMEF22A3QJZ6 481 aa30.72■■■□□ 2.51
VPS37B-203ENST00000535765 GIGYF1O75420 1035 aaPredicted RBP30.72■■■□□ 2.51
VPS37B-203ENST00000535765 TSPYL4Q9UJ04 414 aa30.72■■■□□ 2.51
VPS37B-203ENST00000535765 APAF1O14727 1248 aa30.71■■■□□ 2.51
VPS37B-203ENST00000535765 DDR1Q08345 913 aa30.71■■■□□ 2.51
VPS37B-203ENST00000535765 WWC3Q9ULE0 1092 aa30.71■■■□□ 2.51
VPS37B-203ENST00000535765 C10orf71Q711Q0 1435 aa30.71■■■□□ 2.51
VPS37B-203ENST00000535765 TM4SF1P30408 202 aa30.7■■■□□ 2.51
VPS37B-203ENST00000535765 TGFB2P61812 414 aa30.7■■■□□ 2.51
VPS37B-203ENST00000535765 CHL1O00533 1208 aa30.69■■■□□ 2.5
VPS37B-203ENST00000535765 BCL2L12Q9HB09 334 aa30.69■■■□□ 2.5
VPS37B-203ENST00000535765 POLRMTO00411 1230 aaKnown RBP30.67■■■□□ 2.5
VPS37B-203ENST00000535765 NFIXQ14938 502 aa30.67■■■□□ 2.5
VPS37B-203ENST00000535765 TBC1D2BQ9UPU7 963 aa30.67■■■□□ 2.5
VPS37B-203ENST00000535765 SCN7AQ01118 1682 aa30.66■■■□□ 2.5
VPS37B-203ENST00000535765 NCBP3Q53F19 620 aaKnown RBP30.66■■■□□ 2.5
VPS37B-203ENST00000535765 PXDNLA1KZ92 1463 aa30.65■■■□□ 2.5
VPS37B-203ENST00000535765 A0A0G2JLW4 131 aa30.65■■■□□ 2.5
VPS37B-203ENST00000535765 PIP4K2AP48426 406 aaPredicted RBP30.65■■■□□ 2.5
VPS37B-203ENST00000535765 CFAP44Q96MT7 982 aa30.64■■■□□ 2.5
VPS37B-203ENST00000535765 BCORQ6W2J9 1755 aa30.64■■■□□ 2.49
VPS37B-203ENST00000535765 NBPF26B4DH59 902 aa30.63■■■□□ 2.49
VPS37B-203ENST00000535765 CALD1Q05682 793 aaKnown RBP30.63■■■□□ 2.49
VPS37B-203ENST00000535765 NBPF10Q6P3W6 841 aaKnown RBP30.63■■■□□ 2.49
VPS37B-203ENST00000535765 NBPF15Q8N660 670 aa30.63■■■□□ 2.49
VPS37B-203ENST00000535765 AFDNP55196 1824 aaKnown RBP30.62■■■□□ 2.49
VPS37B-203ENST00000535765 RGL2O15211 777 aa30.62■■■□□ 2.49
VPS37B-203ENST00000535765 DPEP1P16444 411 aa30.62■■■□□ 2.49
VPS37B-203ENST00000535765 BICDL1Q6ZP65 573 aa30.62■■■□□ 2.49
VPS37B-203ENST00000535765 NRXN2Q9P2S2 1712 aa30.61■■■□□ 2.49
VPS37B-203ENST00000535765 DZIP3Q86Y13 1208 aaKnown RBP30.61■■■□□ 2.49
VPS37B-203ENST00000535765 ERBB4Q15303 1308 aa30.61■■■□□ 2.49
VPS37B-203ENST00000535765 UTRNP46939 3433 aa30.6■■■□□ 2.49
VPS37B-203ENST00000535765 GOLGB1Q14789 3259 aaKnown RBP30.6■■■□□ 2.49
VPS37B-203ENST00000535765 CCDC27Q2M243 656 aa30.6■■■□□ 2.49
VPS37B-203ENST00000535765 SERPINB2P05120 415 aa30.59■■■□□ 2.49
VPS37B-203ENST00000535765 ZNF853P0CG23 659 aa30.59■■■□□ 2.49
VPS37B-203ENST00000535765 CHD4Q14839 1912 aa30.58■■■□□ 2.49
VPS37B-203ENST00000535765 CAMTA2O94983 1202 aa30.58■■■□□ 2.49
VPS37B-203ENST00000535765 TBC1D9BQ66K14 1250 aa30.58■■■□□ 2.49
VPS37B-203ENST00000535765 CLEC4GQ6UXB4 293 aa30.58■■■□□ 2.49
VPS37B-203ENST00000535765 KIAA1551Q9HCM1 1747 aa30.58■■■□□ 2.49
VPS37B-203ENST00000535765 IFT57Q9NWB7 429 aa30.57■■■□□ 2.48
VPS37B-203ENST00000535765 BCS1LQ9Y276 419 aa30.57■■■□□ 2.48
VPS37B-203ENST00000535765 GNAI1P63096 354 aa30.56■■■□□ 2.48
VPS37B-203ENST00000535765 LAS1LQ9Y4W2 734 aaKnown RBP30.56■■■□□ 2.48
VPS37B-203ENST00000535765 ZNF784Q8NCA9 323 aaPredicted RBP30.55■■■□□ 2.48
VPS37B-203ENST00000535765 HOXB7P09629 217 aa30.54■■■□□ 2.48
VPS37B-203ENST00000535765 N4BP2Q86UW6 1770 aaPredicted RBP30.54■■■□□ 2.48
VPS37B-203ENST00000535765 SETDB2Q96T68 719 aa30.53■■■□□ 2.48
VPS37B-203ENST00000535765 PIM2Q9P1W9 311 aa30.53■■■□□ 2.48
VPS37B-203ENST00000535765 KCNA3P22001 575 aa30.52■■■□□ 2.48
VPS37B-203ENST00000535765 CHRNA5P30532 468 aa30.52■■■□□ 2.48
VPS37B-203ENST00000535765 MBIPQ9NS73 344 aa30.52■■■□□ 2.48
VPS37B-203ENST00000535765 ZNF652Q9Y2D9 606 aa30.52■■■□□ 2.48
VPS37B-203ENST00000535765 BRCA1P38398 1863 aaKnown RBP30.52■■■□□ 2.48
VPS37B-203ENST00000535765 CARMIL3Q8ND23 1372 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms