RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SMIM5Q71RC9 77 aa15.71■□□□□ 0.11
CHD4-203ENST00000535717 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
CHD4-203ENST00000535717 PNPLA7Q6ZV29 1317 aa15.7■□□□□ 0.1
CHD4-203ENST00000535717 GNPATO15228 680 aa15.7■□□□□ 0.1
CHD4-203ENST00000535717 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
CHD4-203ENST00000535717 PDGFDQ9GZP0 370 aaPredicted RBP15.7■□□□□ 0.1
CHD4-203ENST00000535717 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
CHD4-203ENST00000535717 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
CHD4-203ENST00000535717 QSER1Q2KHR3 1735 aa15.69■□□□□ 0.1
CHD4-203ENST00000535717 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
CHD4-203ENST00000535717 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
CHD4-203ENST00000535717 RPS6KA4O75676 772 aa15.68■□□□□ 0.1
CHD4-203ENST00000535717 ZBTB1Q9Y2K1 713 aa15.68■□□□□ 0.1
CHD4-203ENST00000535717 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
CHD4-203ENST00000535717 CASZ1Q86V15 1759 aa15.67■□□□□ 0.1
CHD4-203ENST00000535717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
CHD4-203ENST00000535717 PHF14O94880 888 aa15.67■□□□□ 0.1
CHD4-203ENST00000535717 A1BGP04217 495 aa15.67■□□□□ 0.1
CHD4-203ENST00000535717 SSFA2P28290 1259 aa15.67■□□□□ 0.1
CHD4-203ENST00000535717 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
CHD4-203ENST00000535717 CANXP27824 592 aaKnown RBP15.66■□□□□ 0.1
CHD4-203ENST00000535717 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHD4-203ENST00000535717 FLAD1Q8NFF5 587 aa15.66■□□□□ 0.1
CHD4-203ENST00000535717 LAMB4A4D0S4 1761 aa15.66■□□□□ 0.1
CHD4-203ENST00000535717 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
CHD4-203ENST00000535717 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
CHD4-203ENST00000535717 PIP4K2AP48426 406 aaPredicted RBP15.65■□□□□ 0.1
CHD4-203ENST00000535717 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
CHD4-203ENST00000535717 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
CHD4-203ENST00000535717 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
CHD4-203ENST00000535717 C8orf58Q8NAV2 365 aa15.65■□□□□ 0.1
CHD4-203ENST00000535717 NBPF26B4DH59 902 aa15.64■□□□□ 0.09
CHD4-203ENST00000535717 MSH5O43196 834 aa15.64■□□□□ 0.09
CHD4-203ENST00000535717 ADRA2BP18089 450 aa15.64■□□□□ 0.09
CHD4-203ENST00000535717 EIF2S2P20042 333 aaKnown RBP15.64■□□□□ 0.09
CHD4-203ENST00000535717 NBPF10Q6P3W6 841 aaKnown RBP15.64■□□□□ 0.09
CHD4-203ENST00000535717 NBPF15Q8N660 670 aa15.64■□□□□ 0.09
CHD4-203ENST00000535717 ARHGEF1Q92888 912 aaKnown RBP15.64■□□□□ 0.09
CHD4-203ENST00000535717 MYH16Q9H6N6 1097 aa15.64■□□□□ 0.09
CHD4-203ENST00000535717 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
CHD4-203ENST00000535717 HOXB7P09629 217 aa15.63■□□□□ 0.09
CHD4-203ENST00000535717 IL6STP40189 918 aaPredicted RBP15.63■□□□□ 0.09
CHD4-203ENST00000535717 EIF5P55010 431 aaKnown RBP15.63■□□□□ 0.09
CHD4-203ENST00000535717 TSPYL6Q8N831 410 aa15.63■□□□□ 0.09
CHD4-203ENST00000535717 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
CHD4-203ENST00000535717 SRCAPQ6ZRS2 3230 aa15.63■□□□□ 0.09
CHD4-203ENST00000535717 E9PSI1 815 aa15.62■□□□□ 0.09
CHD4-203ENST00000535717 ZBTB7AO95365 584 aa15.62■□□□□ 0.09
CHD4-203ENST00000535717 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
CHD4-203ENST00000535717 NECTIN2Q92692 538 aa15.62■□□□□ 0.09
CHD4-203ENST00000535717 COL15A1P39059 1388 aa15.62■□□□□ 0.09
CHD4-203ENST00000535717 C4AP0C0L4 1744 aa15.61■□□□□ 0.09
CHD4-203ENST00000535717 RFC4P35249 363 aa15.61■□□□□ 0.09
CHD4-203ENST00000535717 EXOSC9Q06265 439 aaKnown RBP15.61■□□□□ 0.09
CHD4-203ENST00000535717 HDGFL1Q5TGJ6 251 aa15.61■□□□□ 0.09
CHD4-203ENST00000535717 SLC16A10Q8TF71 515 aa15.61■□□□□ 0.09
CHD4-203ENST00000535717 ZNF330Q9Y3S2 320 aaPredicted RBP15.61■□□□□ 0.09
CHD4-203ENST00000535717 PDIA6Q15084 440 aa15.6■□□□□ 0.09
CHD4-203ENST00000535717 MTFR1LQ9H019 292 aa15.6■□□□□ 0.09
CHD4-203ENST00000535717 SRP68Q9UHB9 627 aaKnown RBP15.6■□□□□ 0.09
CHD4-203ENST00000535717 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
CHD4-203ENST00000535717 ERBB4Q15303 1308 aa15.6■□□□□ 0.09
CHD4-203ENST00000535717 MYL6BP14649 208 aa15.59■□□□□ 0.09
CHD4-203ENST00000535717 PROSER3Q2NL68 480 aa15.59■□□□□ 0.09
CHD4-203ENST00000535717 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
CHD4-203ENST00000535717 TRMT2AQ8IZ69 625 aaKnown RBP15.59■□□□□ 0.09
CHD4-203ENST00000535717 USP42Q9H9J4 1324 aaKnown RBP15.59■□□□□ 0.09
CHD4-203ENST00000535717 A0A087WZG4 1122 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 ANXA1P04083 346 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 MSL1Q68DK7 614 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 LRP10Q7Z4F1 713 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 NARFQ9UHQ1 456 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 TBC1D2BQ9UPU7 963 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
CHD4-203ENST00000535717 ZPR1O75312 459 aa15.57■□□□□ 0.08
CHD4-203ENST00000535717 GYS1P13807 737 aa15.57■□□□□ 0.08
CHD4-203ENST00000535717 USPL1Q5W0Q7 1092 aa15.57■□□□□ 0.08
CHD4-203ENST00000535717 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
CHD4-203ENST00000535717 SPON1Q9HCB6 807 aa15.57■□□□□ 0.08
CHD4-203ENST00000535717 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
CHD4-203ENST00000535717 VAMP4O75379 141 aa15.56■□□□□ 0.08
CHD4-203ENST00000535717 PTGER2P43116 358 aa15.56■□□□□ 0.08
CHD4-203ENST00000535717 DZIP3Q86Y13 1208 aaKnown RBP15.56■□□□□ 0.08
CHD4-203ENST00000535717 ARXQ96QS3 562 aa15.56■□□□□ 0.08
CHD4-203ENST00000535717 DBF4Q9UBU7 674 aaPredicted RBP15.56■□□□□ 0.08
CHD4-203ENST00000535717 COL24A1Q17RW2 1714 aa15.55■□□□□ 0.08
CHD4-203ENST00000535717 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
CHD4-203ENST00000535717 FKBP8Q14318 412 aa15.55■□□□□ 0.08
CHD4-203ENST00000535717 CCDC30Q5VVM6 783 aa15.55■□□□□ 0.08
CHD4-203ENST00000535717 TTLL7Q6ZT98 887 aa15.55■□□□□ 0.08
CHD4-203ENST00000535717 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
CHD4-203ENST00000535717 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
CHD4-203ENST00000535717 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
CHD4-203ENST00000535717 NLGN1Q8N2Q7 840 aa15.54■□□□□ 0.08
CHD4-203ENST00000535717 CHMP4AQ9BY43 222 aa15.54■□□□□ 0.08
CHD4-203ENST00000535717 COPS6Q7L5N1 327 aa15.53■□□□□ 0.08
CHD4-203ENST00000535717 XAGE3Q8WTP9 111 aa15.53■□□□□ 0.08
CHD4-203ENST00000535717 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
CHD4-203ENST00000535717 SCN7AQ01118 1682 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms