RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZSCAN18Q8TBC5 510 aaPredicted RBP2.79□□□□□ -1.96
COPB1-212ENST00000534771 SPIRE2Q8WWL2 714 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 MEGF10Q96KG7 1140 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 WASLO00401 505 aaPredicted RBP2.78□□□□□ -1.96
COPB1-212ENST00000534771 IGLV1-40P01703 118 aa2.78□□□□□ -1.96
COPB1-212ENST00000534771 PHKA2P46019 1235 aa2.78□□□□□ -1.96
COPB1-212ENST00000534771 CCDC102AQ96A19 550 aa2.78□□□□□ -1.96
COPB1-212ENST00000534771 GRIP2Q9C0E4 1043 aa2.78□□□□□ -1.96
COPB1-212ENST00000534771 PRR12Q9ULL5 1215 aa2.78□□□□□ -1.96
COPB1-212ENST00000534771 MOXD2PA6NHM9 499 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 SPATA31C2B4DYI2 1134 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 F12P00748 615 aaPredicted RBP2.77□□□□□ -1.97
COPB1-212ENST00000534771 RAB15P59190 212 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 RAC1P63000 192 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 LBRQ14739 615 aaKnown RBP2.77□□□□□ -1.97
COPB1-212ENST00000534771 TMEM132AQ24JP5 1023 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 EFHC2Q5JST6 749 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 SH3BP5LQ7L8J4 393 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 CILP2Q8IUL8 1156 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 RELTQ969Z4 430 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 NLRP3Q96P20 1036 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 PRDM6Q9NQX0 595 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 STARD13Q9Y3M8 1113 aa2.77□□□□□ -1.97
COPB1-212ENST00000534771 A0A1W2PRU2 124 aa2.76□□□□□ -1.97
COPB1-212ENST00000534771 INHBBP09529 407 aa2.76□□□□□ -1.97
COPB1-212ENST00000534771 CD33P20138 364 aa2.76□□□□□ -1.97
COPB1-212ENST00000534771 PLCB2Q00722 1185 aa2.76□□□□□ -1.97
COPB1-212ENST00000534771 DIXDC1Q155Q3 683 aa2.76□□□□□ -1.97
COPB1-212ENST00000534771 C1QL4Q86Z23 238 aa2.76□□□□□ -1.97
COPB1-212ENST00000534771 LRRC56Q8IYG6 542 aaPredicted RBP2.76□□□□□ -1.97
COPB1-212ENST00000534771 ACSS3Q9H6R3 686 aa2.76□□□□□ -1.97
COPB1-212ENST00000534771 GSC2O15499 205 aa2.75□□□□□ -1.97
COPB1-212ENST00000534771 ALBP02768 609 aa2.75□□□□□ -1.97
COPB1-212ENST00000534771 GJA5P36382 358 aa2.75□□□□□ -1.97
COPB1-212ENST00000534771 ARMC2Q8NEN0 867 aa2.75□□□□□ -1.97
COPB1-212ENST00000534771 MYRFLQ96LU7 910 aa2.75□□□□□ -1.97
COPB1-212ENST00000534771 BEGAINQ9BUH8 593 aa2.75□□□□□ -1.97
COPB1-212ENST00000534771 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.75□□□□□ -1.97
COPB1-212ENST00000534771 CFAP99D6REC4 459 aa2.74□□□□□ -1.97
COPB1-212ENST00000534771 HRCP23327 699 aa2.74□□□□□ -1.97
COPB1-212ENST00000534771 TTLL12Q14166 644 aaPredicted RBP2.74□□□□□ -1.97
COPB1-212ENST00000534771 ZNF468Q5VIY5 522 aaPredicted RBP2.74□□□□□ -1.97
COPB1-212ENST00000534771 C20orf173Q96LM9 149 aa2.74□□□□□ -1.97
COPB1-212ENST00000534771 ZBTB3Q9H5J0 574 aa2.74□□□□□ -1.97
COPB1-212ENST00000534771 PCDHB15Q9Y5E8 787 aa2.74□□□□□ -1.97
COPB1-212ENST00000534771 A0A1B0GTH6 734 aa2.73□□□□□ -1.97
COPB1-212ENST00000534771 PRR19A6NJB7 356 aa2.73□□□□□ -1.97
COPB1-212ENST00000534771 MSX1P28360 303 aa2.73□□□□□ -1.97
COPB1-212ENST00000534771 GRNP28799 593 aaKnown RBP2.73□□□□□ -1.97
COPB1-212ENST00000534771 HAP1P54257 671 aaPredicted RBP2.73□□□□□ -1.97
COPB1-212ENST00000534771 COL19A1Q14993 1142 aa2.73□□□□□ -1.97
COPB1-212ENST00000534771 RSBN1LQ6PCB5 846 aaPredicted RBP2.73□□□□□ -1.97
COPB1-212ENST00000534771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.73□□□□□ -1.97
COPB1-212ENST00000534771 TBC1D2Q9BYX2 928 aa2.73□□□□□ -1.97
COPB1-212ENST00000534771 ZCCHC2Q9C0B9 1178 aaKnown RBP2.73□□□□□ -1.97
COPB1-212ENST00000534771 CDV3Q9UKY7 258 aaKnown RBP2.73□□□□□ -1.97
COPB1-212ENST00000534771 HCN2Q9UL51 889 aa2.73□□□□□ -1.97
COPB1-212ENST00000534771 ANGEL1Q9UNK9 670 aaKnown RBP2.73□□□□□ -1.97
COPB1-212ENST00000534771 PCDHGC4Q9Y5F7 938 aa2.73□□□□□ -1.97
COPB1-212ENST00000534771 ERVH48-1M5A8F1 160 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 PAPLNO95428 1278 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 RAP1GAPP47736 663 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 KRTAP10-2P60368 255 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 CARMIL2Q6F5E8 1435 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 TP53INP2Q8IXH6 220 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 SLC10A4Q96EP9 437 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 CRELD1Q96HD1 420 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 CYLDQ9NQC7 956 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 STOML1Q9UBI4 398 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 RAXQ9Y2V3 346 aa2.72□□□□□ -1.97
COPB1-212ENST00000534771 NUTM2BA6NNL0 878 aaPredicted RBP2.71□□□□□ -1.98
COPB1-212ENST00000534771 NUTM2EB1AL46 878 aaPredicted RBP2.71□□□□□ -1.98
COPB1-212ENST00000534771 PER1O15534 1290 aaPredicted RBP2.71□□□□□ -1.98
COPB1-212ENST00000534771 AMHR2Q16671 573 aa2.71□□□□□ -1.98
COPB1-212ENST00000534771 CSPP1Q1MSJ5 1256 aa2.71□□□□□ -1.98
COPB1-212ENST00000534771 FAM182BQ5T319 152 aa2.71□□□□□ -1.98
COPB1-212ENST00000534771 NUTM2DQ5VT03 806 aaPredicted RBP2.71□□□□□ -1.98
COPB1-212ENST00000534771 NUTM2AQ8IVF1 878 aaPredicted RBP2.71□□□□□ -1.98
COPB1-212ENST00000534771 TSC1Q92574 1164 aa2.71□□□□□ -1.98
COPB1-212ENST00000534771 ATXN7O15265 892 aaPredicted RBP2.7□□□□□ -1.98
COPB1-212ENST00000534771 FOXD2O60548 495 aaPredicted RBP2.7□□□□□ -1.98
COPB1-212ENST00000534771 ZMYND10O75800 440 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 MAPTP10636 758 aaKnown RBP2.7□□□□□ -1.98
COPB1-212ENST00000534771 HOXA5P20719 270 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 FIGNL1Q6PIW4 674 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 BARGINQ6ZT62 677 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 DZIP1LQ8IYY4 767 aaKnown RBP2.7□□□□□ -1.98
COPB1-212ENST00000534771 FMR1NBQ8N0W7 255 aaPredicted RBP2.7□□□□□ -1.98
COPB1-212ENST00000534771 CABLES1Q8TDN4 633 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 ZIC5Q96T25 663 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 MDFIQ99750 246 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 FAM53CQ9NYF3 392 aa2.7□□□□□ -1.98
COPB1-212ENST00000534771 DCDC2BA2VCK2 349 aa2.69□□□□□ -1.98
COPB1-212ENST00000534771 TNP2Q05952 138 aa2.69□□□□□ -1.98
COPB1-212ENST00000534771 TUSC1Q2TAM9 212 aa2.69□□□□□ -1.98
COPB1-212ENST00000534771 SYT9Q86SS6 491 aa2.69□□□□□ -1.98
COPB1-212ENST00000534771 ZBTB33Q86T24 672 aa2.69□□□□□ -1.98
COPB1-212ENST00000534771 DMRTC2Q8IXT2 367 aaPredicted RBP2.69□□□□□ -1.98
COPB1-212ENST00000534771 HELBQ8NG08 1087 aaPredicted RBP2.69□□□□□ -1.98
COPB1-212ENST00000534771 GPKOWQ92917 476 aaPredicted RBP eCLIP2.69□□□□□ -1.984e-7■□□□□ 11.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms