RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 SMAP1Q8IYB5 467 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-216ENST00000534765 MEIS3Q99687 375 aa11.14□□□□□ -0.63
SF3B2-216ENST00000534765 HAP1P54257 671 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-216ENST00000534765 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
SF3B2-216ENST00000534765 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
SF3B2-216ENST00000534765 RNMTO43148 476 aaKnown RBP11.13□□□□□ -0.63
SF3B2-216ENST00000534765 RTF1Q92541 710 aaKnown RBP11.13□□□□□ -0.63
SF3B2-216ENST00000534765 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
SF3B2-216ENST00000534765 LMOD3Q0VAK6 560 aa11.13□□□□□ -0.63
SF3B2-216ENST00000534765 MCM4P33991 863 aa11.13□□□□□ -0.63
SF3B2-216ENST00000534765 TNNT3P45378 269 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-216ENST00000534765 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-216ENST00000534765 APPP05067 770 aa11.12□□□□□ -0.63
SF3B2-216ENST00000534765 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
SF3B2-216ENST00000534765 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-216ENST00000534765 CPDO75976 1380 aa11.11□□□□□ -0.63
SF3B2-216ENST00000534765 SRCAPQ6ZRS2 3230 aa11.11□□□□□ -0.63
SF3B2-216ENST00000534765 ZNF830Q96NB3 372 aaPredicted RBP11.11□□□□□ -0.63
SF3B2-216ENST00000534765 AKAP4Q5JQC9 854 aa11.11□□□□□ -0.63
SF3B2-216ENST00000534765 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
SF3B2-216ENST00000534765 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
SF3B2-216ENST00000534765 FAM177BA6PVY3 158 aa11.1□□□□□ -0.63
SF3B2-216ENST00000534765 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
SF3B2-216ENST00000534765 NASPP49321 788 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-216ENST00000534765 C16orf71Q8IYS4 520 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-216ENST00000534765 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-216ENST00000534765 PHKG2P15735 406 aa11.1□□□□□ -0.63
SF3B2-216ENST00000534765 HEG1Q9ULI3 1381 aa11.1□□□□□ -0.63
SF3B2-216ENST00000534765 PLCB2Q00722 1185 aa11.1□□□□□ -0.63
SF3B2-216ENST00000534765 N4BP2Q86UW6 1770 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-216ENST00000534765 STRN4Q9NRL3 753 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
SF3B2-216ENST00000534765 PDIA6Q15084 440 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 ZSCAN30Q86W11 494 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 TSC1Q92574 1164 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 ZBTB9Q96C00 473 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 KCNJ4P48050 445 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 ARHGAP45Q92619 1136 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 DDX19BQ9UMR2 479 aa11.09□□□□□ -0.63
SF3B2-216ENST00000534765 INTS3Q68E01 1043 aaKnown RBP11.08□□□□□ -0.64
SF3B2-216ENST00000534765 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
SF3B2-216ENST00000534765 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
SF3B2-216ENST00000534765 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
SF3B2-216ENST00000534765 FLIIQ13045 1269 aa11.08□□□□□ -0.64
SF3B2-216ENST00000534765 HSP90AB1P08238 724 aaKnown RBP11.08□□□□□ -0.64
SF3B2-216ENST00000534765 GOLGA6L22H0YM25 854 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 HDAC1Q13547 482 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-216ENST00000534765 PRDM11Q9NQV5 511 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 ADCY9O60503 1353 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 HSCBQ8IWL3 235 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 SMC5Q8IY18 1101 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 LNPKQ9C0E8 428 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-216ENST00000534765 OVOS2A0A0G2JMS6 1433 aa11.07□□□□□ -0.64
SF3B2-216ENST00000534765 SMARCA5O60264 1052 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-216ENST00000534765 MTERF4Q7Z6M4 381 aaKnown RBP11.07□□□□□ -0.64
SF3B2-216ENST00000534765 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-216ENST00000534765 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
SF3B2-216ENST00000534765 WDR17Q8IZU2 1322 aa11.06□□□□□ -0.64
SF3B2-216ENST00000534765 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
SF3B2-216ENST00000534765 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-216ENST00000534765 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-216ENST00000534765 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
SF3B2-216ENST00000534765 ZNF496Q96IT1 587 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-216ENST00000534765 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 CEP85Q6P2H3 762 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 PLCH1Q4KWH8 1693 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 PARP4Q9UKK3 1724 aaKnown RBP11.05□□□□□ -0.64
SF3B2-216ENST00000534765 MRC1P22897 1456 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 UBR2Q8IWV8 1755 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 PHLPP1O60346 1717 aa11.05□□□□□ -0.64
SF3B2-216ENST00000534765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-216ENST00000534765 IPO8O15397 1037 aaKnown RBP11.04□□□□□ -0.64
SF3B2-216ENST00000534765 NBPF7P0C2Y1 421 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-216ENST00000534765 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
SF3B2-216ENST00000534765 ITGB4P16144 1822 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 ERICH4A6NGS2 130 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 OFD1O75665 1012 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 TOM1L2Q6ZVM7 507 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 SLC52A2Q9HAB3 445 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 PAPPAQ13219 1627 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 AHDC1Q5TGY3 1603 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-216ENST00000534765 COL22A1Q8NFW1 1626 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-216ENST00000534765 NUCB1Q02818 461 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 TSHZ3Q63HK5 1081 aa11.04□□□□□ -0.64
SF3B2-216ENST00000534765 APBB1O00213 710 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 DMTNQ08495 405 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 FKBP5Q13451 457 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-216ENST00000534765 JARID2Q92833 1246 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-216ENST00000534765 TUBGCP6Q96RT7 1819 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms