RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 SPON1Q9HCB6 807 aa12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 EMILIN3Q9NT22 766 aa12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 PHKG2P15735 406 aa12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 IL13P35225 146 aa12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 TMOD3Q9NYL9 352 aa12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-219ENST00000534753 LRP5O75197 1615 aa12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 PKD1L3Q7Z443 1732 aa12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 U2SURPO15042 1029 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 PIGBQ92521 554 aa12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
CCDC90B-219ENST00000534753 MLLT3P42568 568 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-219ENST00000534753 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
CCDC90B-219ENST00000534753 PALLDQ8WX93 1383 aa12.03□□□□□ -0.48
CCDC90B-219ENST00000534753 DPYSL4O14531 572 aa12.02□□□□□ -0.49
CCDC90B-219ENST00000534753 AMOTQ4VCS5 1084 aa12.02□□□□□ -0.49
CCDC90B-219ENST00000534753 IER5LQ5T953 404 aa12.02□□□□□ -0.49
CCDC90B-219ENST00000534753 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
CCDC90B-219ENST00000534753 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
CCDC90B-219ENST00000534753 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
CCDC90B-219ENST00000534753 TOGARAM1Q9Y4F4 1720 aa12.02□□□□□ -0.49
CCDC90B-219ENST00000534753 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
CCDC90B-219ENST00000534753 PLCG2P16885 1265 aa12.01□□□□□ -0.49
CCDC90B-219ENST00000534753 CABP4P57796 275 aa12.01□□□□□ -0.49
CCDC90B-219ENST00000534753 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-219ENST00000534753 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-219ENST00000534753 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
CCDC90B-219ENST00000534753 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-219ENST00000534753 ITGB4P16144 1822 aa12□□□□□ -0.49
CCDC90B-219ENST00000534753 HSP90AB1P08238 724 aaKnown RBP12□□□□□ -0.49
CCDC90B-219ENST00000534753 POTEGQ6S5H5 508 aa12□□□□□ -0.49
CCDC90B-219ENST00000534753 DCAF5Q96JK2 942 aa12□□□□□ -0.49
CCDC90B-219ENST00000534753 CFAP53Q96M91 514 aa12□□□□□ -0.49
CCDC90B-219ENST00000534753 MTFR1LQ9H019 292 aa11.99□□□□□ -0.49
CCDC90B-219ENST00000534753 NPC1L1Q9UHC9 1359 aa11.99□□□□□ -0.49
CCDC90B-219ENST00000534753 LY75O60449 1722 aa11.99□□□□□ -0.49
CCDC90B-219ENST00000534753 CASZ1Q86V15 1759 aa11.99□□□□□ -0.49
CCDC90B-219ENST00000534753 PAPPAQ13219 1627 aa11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 PHF14O94880 888 aa11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 ATP6V1AP38606 617 aa11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 FOXK1P85037 733 aa11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 AK7Q96M32 723 aa11.98□□□□□ -0.49
CCDC90B-219ENST00000534753 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 SIK1P57059 783 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 MSL1Q68DK7 614 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 TMEM92Q6UXU6 159 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 SMIM5Q71RC9 77 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 NFATC2IPQ8NCF5 419 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 ATG3Q9NT62 314 aa11.97□□□□□ -0.49
CCDC90B-219ENST00000534753 KDM6AO15550 1401 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 KDRP35968 1356 aa11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 G3V3G9 751 aa11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 KIF3CO14782 793 aa11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 PTCD1O75127 700 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 PTGER2P43116 358 aa11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 MTHFSDQ2M296 383 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 COL23A1Q86Y22 540 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
CCDC90B-219ENST00000534753 C5P01031 1676 aa11.95□□□□□ -0.5
CCDC90B-219ENST00000534753 U2AF1L5P0DN76 240 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-219ENST00000534753 POLD1P28340 1107 aa11.95□□□□□ -0.5
CCDC90B-219ENST00000534753 U2AF1Q01081 240 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC90B-219ENST00000534753 AKAP4Q5JQC9 854 aa11.95□□□□□ -0.5
CCDC90B-219ENST00000534753 LINC00116Q8NCU8 138 aa11.95□□□□□ -0.5
CCDC90B-219ENST00000534753 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
CCDC90B-219ENST00000534753 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
CCDC90B-219ENST00000534753 ITPK1Q13572 414 aa11.94□□□□□ -0.5
CCDC90B-219ENST00000534753 ARXQ96QS3 562 aa11.94□□□□□ -0.5
CCDC90B-219ENST00000534753 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-219ENST00000534753 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-219ENST00000534753 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
CCDC90B-219ENST00000534753 GNPATO15228 680 aa11.93□□□□□ -0.5
CCDC90B-219ENST00000534753 SEC24BO95487 1268 aa11.93□□□□□ -0.5
CCDC90B-219ENST00000534753 PRKAR2BP31323 418 aa11.93□□□□□ -0.5
CCDC90B-219ENST00000534753 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
CCDC90B-219ENST00000534753 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
CCDC90B-219ENST00000534753 C4BP0C0L5 1744 aa11.92□□□□□ -0.5
CCDC90B-219ENST00000534753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-219ENST00000534753 RNMTO43148 476 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-219ENST00000534753 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-219ENST00000534753 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
CCDC90B-219ENST00000534753 SLC16A10Q8TF71 515 aa11.92□□□□□ -0.5
CCDC90B-219ENST00000534753 TAF1LQ8IZX4 1826 aa11.91□□□□□ -0.5
CCDC90B-219ENST00000534753 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms