RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TMEM88BA6NKF7 163 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 CDK2AP1O14519 115 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 SPINT1O43278 529 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 TATP17735 454 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-216ENST00000534389 GPC1P35052 558 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 CTSOP43234 321 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-216ENST00000534389 PSMA6P60900 246 aaKnown RBP4.6□□□□□ -1.67
CSDE1-216ENST00000534389 TAS1R3Q7RTX0 852 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 LYSMD3Q7Z3D4 306 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 PGBD3Q8N328 593 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 GAS2L2Q8NHY3 880 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 RHBDD1Q8TEB9 315 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 ZFP42Q96MM3 310 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 CXXC1Q9P0U4 656 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-216ENST00000534389 SCHIP1Q9P0W5 487 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-216ENST00000534389 BIN2Q9UBW5 565 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-216ENST00000534389 PARP3Q9Y6F1 533 aa4.6□□□□□ -1.67
CSDE1-216ENST00000534389 POTECB2RU33 542 aa4.59□□□□□ -1.67
CSDE1-216ENST00000534389 FOXO3O43524 673 aa4.59□□□□□ -1.67
CSDE1-216ENST00000534389 PTCD1O75127 700 aaKnown RBP4.59□□□□□ -1.67
CSDE1-216ENST00000534389 IGFBP4P22692 258 aa4.59□□□□□ -1.67
CSDE1-216ENST00000534389 RNF144AP50876 292 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-216ENST00000534389 NAA30Q147X3 362 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-216ENST00000534389 ARSJQ5FYB0 599 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-216ENST00000534389 KDF1Q8NAX2 398 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-216ENST00000534389 SLC4A9Q96Q91 983 aa4.59□□□□□ -1.67
CSDE1-216ENST00000534389 SENP2Q9HC62 589 aa4.59□□□□□ -1.67
CSDE1-216ENST00000534389 HCN4Q9Y3Q4 1203 aa4.59□□□□□ -1.67
CSDE1-216ENST00000534389 CLSPNQ9HAW4 1339 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 RHOQP17081 205 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 SSFA2P28290 1259 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 POU4F2Q12837 409 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.58□□□□□ -1.681e-30■□□□□ 8
CSDE1-216ENST00000534389 RIPOR1Q6ZS17 1223 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 GLYCTKQ8IVS8 523 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 TTC16Q8NEE8 873 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 L3MBTL2Q969R5 705 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 KIFC2Q96AC6 838 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 TRIM47Q96LD4 638 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 GAS2L1Q99501 681 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-216ENST00000534389 TIMMDC1Q9NPL8 285 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 IVNS1ABPQ9Y6Y0 642 aa4.58□□□□□ -1.68
CSDE1-216ENST00000534389 C11orf95C9JLR9 678 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-216ENST00000534389 DKK1O94907 266 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 SNRPBP14678 240 aaKnown RBP4.57□□□□□ -1.68
CSDE1-216ENST00000534389 WEE1P30291 646 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 NOS2P35228 1153 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 FAM69CQ0P6D2 419 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 FKBP5Q13451 457 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-216ENST00000534389 RNF217Q8TC41 542 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 RHPN1Q8TCX5 695 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 UBE2Q2Q8WVN8 375 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 CCDC136Q96JN2 1154 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 GZF1Q9H116 711 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-216ENST00000534389 ANO2Q9NQ90 1003 aa4.57□□□□□ -1.68
CSDE1-216ENST00000534389 SOS2Q07890 1332 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-216ENST00000534389 SOBPA7XYQ1 873 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 MTFR1Q15390 333 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 HIF1AQ16665 826 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 C4orf17Q53FE4 359 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 TMCO4Q5TGY1 634 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 ZNF787Q6DD87 383 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 NBPF10Q6P3W6 841 aaKnown RBP4.56□□□□□ -1.68
CSDE1-216ENST00000534389 GPAMQ9HCL2 828 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 PODXL2Q9NZ53 605 aa4.56□□□□□ -1.68
CSDE1-216ENST00000534389 H3BRB1 525 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 DEKP35659 375 aaKnown RBP4.55□□□□□ -1.68
CSDE1-216ENST00000534389 EPHA4P54764 986 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 FOXK2Q01167 660 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 ZNF211Q13398 564 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-216ENST00000534389 TEAD4Q15561 434 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 FOXD4L5Q5VV16 416 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-216ENST00000534389 C16orf46Q6P387 395 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 ALDH16A1Q8IZ83 802 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 TMC1Q8TDI8 760 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 GTF3C2Q8WUA4 911 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-216ENST00000534389 C2orf49Q9BVC5 232 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-216ENST00000534389 PHACTR1Q9C0D0 580 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 FHDC1Q9C0D6 1143 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-216ENST00000534389 GRIP2Q9C0E4 1043 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 TUT1Q9H6E5 874 aaKnown RBP4.55□□□□□ -1.68
CSDE1-216ENST00000534389 DNMT3LQ9UJW3 386 aa4.55□□□□□ -1.68
CSDE1-216ENST00000534389 A0A1B0GTH6 734 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 SCNN1AP37088 669 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 SERPINB4P48594 390 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 DGKZQ13574 1117 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 OCLNQ16625 522 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 EFHC2Q5JST6 749 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 C1orf216Q8TAB5 229 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 ANKIB1Q9P2G1 1089 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 SEPT3Q9UH03 358 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 USP3Q9Y6I4 520 aa4.54□□□□□ -1.68
CSDE1-216ENST00000534389 EML1O00423 815 aa4.53□□□□□ -1.68
CSDE1-216ENST00000534389 C21orf2O43822 256 aa4.53□□□□□ -1.68
CSDE1-216ENST00000534389 PCSK2P16519 638 aa4.53□□□□□ -1.68
CSDE1-216ENST00000534389 BRD2P25440 801 aaKnown RBP4.53□□□□□ -1.68
CSDE1-216ENST00000534389 TXLNAP40222 546 aa4.53□□□□□ -1.68
CSDE1-216ENST00000534389 FKBP4Q02790 459 aaKnown RBP eCLIP4.53□□□□□ -1.68
CSDE1-216ENST00000534389 SF3B2Q13435 895 aaKnown RBP4.53□□□□□ -1.68
CSDE1-216ENST00000534389 RTN1Q16799 776 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms