RNA–Protein interactions for RNA: ENST00000534317.1

PDE3B-205, Transcript of phosphodiesterase 3B, humanhuman

TSL 1 (best)

Gene PDE3B, Length 5,521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-205ENST00000534317 CLIP2Q9UDT6 1046 aa21.74■■□□□ 1.07
PDE3B-205ENST00000534317 ZNF213O14771 459 aa21.74■■□□□ 1.07
PDE3B-205ENST00000534317 GUCY1B3Q02153 619 aa21.73■■□□□ 1.07
PDE3B-205ENST00000534317 SCAF11Q99590 1463 aaKnown RBP21.73■■□□□ 1.07
PDE3B-205ENST00000534317 TOP1P11387 765 aaKnown RBP21.73■■□□□ 1.07
PDE3B-205ENST00000534317 SPA17Q15506 151 aa21.73■■□□□ 1.07
PDE3B-205ENST00000534317 KLHL10Q6JEL2 608 aa21.73■■□□□ 1.07
PDE3B-205ENST00000534317 DDX19AQ9NUU7 478 aaKnown RBP21.73■■□□□ 1.07
PDE3B-205ENST00000534317 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
PDE3B-205ENST00000534317 ANKRD62A6NC57 917 aa21.73■■□□□ 1.07
PDE3B-205ENST00000534317 JAKMIP3Q5VZ66 844 aa21.73■■□□□ 1.07
PDE3B-205ENST00000534317 MPRIPQ6WCQ1 1025 aa21.73■■□□□ 1.07
PDE3B-205ENST00000534317 CTCFLQ8NI51 663 aaPredicted RBP21.73■■□□□ 1.07
PDE3B-205ENST00000534317 ECHDC1Q9NTX5 307 aa21.72■■□□□ 1.07
PDE3B-205ENST00000534317 MAP3K1Q13233 1512 aa21.72■■□□□ 1.07
PDE3B-205ENST00000534317 FAM135AQ9P2D6 1515 aa21.72■■□□□ 1.07
PDE3B-205ENST00000534317 KRI1Q8N9T8 703 aaKnown RBP21.72■■□□□ 1.07
PDE3B-205ENST00000534317 SLC12A7Q9Y666 1083 aa21.72■■□□□ 1.07
PDE3B-205ENST00000534317 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
PDE3B-205ENST00000534317 MKNK2Q9HBH9 465 aa21.72■■□□□ 1.07
PDE3B-205ENST00000534317 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
PDE3B-205ENST00000534317 PPP1R12BO60237 982 aaPredicted RBP21.72■■□□□ 1.07
PDE3B-205ENST00000534317 KIF5CO60282 957 aa21.71■■□□□ 1.07
PDE3B-205ENST00000534317 POLR3DP05423 398 aaPredicted RBP21.71■■□□□ 1.07
PDE3B-205ENST00000534317 FKBP15Q5T1M5 1219 aa21.71■■□□□ 1.07
PDE3B-205ENST00000534317 USP25Q9UHP3 1055 aa21.71■■□□□ 1.07
PDE3B-205ENST00000534317 CKAP2LQ8IYA6 745 aa21.71■■□□□ 1.07
PDE3B-205ENST00000534317 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
PDE3B-205ENST00000534317 PPP1R1BQ9UD71 204 aaPredicted RBP21.7■■□□□ 1.06
PDE3B-205ENST00000534317 CRACR2AQ9BSW2 395 aa21.7■■□□□ 1.06
PDE3B-205ENST00000534317 HSP90AB3PQ58FF7 597 aa21.7■■□□□ 1.06
PDE3B-205ENST00000534317 IQCA1Q86XH1 822 aa21.7■■□□□ 1.06
PDE3B-205ENST00000534317 TTC21BQ7Z4L5 1316 aa21.7■■□□□ 1.06
PDE3B-205ENST00000534317 GOLGA8BA8MQT2 603 aa21.7■■□□□ 1.06
PDE3B-205ENST00000534317 RNF41Q9H4P4 317 aaPredicted RBP21.7■■□□□ 1.06
PDE3B-205ENST00000534317 IL16Q14005 1332 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 A0A087WZG4 1122 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 SLC5A1P13866 664 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 PHF8Q9UPP1 1060 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 KIF14Q15058 1648 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 STX6O43752 255 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 GJB2P29033 226 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 MPHOSPH10O00566 681 aaKnown RBP21.69■■□□□ 1.06
PDE3B-205ENST00000534317 URI1O94763 535 aaPredicted RBP21.69■■□□□ 1.06
PDE3B-205ENST00000534317 CASQ1P31415 396 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 SSRP1Q08945 709 aaKnown RBP21.69■■□□□ 1.06
PDE3B-205ENST00000534317 FSIP1Q8NA03 581 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 TBC1D32Q96NH3 1257 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 TSG101Q99816 390 aa21.69■■□□□ 1.06
PDE3B-205ENST00000534317 GOLGA8AA7E2F4 631 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 IGHDP01880 384 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 TMOD2Q9NZR1 351 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 CNNM3Q8NE01 707 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 NEMFO60524 1076 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 TTC22Q5TAA0 569 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 RANBP6O60518 1105 aaKnown RBP21.68■■□□□ 1.06
PDE3B-205ENST00000534317 KIF4BQ2VIQ3 1234 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 CCDC82Q8N4S0 544 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 MBIPQ9NS73 344 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 PLB1Q6P1J6 1458 aa21.68■■□□□ 1.06
PDE3B-205ENST00000534317 CCT2P78371 535 aaKnown RBP21.67■■□□□ 1.06
PDE3B-205ENST00000534317 TRMT112Q9UI30 125 aaKnown RBP21.67■■□□□ 1.06
PDE3B-205ENST00000534317 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
PDE3B-205ENST00000534317 CD109Q6YHK3 1445 aa21.67■■□□□ 1.06
PDE3B-205ENST00000534317 IFIT3O14879 490 aaKnown RBP21.67■■□□□ 1.06
PDE3B-205ENST00000534317 LARP6Q9BRS8 491 aaKnown RBP21.67■■□□□ 1.06
PDE3B-205ENST00000534317 GDPD2Q9HCC8 539 aa21.67■■□□□ 1.06
PDE3B-205ENST00000534317 ANKRD18BA2A2Z9 1011 aa21.67■■□□□ 1.06
PDE3B-205ENST00000534317 BAG4O95429 457 aaKnown RBP21.66■■□□□ 1.06
PDE3B-205ENST00000534317 DZIP1Q86YF9 867 aaKnown RBP21.66■■□□□ 1.06
PDE3B-205ENST00000534317 ADGRL1O94910 1474 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 MATR3P43243 847 aaKnown RBP eCLIP21.66■■□□□ 1.062e-6■■□□□ 12.6
PDE3B-205ENST00000534317 CACNA2D4Q7Z3S7 1137 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 ERICH4A6NGS2 130 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 DESP17661 470 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 SF3B2Q13435 895 aaKnown RBP21.66■■□□□ 1.06
PDE3B-205ENST00000534317 RAB34Q9BZG1 259 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 MAP3K2Q9Y2U5 619 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 PLCD4Q9BRC7 762 aa21.66■■□□□ 1.06
PDE3B-205ENST00000534317 MAP9Q49MG5 647 aa21.65■■□□□ 1.06
PDE3B-205ENST00000534317 TNNT1P13805 278 aa21.65■■□□□ 1.06
PDE3B-205ENST00000534317 USP8P40818 1118 aa21.65■■□□□ 1.06
PDE3B-205ENST00000534317 IDI1Q13907 227 aa21.65■■□□□ 1.06
PDE3B-205ENST00000534317 TFIP11Q9UBB9 837 aaKnown RBP21.65■■□□□ 1.06
PDE3B-205ENST00000534317 AMOTL2Q9Y2J4 779 aa21.65■■□□□ 1.06
PDE3B-205ENST00000534317 FGFR1OPO95684 399 aaKnown RBP21.65■■□□□ 1.06
PDE3B-205ENST00000534317 GSDMDP57764 484 aa21.64■■□□□ 1.06
PDE3B-205ENST00000534317 STX1AQ16623 288 aa21.64■■□□□ 1.06
PDE3B-205ENST00000534317 NOS1P29475 1434 aa21.64■■□□□ 1.06
PDE3B-205ENST00000534317 POTEJP0CG39 1038 aa21.64■■□□□ 1.05
PDE3B-205ENST00000534317 ZNF444Q8N0Y2 327 aaPredicted RBP21.64■■□□□ 1.05
PDE3B-205ENST00000534317 ZPR1O75312 459 aa21.64■■□□□ 1.05
PDE3B-205ENST00000534317 GBP2P32456 591 aaPredicted RBP21.64■■□□□ 1.05
PDE3B-205ENST00000534317 PIK3R4Q99570 1358 aa21.64■■□□□ 1.05
PDE3B-205ENST00000534317 SSR1P43307 286 aaKnown RBP21.64■■□□□ 1.05
PDE3B-205ENST00000534317 TNIP1Q15025 636 aa21.64■■□□□ 1.05
PDE3B-205ENST00000534317 CRACR2BQ8N4Y2 399 aaPredicted RBP21.64■■□□□ 1.05
PDE3B-205ENST00000534317 C14orf93Q9H972 538 aaKnown RBP21.64■■□□□ 1.05
PDE3B-205ENST00000534317 CCDC194A0A1B0GVG4 234 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms