RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 MICALCLQ6ZW33 695 aa14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 CFAP100Q494V2 611 aa14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 CCAR1Q8IX12 1150 aaKnown RBP14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 GNAT3A8MTJ3 354 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 ZNF428Q96B54 188 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 TRERF1Q96PN7 1200 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 TBC1D2Q9BYX2 928 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 BTBD11A6QL63 1104 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 SCAND2PQ9GZW5 306 aaPredicted RBP14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 POLR3GO15318 223 aaPredicted RBP14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 ANKRD24Q8TF21 1146 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 TNPO1Q92973 898 aaKnown RBP14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 ANO10Q9NW15 660 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
AMBRA1-212ENST00000534300 RAD21O60216 631 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 CCT4P50991 539 aaKnown RBP14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 SYCP1Q15431 976 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 MPRIPQ6WCQ1 1025 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 NPHP4O75161 1426 aaPredicted RBP14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 TRIM22Q8IYM9 498 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 ARHGEF10O15013 1369 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 CDK5RAP3Q96JB5 506 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 USP25Q9UHP3 1055 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 TBC1D2BQ9UPU7 963 aa14.14□□□□□ -0.15
AMBRA1-212ENST00000534300 POLD1P28340 1107 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 NSD2O96028 1365 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 KRT32Q14532 448 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 STK3Q13188 491 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 UVSSAQ2YD98 709 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 RPAP2Q8IXW5 612 aaPredicted RBP14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■■■■ 110.2
AMBRA1-212ENST00000534300 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 KIF5CO60282 957 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 KRT222Q8N1A0 295 aa14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 DNAJC2Q99543 621 aaKnown RBP14.13□□□□□ -0.15
AMBRA1-212ENST00000534300 A0A087WZG4 1122 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 IMMTQ16891 758 aaKnown RBP14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 PAXBP1Q9Y5B6 917 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 ZNF772Q68DY9 489 aaPredicted RBP14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 GPATCH11Q8N954 259 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 C16orf45Q96MC5 204 aaPredicted RBP14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 CLIP2Q9UDT6 1046 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 KIF4BQ2VIQ3 1234 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 GSDMDP57764 484 aa14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 IPO4Q8TEX9 1081 aaKnown RBP14.12□□□□□ -0.15
AMBRA1-212ENST00000534300 KIAA1328Q86T90 577 aa14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 GNL3LQ9NVN8 582 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 TAF4BQ92750 862 aa14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 TSR2Q969E8 191 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 PUS7Q96PZ0 661 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 GTPBP4Q9BZE4 634 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 CCDC184Q52MB2 194 aa14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 ZCRB1Q8TBF4 217 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 JAKMIP1Q96N16 626 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-212ENST00000534300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.11□□□□□ -0.157e-8■□□□□ 8.2
AMBRA1-212ENST00000534300 RPRD2Q5VT52 1461 aaKnown RBP14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 CTAGE5O15320 804 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 PTCD1O75127 700 aaKnown RBP14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 CASQ1P31415 396 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 CDKL5O76039 1030 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 SSFA2P28290 1259 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 PLEKHH1Q9ULM0 1364 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 BAG6P46379 1132 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 ANKRD62A6NC57 917 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 SLFN5Q08AF3 891 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 USP21Q9UK80 565 aa14.1□□□□□ -0.15
AMBRA1-212ENST00000534300 CAVIN2O95810 425 aa14.09□□□□□ -0.15
AMBRA1-212ENST00000534300 CCDC83Q8IWF9 413 aa14.09□□□□□ -0.15
AMBRA1-212ENST00000534300 CFAP43Q8NDM7 1665 aa14.09□□□□□ -0.15
AMBRA1-212ENST00000534300 CLASP1Q7Z460 1538 aa14.09□□□□□ -0.15
AMBRA1-212ENST00000534300 PPIP5K1Q6PFW1 1433 aa14.09□□□□□ -0.15
AMBRA1-212ENST00000534300 IL2RBP14784 551 aa14.09□□□□□ -0.15
AMBRA1-212ENST00000534300 MAP2K1Q02750 393 aaPredicted RBP14.09□□□□□ -0.15
AMBRA1-212ENST00000534300 GOLGA6L9A6NEM1 432 aa14.08□□□□□ -0.15
AMBRA1-212ENST00000534300 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.15
AMBRA1-212ENST00000534300 CAMK4Q16566 473 aa14.08□□□□□ -0.15
AMBRA1-212ENST00000534300 NOL7Q9UMY1 257 aaKnown RBP14.08□□□□□ -0.15
AMBRA1-212ENST00000534300 ADCY5O95622 1261 aa14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 MNAT1P51948 309 aa14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 EIF5P55010 431 aaKnown RBP14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 KDM4AO75164 1064 aa14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 XRCC6P12956 609 aaKnown RBP eCLIP14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 BICDL1Q6ZP65 573 aa14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 STK11IPQ8N1F8 1099 aa14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms