RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 RTF1Q92541 710 aaKnown RBP11.89□□□□□ -0.51
COPB1-211ENST00000534234 SCN11AQ9UI33 1791 aa11.89□□□□□ -0.51
COPB1-211ENST00000534234 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 EIF5P55010 431 aaKnown RBP11.88□□□□□ -0.51
COPB1-211ENST00000534234 NFIXQ14938 502 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 FMNL2Q96PY5 1086 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
COPB1-211ENST00000534234 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 COL5A3P25940 1745 aaPredicted RBP11.88□□□□□ -0.51
COPB1-211ENST00000534234 COL15A1P39059 1388 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 CHD4Q14839 1912 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 KCNQ3O43525 872 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 MCM10Q7L590 875 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 ZNF526Q8TF50 670 aaPredicted RBP11.88□□□□□ -0.51
COPB1-211ENST00000534234 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
COPB1-211ENST00000534234 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
COPB1-211ENST00000534234 A0A087WZG4 1122 aa11.87□□□□□ -0.51
COPB1-211ENST00000534234 CHRNA5P30532 468 aa11.87□□□□□ -0.51
COPB1-211ENST00000534234 ZNF330Q9Y3S2 320 aaPredicted RBP11.87□□□□□ -0.51
COPB1-211ENST00000534234 TJP1Q07157 1748 aa11.87□□□□□ -0.51
COPB1-211ENST00000534234 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
COPB1-211ENST00000534234 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
COPB1-211ENST00000534234 A1BGP04217 495 aa11.86□□□□□ -0.51
COPB1-211ENST00000534234 SERPINB2P05120 415 aa11.86□□□□□ -0.51
COPB1-211ENST00000534234 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
COPB1-211ENST00000534234 DALRD3Q5D0E6 543 aaKnown RBP11.86□□□□□ -0.51
COPB1-211ENST00000534234 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
COPB1-211ENST00000534234 ADAMTS7Q9UKP4 1686 aa11.86□□□□□ -0.51
COPB1-211ENST00000534234 C4AP0C0L4 1744 aa11.85□□□□□ -0.51
COPB1-211ENST00000534234 NEFMP07197 916 aa11.85□□□□□ -0.51
COPB1-211ENST00000534234 IL6STP40189 918 aaPredicted RBP11.85□□□□□ -0.51
COPB1-211ENST00000534234 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
COPB1-211ENST00000534234 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
COPB1-211ENST00000534234 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
COPB1-211ENST00000534234 ADCY9O60503 1353 aa11.85□□□□□ -0.51
COPB1-211ENST00000534234 PPP4R3CPQ6ZMV5 832 aa11.84□□□□□ -0.51
COPB1-211ENST00000534234 SNRPA1P09661 255 aaKnown RBP11.84□□□□□ -0.51
COPB1-211ENST00000534234 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
COPB1-211ENST00000534234 TAF7Q15545 349 aaPredicted RBP11.84□□□□□ -0.51
COPB1-211ENST00000534234 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
COPB1-211ENST00000534234 TBC1D9BQ66K14 1250 aa11.83□□□□□ -0.52
COPB1-211ENST00000534234 MIS18AQ9NYP9 233 aa11.82□□□□□ -0.52
COPB1-211ENST00000534234 H0YIN7 160 aa11.81□□□□□ -0.52
COPB1-211ENST00000534234 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
COPB1-211ENST00000534234 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
COPB1-211ENST00000534234 DZIP3Q86Y13 1208 aaKnown RBP11.81□□□□□ -0.52
COPB1-211ENST00000534234 PLEKHF1Q96S99 279 aa11.81□□□□□ -0.52
COPB1-211ENST00000534234 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
COPB1-211ENST00000534234 CAMTA2O94983 1202 aa11.8□□□□□ -0.52
COPB1-211ENST00000534234 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
COPB1-211ENST00000534234 RALBP1Q15311 655 aa11.8□□□□□ -0.52
COPB1-211ENST00000534234 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
COPB1-211ENST00000534234 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
COPB1-211ENST00000534234 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
COPB1-211ENST00000534234 KIF13BQ9NQT8 1826 aa11.8□□□□□ -0.52
COPB1-211ENST00000534234 KIF3CO14782 793 aa11.79□□□□□ -0.52
COPB1-211ENST00000534234 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
COPB1-211ENST00000534234 BRIP1Q9BX63 1249 aa11.79□□□□□ -0.52
COPB1-211ENST00000534234 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
COPB1-211ENST00000534234 KIAA1551Q9HCM1 1747 aa11.79□□□□□ -0.52
COPB1-211ENST00000534234 PRR5LQ6MZQ0 368 aa11.79□□□□□ -0.52
COPB1-211ENST00000534234 CCDC24Q8N4L8 307 aa11.79□□□□□ -0.52
COPB1-211ENST00000534234 PNISRQ8TF01 805 aaKnown RBP11.79□□□□□ -0.52
COPB1-211ENST00000534234 MAPK8IP3Q9UPT6 1336 aa11.79□□□□□ -0.52
COPB1-211ENST00000534234 UBR2Q8IWV8 1755 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 NPHP1O15259 732 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 PDE6BP35913 854 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 NBPF10Q6P3W6 841 aaKnown RBP11.78□□□□□ -0.52
COPB1-211ENST00000534234 CLEC4GQ6UXB4 293 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.526e-21■□□□□ 8.9
COPB1-211ENST00000534234 THUMPD2Q9BTF0 503 aaKnown RBP11.78□□□□□ -0.52
COPB1-211ENST00000534234 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
COPB1-211ENST00000534234 CNBD1Q8NA66 436 aa11.77□□□□□ -0.53
COPB1-211ENST00000534234 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
COPB1-211ENST00000534234 NMRK2Q9NPI5 230 aa11.76□□□□□ -0.53
COPB1-211ENST00000534234 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
COPB1-211ENST00000534234 TOMM70O94826 608 aa11.75□□□□□ -0.53
COPB1-211ENST00000534234 RIPK4P57078 832 aa11.75□□□□□ -0.53
COPB1-211ENST00000534234 ST5P78524 1137 aa11.75□□□□□ -0.53
COPB1-211ENST00000534234 NBPF5PQ86XG9 351 aaPredicted RBP11.75□□□□□ -0.53
COPB1-211ENST00000534234 HSPA6P17066 643 aa11.75□□□□□ -0.53
COPB1-211ENST00000534234 LMNB1P20700 586 aa11.75□□□□□ -0.53
COPB1-211ENST00000534234 RASSF7Q02833 373 aa11.75□□□□□ -0.53
COPB1-211ENST00000534234 NGEFQ8N5V2 710 aa11.75□□□□□ -0.53
COPB1-211ENST00000534234 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
COPB1-211ENST00000534234 NIP7Q9Y221 180 aaKnown RBP eCLIP11.75□□□□□ -0.53
COPB1-211ENST00000534234 RRP7AQ9Y3A4 280 aaKnown RBP11.75□□□□□ -0.53
COPB1-211ENST00000534234 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
COPB1-211ENST00000534234 KDM2BQ8NHM5 1336 aa11.74□□□□□ -0.53
COPB1-211ENST00000534234 RGL2O15211 777 aa11.74□□□□□ -0.53
COPB1-211ENST00000534234 C21orf2O43822 256 aa11.74□□□□□ -0.53
COPB1-211ENST00000534234 TPTE2Q6XPS3 522 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms