RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 RREB1Q92766 1687 aa15.26■□□□□ 0.03
CTSC-209ENST00000534131 KCNQ3O43525 872 aa15.26■□□□□ 0.03
CTSC-209ENST00000534131 SLFN5Q08AF3 891 aa15.26■□□□□ 0.03
CTSC-209ENST00000534131 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
CTSC-209ENST00000534131 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
CTSC-209ENST00000534131 SOS1Q07889 1333 aaPredicted RBP15.25■□□□□ 0.03
CTSC-209ENST00000534131 STARD3NLO95772 234 aa15.25■□□□□ 0.03
CTSC-209ENST00000534131 R3HDM1Q15032 1099 aaKnown RBP15.25■□□□□ 0.03
CTSC-209ENST00000534131 NBPF14Q5TI25 921 aa15.25■□□□□ 0.03
CTSC-209ENST00000534131 TSR2Q969E8 191 aaKnown RBP15.25■□□□□ 0.03
CTSC-209ENST00000534131 COL5A3P25940 1745 aaPredicted RBP15.25■□□□□ 0.03
CTSC-209ENST00000534131 FANCIQ9NVI1 1328 aa15.24■□□□□ 0.03
CTSC-209ENST00000534131 TJP1Q07157 1748 aa15.24■□□□□ 0.03
CTSC-209ENST00000534131 HOXB7P09629 217 aa15.24■□□□□ 0.03
CTSC-209ENST00000534131 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
CTSC-209ENST00000534131 NUP188Q5SRE5 1749 aa15.23■□□□□ 0.03
CTSC-209ENST00000534131 GIGYF1O75420 1035 aaPredicted RBP15.22■□□□□ 0.03
CTSC-209ENST00000534131 DUSP27Q5VZP5 1158 aa15.22■□□□□ 0.03
CTSC-209ENST00000534131 DNAJC10Q8IXB1 793 aa15.22■□□□□ 0.03
CTSC-209ENST00000534131 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
CTSC-209ENST00000534131 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
CTSC-209ENST00000534131 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.03
CTSC-209ENST00000534131 EIF2S2P20042 333 aaKnown RBP15.21■□□□□ 0.03
CTSC-209ENST00000534131 EXOSC9Q06265 439 aaKnown RBP15.21■□□□□ 0.03
CTSC-209ENST00000534131 TWISTNBQ3B726 338 aaPredicted RBP15.21■□□□□ 0.03
CTSC-209ENST00000534131 AK7Q96M32 723 aa15.21■□□□□ 0.03
CTSC-209ENST00000534131 STK32BQ9NY57 414 aa15.21■□□□□ 0.03
CTSC-209ENST00000534131 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
CTSC-209ENST00000534131 PROM2Q8N271 834 aa15.2■□□□□ 0.02
CTSC-209ENST00000534131 USP16Q9Y5T5 823 aa15.2■□□□□ 0.02
CTSC-209ENST00000534131 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
CTSC-209ENST00000534131 CYP19A1P11511 503 aaPredicted RBP15.19■□□□□ 0.02
CTSC-209ENST00000534131 KCNQ4P56696 695 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 ITPK1Q13572 414 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 POLA2Q14181 598 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 CCDC30Q5VVM6 783 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
CTSC-209ENST00000534131 SLC4A9Q96Q91 983 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 LRRC4BQ9NT99 713 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
CTSC-209ENST00000534131 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
CTSC-209ENST00000534131 CNTNAP4Q9C0A0 1308 aa15.18■□□□□ 0.02
CTSC-209ENST00000534131 ABCB7O75027 752 aa15.18■□□□□ 0.02
CTSC-209ENST00000534131 CT47B1P0C2W7 299 aaPredicted RBP15.18■□□□□ 0.02
CTSC-209ENST00000534131 C8orf58Q8NAV2 365 aa15.18■□□□□ 0.02
CTSC-209ENST00000534131 LINC00116Q8NCU8 138 aa15.18■□□□□ 0.02
CTSC-209ENST00000534131 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
CTSC-209ENST00000534131 UBR3Q6ZT12 1888 aa15.18■□□□□ 0.02
CTSC-209ENST00000534131 LRP5O75197 1615 aa15.17■□□□□ 0.02
CTSC-209ENST00000534131 QSER1Q2KHR3 1735 aa15.17■□□□□ 0.02
CTSC-209ENST00000534131 CRKLP46109 303 aaKnown RBP15.17■□□□□ 0.02
CTSC-209ENST00000534131 KRT24Q2M2I5 525 aa15.17■□□□□ 0.02
CTSC-209ENST00000534131 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
CTSC-209ENST00000534131 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
CTSC-209ENST00000534131 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
CTSC-209ENST00000534131 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
CTSC-209ENST00000534131 PRAMEF22A3QJZ6 481 aa15.16■□□□□ 0.02
CTSC-209ENST00000534131 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
CTSC-209ENST00000534131 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 A0A087WZG4 1122 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 GNPATO15228 680 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 VAMP4O75379 141 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 RPS6KA4O75676 772 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 A1BGP04217 495 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 SLC15A2Q16348 729 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 NECTIN2Q92692 538 aa15.15■□□□□ 0.02
CTSC-209ENST00000534131 DBF4Q9UBU7 674 aaPredicted RBP15.15■□□□□ 0.02
CTSC-209ENST00000534131 ZNF330Q9Y3S2 320 aaPredicted RBP15.15■□□□□ 0.02
CTSC-209ENST00000534131 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
CTSC-209ENST00000534131 TRAPPC3LQ5T215 181 aa15.14■□□□□ 0.01
CTSC-209ENST00000534131 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
CTSC-209ENST00000534131 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
CTSC-209ENST00000534131 MYL6BP14649 208 aa15.13■□□□□ 0.01
CTSC-209ENST00000534131 SSFA2P28290 1259 aa15.13■□□□□ 0.01
CTSC-209ENST00000534131 INTS5Q6P9B9 1019 aaKnown RBP15.13■□□□□ 0.01
CTSC-209ENST00000534131 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
CTSC-209ENST00000534131 ARXQ96QS3 562 aa15.13■□□□□ 0.01
CTSC-209ENST00000534131 ZBTB1Q9Y2K1 713 aa15.13■□□□□ 0.01
CTSC-209ENST00000534131 ZPR1O75312 459 aa15.11■□□□□ 0.01
CTSC-209ENST00000534131 PHF14O94880 888 aa15.11■□□□□ 0.01
CTSC-209ENST00000534131 RFC4P35249 363 aa15.11■□□□□ 0.01
CTSC-209ENST00000534131 ALDH1L2Q3SY69 923 aa15.11■□□□□ 0.01
CTSC-209ENST00000534131 CHPF2Q9P2E5 772 aa15.11■□□□□ 0.01
CTSC-209ENST00000534131 COL15A1P39059 1388 aa15.11■□□□□ 0.01
CTSC-209ENST00000534131 DDX58O95786 925 aaKnown RBP15.1■□□□□ 0.01
CTSC-209ENST00000534131 DSG3P32926 999 aa15.1■□□□□ 0.01
CTSC-209ENST00000534131 ZNF827Q17R98 1081 aa15.1■□□□□ 0.01
CTSC-209ENST00000534131 KIF6Q6ZMV9 814 aa15.1■□□□□ 0.01
CTSC-209ENST00000534131 ANO8Q9HCE9 1232 aaPredicted RBP15.1■□□□□ 0.01
CTSC-209ENST00000534131 NUP98P52948 1817 aa15.09■□□□□ 0.01
CTSC-209ENST00000534131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.09■□□□□ 0.01
CTSC-209ENST00000534131 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
CTSC-209ENST00000534131 EIF5P55010 431 aaKnown RBP15.09■□□□□ 0.01
CTSC-209ENST00000534131 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
CTSC-209ENST00000534131 NBPF26B4DH59 902 aa15.08■□□□□ 0
CTSC-209ENST00000534131 TCERG1O14776 1098 aaKnown RBP15.08■□□□□ 0
CTSC-209ENST00000534131 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0
CTSC-209ENST00000534131 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms