RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 ZNF790Q6PG37 636 aa28.61■■■□□ 2.17
VPS51-214ENST00000534124 WWC3Q9ULE0 1092 aa28.61■■■□□ 2.17
VPS51-214ENST00000534124 ZBTB1Q9Y2K1 713 aa28.61■■■□□ 2.17
VPS51-214ENST00000534124 HEG1Q9ULI3 1381 aa28.6■■■□□ 2.17
VPS51-214ENST00000534124 ATP10DQ9P241 1426 aa28.6■■■□□ 2.17
VPS51-214ENST00000534124 FCHSD2O94868 740 aa28.59■■■□□ 2.17
VPS51-214ENST00000534124 DDR1Q08345 913 aa28.59■■■□□ 2.17
VPS51-214ENST00000534124 STARD3NLO95772 234 aa28.58■■■□□ 2.17
VPS51-214ENST00000534124 ZNF496Q96IT1 587 aaPredicted RBP28.58■■■□□ 2.17
VPS51-214ENST00000534124 NARFQ9UHQ1 456 aa28.58■■■□□ 2.17
VPS51-214ENST00000534124 DLG5Q8TDM6 1919 aa28.57■■■□□ 2.16
VPS51-214ENST00000534124 USPL1Q5W0Q7 1092 aa28.57■■■□□ 2.16
VPS51-214ENST00000534124 A0A0G2JLW4 131 aa28.56■■■□□ 2.16
VPS51-214ENST00000534124 GIGYF1O75420 1035 aaPredicted RBP28.56■■■□□ 2.16
VPS51-214ENST00000534124 TEX13AQ9BXU3 409 aaPredicted RBP28.56■■■□□ 2.16
VPS51-214ENST00000534124 DLEC1Q9Y238 1755 aa28.55■■■□□ 2.16
VPS51-214ENST00000534124 POLRMTO00411 1230 aaKnown RBP28.55■■■□□ 2.16
VPS51-214ENST00000534124 DPEP1P16444 411 aa28.55■■■□□ 2.16
VPS51-214ENST00000534124 TM4SF1P30408 202 aa28.54■■■□□ 2.16
VPS51-214ENST00000534124 C1QTNF8P60827 252 aa28.53■■■□□ 2.16
VPS51-214ENST00000534124 FMNL2Q96PY5 1086 aa28.53■■■□□ 2.16
VPS51-214ENST00000534124 BCS1LQ9Y276 419 aa28.53■■■□□ 2.16
VPS51-214ENST00000534124 BCORQ6W2J9 1755 aa28.52■■■□□ 2.16
VPS51-214ENST00000534124 BTBD11A6QL63 1104 aa28.51■■■□□ 2.15
VPS51-214ENST00000534124 CANXP27824 592 aaKnown RBP28.51■■■□□ 2.15
VPS51-214ENST00000534124 RTF1Q92541 710 aaKnown RBP28.51■■■□□ 2.15
VPS51-214ENST00000534124 A0A087WZG4 1122 aa28.5■■■□□ 2.15
VPS51-214ENST00000534124 EIF5P55010 431 aaKnown RBP28.5■■■□□ 2.15
VPS51-214ENST00000534124 HTATSF1O43719 755 aaKnown RBP28.49■■■□□ 2.15
VPS51-214ENST00000534124 KCNA3P22001 575 aa28.49■■■□□ 2.15
VPS51-214ENST00000534124 NFIXQ14938 502 aa28.49■■■□□ 2.15
VPS51-214ENST00000534124 LAMB4A4D0S4 1761 aa28.49■■■□□ 2.15
VPS51-214ENST00000534124 BCL2L12Q9HB09 334 aa28.48■■■□□ 2.15
VPS51-214ENST00000534124 PIM2Q9P1W9 311 aa28.47■■■□□ 2.15
VPS51-214ENST00000534124 IL6STP40189 918 aaPredicted RBP28.46■■■□□ 2.15
VPS51-214ENST00000534124 MCM10Q7L590 875 aa28.46■■■□□ 2.15
VPS51-214ENST00000534124 GPBP1L1Q9HC44 474 aaPredicted RBP28.46■■■□□ 2.15
VPS51-214ENST00000534124 KDM3BQ7LBC6 1761 aa28.46■■■□□ 2.15
VPS51-214ENST00000534124 NEFMP07197 916 aa28.45■■■□□ 2.14
VPS51-214ENST00000534124 KCNQ3O43525 872 aa28.44■■■□□ 2.14
VPS51-214ENST00000534124 ANKRD31Q8N7Z5 1873 aa28.44■■■□□ 2.14
VPS51-214ENST00000534124 DALRD3Q5D0E6 543 aaKnown RBP28.43■■■□□ 2.14
VPS51-214ENST00000534124 SERPINB2P05120 415 aa28.41■■■□□ 2.14
VPS51-214ENST00000534124 CHRNA5P30532 468 aa28.41■■■□□ 2.14
VPS51-214ENST00000534124 ARHGAP27Q6ZUM4 889 aa28.41■■■□□ 2.14
VPS51-214ENST00000534124 NPM2Q86SE8 214 aaKnown RBP28.41■■■□□ 2.14
VPS51-214ENST00000534124 ZNF330Q9Y3S2 320 aaPredicted RBP28.41■■■□□ 2.14
VPS51-214ENST00000534124 SBF1O95248 1867 aa28.4■■■□□ 2.14
VPS51-214ENST00000534124 DCTN1Q14203 1278 aa28.4■■■□□ 2.14
VPS51-214ENST00000534124 CARMIL3Q8ND23 1372 aa28.39■■■□□ 2.14
VPS51-214ENST00000534124 SENP3-EIF4A1A0A087X0R7 540 aa28.38■■■□□ 2.13
VPS51-214ENST00000534124 A1BGP04217 495 aa28.38■■■□□ 2.13
VPS51-214ENST00000534124 SNRPA1P09661 255 aaKnown RBP28.38■■■□□ 2.13
VPS51-214ENST00000534124 RALBP1Q15311 655 aa28.38■■■□□ 2.13
VPS51-214ENST00000534124 ZNF526Q8TF50 670 aaPredicted RBP28.38■■■□□ 2.13
VPS51-214ENST00000534124 PLEKHF1Q96S99 279 aa28.38■■■□□ 2.13
VPS51-214ENST00000534124 COL11A2P13942 1736 aaPredicted RBP28.38■■■□□ 2.13
VPS51-214ENST00000534124 PNNQ9H307 717 aaKnown RBP28.37■■■□□ 2.13
VPS51-214ENST00000534124 TBC1D2BQ9UPU7 963 aa28.37■■■□□ 2.13
VPS51-214ENST00000534124 TAF7Q15545 349 aaPredicted RBP28.36■■■□□ 2.13
VPS51-214ENST00000534124 BICDL1Q6ZP65 573 aa28.36■■■□□ 2.13
VPS51-214ENST00000534124 TBC1D9BQ66K14 1250 aa28.35■■■□□ 2.13
VPS51-214ENST00000534124 USP16Q9Y5T5 823 aa28.35■■■□□ 2.13
VPS51-214ENST00000534124 CAMTA2O94983 1202 aa28.34■■■□□ 2.13
VPS51-214ENST00000534124 NFE2L2Q16236 605 aa28.34■■■□□ 2.13
VPS51-214ENST00000534124 MAPK8IP3Q9UPT6 1336 aa28.34■■■□□ 2.13
VPS51-214ENST00000534124 PRAMEF22A3QJZ6 481 aa28.33■■■□□ 2.13
VPS51-214ENST00000534124 DZIP3Q86Y13 1208 aaKnown RBP28.32■■■□□ 2.12
VPS51-214ENST00000534124 PNISRQ8TF01 805 aaKnown RBP28.32■■■□□ 2.12
VPS51-214ENST00000534124 ARFGEF2Q9Y6D5 1785 aa28.32■■■□□ 2.12
VPS51-214ENST00000534124 PDZRN3Q9UPQ7 1066 aa28.3■■■□□ 2.12
VPS51-214ENST00000534124 H0YIN7 160 aa28.29■■■□□ 2.12
VPS51-214ENST00000534124 C9orf131Q5VYM1 1079 aa28.29■■■□□ 2.12
VPS51-214ENST00000534124 C2CD5Q86YS7 1000 aa28.29■■■□□ 2.12
VPS51-214ENST00000534124 SETDB2Q96T68 719 aa28.29■■■□□ 2.12
VPS51-214ENST00000534124 CACNA1SQ13698 1873 aa28.29■■■□□ 2.12
VPS51-214ENST00000534124 TNRC6CQ9HCJ0 1690 aaKnown RBP28.29■■■□□ 2.12
VPS51-214ENST00000534124 CEP350Q5VT06 3117 aa28.28■■■□□ 2.12
VPS51-214ENST00000534124 RGL2O15211 777 aa28.28■■■□□ 2.12
VPS51-214ENST00000534124 PIP4K2AP48426 406 aaPredicted RBP28.28■■■□□ 2.12
VPS51-214ENST00000534124 PRR5LQ6MZQ0 368 aa28.28■■■□□ 2.12
VPS51-214ENST00000534124 CLEC4GQ6UXB4 293 aa28.28■■■□□ 2.12
VPS51-214ENST00000534124 TTLL6Q8N841 843 aa28.28■■■□□ 2.12
VPS51-214ENST00000534124 BRIP1Q9BX63 1249 aa28.28■■■□□ 2.12
VPS51-214ENST00000534124 TIAM2Q8IVF5 1701 aa28.28■■■□□ 2.12
VPS51-214ENST00000534124 CCDC88AQ3V6T2 1871 aa28.27■■■□□ 2.12
VPS51-214ENST00000534124 MYBBP1AQ9BQG0 1328 aaKnown RBP28.27■■■□□ 2.12
VPS51-214ENST00000534124 PDE6BP35913 854 aa28.27■■■□□ 2.12
VPS51-214ENST00000534124 CNBD1Q8NA66 436 aa28.27■■■□□ 2.12
VPS51-214ENST00000534124 ZNF652Q9Y2D9 606 aa28.27■■■□□ 2.12
VPS51-214ENST00000534124 KIF3CO14782 793 aa28.26■■■□□ 2.11
VPS51-214ENST00000534124 DDX10Q13206 875 aaKnown RBP28.26■■■□□ 2.11
VPS51-214ENST00000534124 MIS18AQ9NYP9 233 aa28.26■■■□□ 2.11
VPS51-214ENST00000534124 NBPF26B4DH59 902 aa28.25■■■□□ 2.11
VPS51-214ENST00000534124 NBPF10Q6P3W6 841 aaKnown RBP28.25■■■□□ 2.11
VPS51-214ENST00000534124 NBPF15Q8N660 670 aa28.25■■■□□ 2.11
VPS51-214ENST00000534124 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
VPS51-214ENST00000534124 RNF181Q9P0P0 153 aa28.24■■■□□ 2.11
VPS51-214ENST00000534124 NUP98P52948 1817 aa28.24■■■□□ 2.11
VPS51-214ENST00000534124 ST5P78524 1137 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms