RNA–Protein interactions for RNA: ENST00000534001.1

APLP2-223, Transcript of amyloid beta precursor like protein 2, human

TSL 4

Gene APLP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APLP2-223	ENST00000534001	COL15A1	P39059	1388 aa		28.22	■■■□□ 2.11
APLP2-223	ENST00000534001	NRXN2	Q9P2S2	1712 aa		28.21	■■■□□ 2.11
APLP2-223	ENST00000534001	GNAT3	A8MTJ3	354 aa		28.21	■■■□□ 2.11
APLP2-223	ENST00000534001	PRKAR2B	P31323	418 aa		28.2	■■■□□ 2.1
APLP2-223	ENST00000534001	ZNF496	Q96IT1	587 aa	Predicted RBP	28.2	■■■□□ 2.1
APLP2-223	ENST00000534001	AFDN	P55196	1824 aa	Known RBP	28.2	■■■□□ 2.1
APLP2-223	ENST00000534001	NARF	Q9UHQ1	456 aa		28.19	■■■□□ 2.1
APLP2-223	ENST00000534001	BCS1L	Q9Y276	419 aa		28.19	■■■□□ 2.1
APLP2-223	ENST00000534001	ARFGEF1	Q9Y6D6	1849 aa		28.18	■■■□□ 2.1
APLP2-223	ENST00000534001	HEG1	Q9ULI3	1381 aa		28.17	■■■□□ 2.1
APLP2-223	ENST00000534001	ZNF790	Q6PG37	636 aa		28.17	■■■□□ 2.1
APLP2-223	ENST00000534001	SENP3-EIF4A1	A0A087X0R7	540 aa		28.16	■■■□□ 2.1
APLP2-223	ENST00000534001	NFIX	Q14938	502 aa		28.16	■■■□□ 2.1
APLP2-223	ENST00000534001	KCNQ3	O43525	872 aa		28.15	■■■□□ 2.1
APLP2-223	ENST00000534001	EIF5	P55010	431 aa	Known RBP	28.15	■■■□□ 2.1
APLP2-223	ENST00000534001	ZPR1	O75312	459 aa		28.13	■■■□□ 2.09
APLP2-223	ENST00000534001	CHRNA5	P30532	468 aa		28.13	■■■□□ 2.09
APLP2-223	ENST00000534001	TEF	Q10587	303 aa		28.13	■■■□□ 2.09
APLP2-223	ENST00000534001	ZNF526	Q8TF50	670 aa	Predicted RBP	28.13	■■■□□ 2.09
APLP2-223	ENST00000534001	CFAP53	Q96M91	514 aa		28.13	■■■□□ 2.09
APLP2-223	ENST00000534001	FCHSD2	O94868	740 aa		28.12	■■■□□ 2.09
APLP2-223	ENST00000534001	CANX	P27824	592 aa	Known RBP	28.12	■■■□□ 2.09
APLP2-223	ENST00000534001	TTC5	Q8N0Z6	440 aa		28.12	■■■□□ 2.09
APLP2-223	ENST00000534001	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.12	■■■□□ 2.09
APLP2-223	ENST00000534001	SCN7A	Q01118	1682 aa		28.12	■■■□□ 2.09
APLP2-223	ENST00000534001	CARMIL3	Q8ND23	1372 aa		28.11	■■■□□ 2.09
APLP2-223	ENST00000534001	KIF3C	O14782	793 aa		28.09	■■■□□ 2.09
APLP2-223	ENST00000534001	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.08	■■■□□ 2.09
APLP2-223	ENST00000534001	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.08	■■■□□ 2.09
APLP2-223	ENST00000534001	PIM2	Q9P1W9	311 aa		28.08	■■■□□ 2.09
APLP2-223	ENST00000534001	DLEC1	Q9Y238	1755 aa		28.08	■■■□□ 2.09
APLP2-223	ENST00000534001	STARD3NL	O95772	234 aa		28.07	■■■□□ 2.08
APLP2-223	ENST00000534001	ARHGAP27	Q6ZUM4	889 aa		28.07	■■■□□ 2.08
APLP2-223	ENST00000534001	NUDC	Q9Y266	331 aa		28.06	■■■□□ 2.08
APLP2-223	ENST00000534001	PRAMEF22	A3QJZ6	481 aa		28.05	■■■□□ 2.08
APLP2-223	ENST00000534001	A1BG	P04217	495 aa		28.05	■■■□□ 2.08
APLP2-223	ENST00000534001	SERPINB2	P05120	415 aa		28.05	■■■□□ 2.08
APLP2-223	ENST00000534001	MCM10	Q7L590	875 aa		28.05	■■■□□ 2.08
APLP2-223	ENST00000534001	FMNL2	Q96PY5	1086 aa		28.05	■■■□□ 2.08
APLP2-223	ENST00000534001	ANKRD31	Q8N7Z5	1873 aa		28.04	■■■□□ 2.08
APLP2-223	ENST00000534001	BTBD11	A6QL63	1104 aa		28.04	■■■□□ 2.08
APLP2-223	ENST00000534001	DCTN1	Q14203	1278 aa		28.04	■■■□□ 2.08
APLP2-223	ENST00000534001	DALRD3	Q5D0E6	543 aa	Known RBP	28.04	■■■□□ 2.08
APLP2-223	ENST00000534001	TBC1D9B	Q66K14	1250 aa		28.03	■■■□□ 2.08
APLP2-223	ENST00000534001	USP16	Q9Y5T5	823 aa		28.03	■■■□□ 2.08
APLP2-223	ENST00000534001	BCOR	Q6W2J9	1755 aa		28.02	■■■□□ 2.08
APLP2-223	ENST00000534001	IL6ST	P40189	918 aa	Predicted RBP	28.02	■■■□□ 2.08
APLP2-223	ENST00000534001	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.02	■■■□□ 2.08
APLP2-223	ENST00000534001	TBC1D2B	Q9UPU7	963 aa		28.01	■■■□□ 2.07
APLP2-223	ENST00000534001	SBF1	O95248	1867 aa		28.01	■■■□□ 2.07
APLP2-223	ENST00000534001	COL11A2	P13942	1736 aa	Predicted RBP	27.99	■■■□□ 2.07
APLP2-223	ENST00000534001		A0A087WZG4	1122 aa		27.99	■■■□□ 2.07
APLP2-223	ENST00000534001	CAMTA2	O94983	1202 aa		27.99	■■■□□ 2.07
APLP2-223	ENST00000534001	PIP4K2A	P48426	406 aa	Predicted RBP	27.99	■■■□□ 2.07
APLP2-223	ENST00000534001	C9orf131	Q5VYM1	1079 aa		27.99	■■■□□ 2.07
APLP2-223	ENST00000534001	DLG5	Q8TDM6	1919 aa		27.98	■■■□□ 2.07
APLP2-223	ENST00000534001	PRELP	P51888	382 aa		27.98	■■■□□ 2.07
APLP2-223	ENST00000534001	BICDL1	Q6ZP65	573 aa		27.98	■■■□□ 2.07
APLP2-223	ENST00000534001	PLEKHF1	Q96S99	279 aa		27.98	■■■□□ 2.07
APLP2-223	ENST00000534001	HTATSF1	O43719	755 aa	Known RBP	27.96	■■■□□ 2.07
APLP2-223	ENST00000534001	PRR5L	Q6MZQ0	368 aa		27.95	■■■□□ 2.06
APLP2-223	ENST00000534001	NMRK2	Q9NPI5	230 aa		27.95	■■■□□ 2.06
APLP2-223	ENST00000534001	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.95	■■■□□ 2.06
APLP2-223	ENST00000534001	NBPF26	B4DH59	902 aa		27.94	■■■□□ 2.06
APLP2-223	ENST00000534001	RASSF7	Q02833	373 aa		27.94	■■■□□ 2.06
APLP2-223	ENST00000534001	NBPF10	Q6P3W6	841 aa	Known RBP	27.94	■■■□□ 2.06
APLP2-223	ENST00000534001	NBPF15	Q8N660	670 aa		27.94	■■■□□ 2.06
APLP2-223	ENST00000534001	C2CD5	Q86YS7	1000 aa		27.93	■■■□□ 2.06
APLP2-223	ENST00000534001	CCDC24	Q8N4L8	307 aa		27.93	■■■□□ 2.06
APLP2-223	ENST00000534001	RTF1	Q92541	710 aa	Known RBP	27.93	■■■□□ 2.06
APLP2-223	ENST00000534001	KDM3B	Q7LBC6	1761 aa		27.93	■■■□□ 2.06
APLP2-223	ENST00000534001	SNRPA1	P09661	255 aa	Known RBP	27.91	■■■□□ 2.06
APLP2-223	ENST00000534001	HSPA6	P17066	643 aa		27.91	■■■□□ 2.06
APLP2-223	ENST00000534001	RNF181	Q9P0P0	153 aa		27.91	■■■□□ 2.06
APLP2-223	ENST00000534001	DZIP3	Q86Y13	1208 aa	Known RBP	27.9	■■■□□ 2.06
APLP2-223	ENST00000534001	MIS18A	Q9NYP9	233 aa		27.9	■■■□□ 2.06
APLP2-223	ENST00000534001	LAMB4	A4D0S4	1761 aa		27.89	■■■□□ 2.06
APLP2-223	ENST00000534001	NFKBIE	O00221	500 aa		27.88	■■■□□ 2.05
APLP2-223	ENST00000534001	TAF7	Q15545	349 aa	Predicted RBP	27.88	■■■□□ 2.05
APLP2-223	ENST00000534001	TTLL6	Q8N841	843 aa		27.88	■■■□□ 2.05
APLP2-223	ENST00000534001	BRIP1	Q9BX63	1249 aa		27.88	■■■□□ 2.05
APLP2-223	ENST00000534001	THUMPD2	Q9BTF0	503 aa	Known RBP	27.87	■■■□□ 2.05
APLP2-223	ENST00000534001		H0YIN7	160 aa		27.86	■■■□□ 2.05
APLP2-223	ENST00000534001	NFE2L2	Q16236	605 aa		27.85	■■■□□ 2.05
APLP2-223	ENST00000534001	TOMM70	O94826	608 aa		27.84	■■■□□ 2.05
APLP2-223	ENST00000534001	SETDB2	Q96T68	719 aa		27.83	■■■□□ 2.05
APLP2-223	ENST00000534001	FER1L6	Q2WGJ9	1857 aa		27.83	■■■□□ 2.04
APLP2-223	ENST00000534001	TIAM2	Q8IVF5	1701 aa		27.82	■■■□□ 2.04
APLP2-223	ENST00000534001	CLEC4G	Q6UXB4	293 aa		27.82	■■■□□ 2.04
APLP2-223	ENST00000534001	CNBD1	Q8NA66	436 aa		27.82	■■■□□ 2.04
APLP2-223	ENST00000534001	SLX4	Q8IY92	1834 aa		27.82	■■■□□ 2.04
APLP2-223	ENST00000534001	CCDC88A	Q3V6T2	1871 aa		27.82	■■■□□ 2.04
APLP2-223	ENST00000534001	PDE6B	P35913	854 aa		27.81	■■■□□ 2.04
APLP2-223	ENST00000534001	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.81	■■■□□ 2.04
APLP2-223	ENST00000534001	ARFGEF2	Q9Y6D5	1785 aa		27.81	■■■□□ 2.04
APLP2-223	ENST00000534001	EIF4A1	P60842	406 aa	Known RBP	27.8	■■■□□ 2.04
APLP2-223	ENST00000534001	SRGN	P10124	158 aa		27.79	■■■□□ 2.04
APLP2-223	ENST00000534001	LMNB1	P20700	586 aa		27.79	■■■□□ 2.04
APLP2-223	ENST00000534001	HLF	Q16534	295 aa		27.79	■■■□□ 2.04
APLP2-223	ENST00000534001	ZNF622	Q969S3	477 aa	Known RBP eCLIP	27.79	■■■□□ 2.04	8e-9	■■■■■ 27.5

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms